mRNA_E_fasciculatus_S2_contig6905.15043.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6905.15043.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM75_9PHAE) HSP 1 Score: 219 bits (558), Expect = 1.200e-67 Identity = 103/118 (87.29%), Postives = 108/118 (91.53%), Query Frame = 1
Query: 1 MSNPVTQPDIVFRLKEFVGGEQYLFFAGVSRTWRDAWEGHPTTTRAVTADTTMPQLSQSFECGLAPRRTVCRDIAALGRLDLLVSAREQHECAWDEDTCSYASENGHGDVLRWAFANG 354
M NP+ QPDIVFRL EFVGGEQY+FFAGVSRTWRDAWEG PTTTRA TADT +PQLSQSF+CGLAPR TVCRDIAALGRLDLLVSAREQHEC WDE+TCS ASENGH DVLRWAFANG
Sbjct: 1 MPNPLMQPDIVFRLMEFVGGEQYIFFAGVSRTWRDAWEGRPTTTRAFTADTGVPQLSQSFKCGLAPRSTVCRDIAALGRLDLLVSAREQHECPWDEETCSCASENGHADVLRWAFANG 118
BLAST of mRNA_E_fasciculatus_S2_contig6905.15043.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W5_ECTSI) HSP 1 Score: 198 bits (503), Expect = 5.870e-59 Identity = 93/103 (90.29%), Postives = 97/103 (94.17%), Query Frame = 1
Query: 46 EFVGGEQYLFFAGVSRTWRDAWEGHPTTTRAVTADTTMPQLSQSFECGLAPRRTVCRDIAALGRLDLLVSAREQHECAWDEDTCSYASENGHGDVLRWAFANG 354
EFVGGEQYLFFAGVSRTWRDAWEG PTTTRAVTADT +PQLSQSFECGLA R TVC+DIAALGRLDLLVSARE++EC WDEDTCSYASENGH DVLRWAFANG
Sbjct: 2 EFVGGEQYLFFAGVSRTWRDAWEGRPTTTRAVTADTGVPQLSQSFECGLARRSTVCQDIAALGRLDLLVSAREEYECPWDEDTCSYASENGHADVLRWAFANG 104
BLAST of mRNA_E_fasciculatus_S2_contig6905.15043.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0J7_9PHAE) HSP 1 Score: 107 bits (268), Expect = 1.390e-24 Identity = 54/91 (59.34%), Postives = 62/91 (68.13%), Query Frame = 1
Query: 25 DIVFRLKEFVGGEQYLFFAGVSRTWRDAWEGHPTTTRAVTADTTMPQLSQSFECGLAPRRTVCRDIAALGRLDLLVSAREQHECAWDEDTC 297
DIV + EFV QYLFFA VSR WRD W PT T+A+TADT++PQLS SFECGL VC +A LGRLDLL AR C W+E+TC
Sbjct: 8 DIVSTVAEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMG-CQWNENTC 97
BLAST of mRNA_E_fasciculatus_S2_contig6905.15043.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V2_ECTSI) HSP 1 Score: 109 bits (272), Expect = 1.420e-23 Identity = 55/93 (59.14%), Postives = 66/93 (70.97%), Query Frame = 1
Query: 19 QPDIVFRLKEFVGGEQYLFFAGVSRTWRDAWEGHPTTTRAVTADTTMPQLSQSFECGLAPRRTVCRDIAALGRLDLLVSAREQHECAWDEDTC 297
Q D+ L EFV EQ+LFFAGV R W++AW P TTRAVT DTT+ QLSQ+F+CGL+ VC +A LGRLDLL AR +H CAW+E TC
Sbjct: 8 QSDVASCLVEFVDYEQFLFFAGVCRAWKEAWGQRPPTTRAVTEDTTVAQLSQNFQCGLSLIADVCTSVAKLGRLDLLQCAR-RHGCAWNEVTC 99
BLAST of mRNA_E_fasciculatus_S2_contig6905.15043.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K8_9PHAE) HSP 1 Score: 103 bits (256), Expect = 2.300e-22 Identity = 51/86 (59.30%), Postives = 59/86 (68.60%), Query Frame = 1
Query: 40 LKEFVGGEQYLFFAGVSRTWRDAWEGHPTTTRAVTADTTMPQLSQSFECGLAPRRTVCRDIAALGRLDLLVSAREQHECAWDEDTC 297
L EFV Q+LFFA VSR WRD W PT T+A+TADT++PQLS SFECGL VC +A LGRLDLL AR C W+E+TC
Sbjct: 31 LAEFVDDNQHLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRTAAVCETVAGLGRLDLLQRARAMG-CPWNENTC 115
BLAST of mRNA_E_fasciculatus_S2_contig6905.15043.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS7_ECTSI) HSP 1 Score: 104 bits (259), Expect = 2.820e-22 Identity = 53/91 (58.24%), Postives = 61/91 (67.03%), Query Frame = 1
Query: 25 DIVFRLKEFVGGEQYLFFAGVSRTWRDAWEGHPTTTRAVTADTTMPQLSQSFECGLAPRRTVCRDIAALGRLDLLVSAREQHECAWDEDTC 297
DIV + EFV QYLFFA VSR WRD W PT T+A+TADT++ QLS SFECGL VC +A LGRLDLL AR C W+E+TC
Sbjct: 10 DIVSTVGEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVSQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMG-CPWNENTC 99
BLAST of mRNA_E_fasciculatus_S2_contig6905.15043.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDD9_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 5.440e-20 Identity = 53/101 (52.48%), Postives = 65/101 (64.36%), Query Frame = 1
Query: 1 MSNPV-TQPDIVFRLKEFVGGEQYLFFAGVSRTWRDAWEGHPTTTRAVTADTTMPQLSQSFECGLAPRRT-VCRDIAALGRLDLLVSAREQHECAWDEDTC 297
M NP D++ EFV +Q+LFFA VSR WR AW G PT+TRA+T DT+ QL S +CGL+P T VC IA+LGRLDLL +AR WD+ TC
Sbjct: 1 MGNPFQATADVISHASEFVHDDQFLFFASVSRAWRGAWRGRPTSTRAITPDTSPSQLRHSVDCGLSPGGTAVCTAIASLGRLDLLRAARALG-FRWDKMTC 100
BLAST of mRNA_E_fasciculatus_S2_contig6905.15043.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH49_ECTSI) HSP 1 Score: 75.1 bits (183), Expect = 1.100e-11 Identity = 50/102 (49.02%), Postives = 57/102 (55.88%), Query Frame = 1
Query: 13 VTQPDIVFRLKEFVGGEQYLFFAGVSRTWRDAWEGHPTTTRAVTADTTMPQLSQSFECGLAPRRTV--CRDIAALGRLDLLVSAREQHECAWDEDTCSYASE 312
+T DIV L +FV +Q+LFFA VSR+WRDAW T T VT TT QL SF CGLA R V C A G LDLL A EQ C W + A+E
Sbjct: 20 MTNMDIVHGLAQFVLDKQFLFFAAVSRSWRDAWGERATVTSWVTPHTTPFQLQYSFACGLA-RDGVDWCLTTARAGNLDLLRWATEQG-CPWTRSLSAAAAE 119
BLAST of mRNA_E_fasciculatus_S2_contig6905.15043.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ6_9PHAE) HSP 1 Score: 73.9 bits (180), Expect = 1.200e-11 Identity = 45/96 (46.88%), Postives = 58/96 (60.42%), Query Frame = 1
Query: 25 DIVFRLKEFVGGEQYLFFAGVSRTWRDAWEGHPTTTRAVTADTTMPQLSQSFECGLA-PRRTVCRDIAALGRLDLLVSAREQHECAWDEDTCSYAS 309
D++ + FV +Q+LFFA VSR WR+AW P T VT D+++ QL SFE GL R +C IA LG L+LL SAR CAW+ T S A+
Sbjct: 62 DLLRSIVRFVAEKQFLFFAPVSRAWREAWGCRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSG-CAWNGLTFSEAA 156 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6905.15043.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig6905.15043.1 >prot_E_fasciculatus_S2_contig6905.15043.1 ID=prot_E_fasciculatus_S2_contig6905.15043.1|Name=mRNA_E_fasciculatus_S2_contig6905.15043.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=285bp MSNPVTQPDIVFRLKEFVGGEQYLFFAGVSRTWRDAWEGHPTTTRAVTADback to top mRNA from alignment at E_fasciculatus_S2_contig6905:4565..5419- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig6905.15043.1 ID=mRNA_E_fasciculatus_S2_contig6905.15043.1|Name=mRNA_E_fasciculatus_S2_contig6905.15043.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=855bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6905:4565..5419- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6905:4565..5419- >mRNA_E_fasciculatus_S2_contig6905.15043.1 ID=mRNA_E_fasciculatus_S2_contig6905.15043.1|Name=mRNA_E_fasciculatus_S2_contig6905.15043.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=855bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6905:4565..5419- (Ectocarpus fasciculatus EfasUO2)back to top |