mRNA_E_fasciculatus_S2_contig69.15026.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig69.15026.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQD1_9PHAE) HSP 1 Score: 720 bits (1858), Expect = 4.400e-257 Identity = 385/421 (91.45%), Postives = 393/421 (93.35%), Query Frame = 1
Query: 1 MRLSAHRRYGIGITLLLVVLMIAVSLVSMESTDNTIMCLPTNQLVVLCLSAMSYDAQESSFDLSAEALASIADLDDHPIEDNDAARADRMLAALESIPEGERQGMDLDVEALRSKPLAERLAELQGLWEVRQQELREAYDAMPKVNELLMERIDILNNAYATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLALLLENAMAATTPTLRSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADGSDRRVRMKTLTLMSDLLQEAARGSPAAVLATVPVGSTASSGGAWCRRVDEALQHAHSPAALEKAIEAVQSFTPSCRDQFAQLETKRRLEGLAQQCRTSPPEGFEVAEEEFHKELTQKLEECAVALR 1263
MRLSAHRRYG+GI L L+VLMIA+S VSMESTD+TIM P FDLS EALASIADLDDHPIEDNDAARADRMLAALESIPEGERQGMDLD EALRSKPLAERLAELQGLWEVRQQELREAYDAMPKVNELLMERIDILNNA ATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLALLLENAMAATTPTLRSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADGSDRRVR+KTLTLMSDLLQEAARGSPAAVLAT+PVGSTASSGGAWCRRVDEALQHAHSPAALEKAIEAVQSFTPSCRDQFAQL+TKRRLEGLAQQCRTSPPEGFEVAEEE+HKELTQKLEECAVALR
Sbjct: 1 MRLSAHRRYGVGIALWLMVLMIAMSSVSMESTDDTIMWSP--------------------FDLSTEALASIADLDDHPIEDNDAARADRMLAALESIPEGERQGMDLDAEALRSKPLAERLAELQGLWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLALLLENAMAATTPTLRSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADGSDRRVRIKTLTLMSDLLQEAARGSPAAVLATMPVGSTASSGGAWCRRVDEALQHAHSPAALEKAIEAVQSFTPSCRDQFAQLDTKRRLEGLAQQCRTSPPEGFEVAEEEYHKELTQKLEECAVALR 401
BLAST of mRNA_E_fasciculatus_S2_contig69.15026.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7K3_9STRA) HSP 1 Score: 147 bits (372), Expect = 2.140e-34 Identity = 124/384 (32.29%), Postives = 170/384 (44.27%), Query Frame = 1
Query: 208 SIADLDDHPIEDNDAARADRMLAALESIPEGERQGMDLDVEALRSKPLAERLAELQGLWEVRQQELREAYDAMPKVNELLMERIDILNNAYATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGP----DSQPSV-----------------------------------------------------LALLLENAMAATTPTLRSKVVYALSACLTNNGDVQLQFGSRMG-----EAVLSAMYDADGSDRRVRMKTLTLMSDLLQEAAR--GSPAAVLATVPVGSTASSGGAWCRRVDEALQHAHSPAA---LEKAIEAVQSFTPSCRDQFAQLETKRRLEGL 1158
SI +DDHP++D AR RML AL +P E++ M LD A+ + +ER LQ LWE RQ EL+E Y MP ++L I IL + + D L AL DLED LSD+DMARDFHT+GG+ L ++L R VRE AAW +GTAVKN E W LE GP D+ SV + LLE A L+ K +YAL++ L +N Q F + G A +A D + R + K +TL+SD++ + A GS +A WC + L A + LE+A++A P C + A + + RL +
Sbjct: 98 SIRGIDDHPVQDTPEARTQRMLEALLELPREEQERMQLD--AILALDPSERPPALQALWERRQAELKEIYAGMPTPAKILGSLIAILRSEASGDAVLLDALLDLEDHLSDVDMARDFHTLGGWHPLQALLHAERAPAVREHAAWVIGTAVKNVIEFHGWALETGPAAAADASESVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAVAGAGDGLNAIDRLLECVADARHAGLQGKALYALASALRHNARAQAHFVTTGGLDALRNAAATAADDGGAAARGLLTKAITLVSDIVADEAHEEGSGGGAVAAGVARDER-----WCVLLHALLLRADAARGGTQLERALDAALVLAPLCGARPAGVALEARLAAM 474
BLAST of mRNA_E_fasciculatus_S2_contig69.15026.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9J5_9STRA) HSP 1 Score: 123 bits (309), Expect = 7.380e-27 Identity = 88/250 (35.20%), Postives = 130/250 (52.00%), Query Frame = 1
Query: 370 LQGLWEVRQQELREAYDAMPKVNELLMERIDILNNAYATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLE----DGPDSQPSVLALLLENAM--AATTPTLRSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADGSDRRVRMKTLTLMSDLLQEAARGSPAAVLATVPVGSTASSGGA----WCRRVDEALQHAHSPAALEKAIEAV 1089
+ G+W+ RQQ+LREA ++M + +ERI +L+ A +++ + L LED L DIDMARDFHT+GG+P L +L S E VR AA VG V+N PE Q WV E D + + + LL + M +A+T +SK + ALS L N+ + F G A L A+ D D + R+ ++ + ++SDL EAA + + GG WCRR ++ A ++ EAV
Sbjct: 134 IDGIWQKRQQDLREAIESMGSHVNIFLERIMVLSAADSSEEDVMKVLLQLEDDLMDIDMARDFHTVGGWPALTGLLADSHAEDVRCQAALVVGNTVRNTPEFQAWVSEVPMGSAADVEEATMMHLLVSMMNSSASTAKEQSKALSALSGALYNHVENLQLFADLDGSAKLLALLD-DAVEDRLSLRAIRIVSDLAFEAAESGDEELKGLL--------GGIFDARWCRRTEDLASAAKGAGTDDRLSEAV 374
BLAST of mRNA_E_fasciculatus_S2_contig69.15026.1 vs.
Match: Armadillo-like (helical n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQS8_9STRA) HSP 1 Score: 102 bits (254), Expect = 3.980e-19 Identity = 117/385 (30.39%), Postives = 156/385 (40.52%), Query Frame = 1
Query: 253 ARADRMLAALESIPEGERQGMDLDVEALRSKP-----LAERLAE-------------LQGLWEVRQQELREAYDAMPKVNELLMERIDILNNAYATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRP-EGVREL---AAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLALLLENAMAATTPT---------LRSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAM------------YDADGSDRRVRMKTLTLMSDLLQEA------------ARGSPAAVLATVPVGSTASSGGAWCRRVDEALQHA------HSPAALEKAIEAVQSFTPSCRDQFAQLETKRRLEGLAQQCRTSPPEGFEVAEEEFHKE 1224
+R ML L +P ER M +D L S+P L E + E ++ LW RQ L +AY+ M K E L I +L + + AL +LED LSD+DMA+DF+T+GG+P L S L EG RE+ AAW VG AVKN+ Q WVLE G + S L LL T L K VYA+++ N VQ + G VL + + G R + +K + DL EA AR P+ + AWC + L+ ALE +EA+Q C Q E R +E L ++ R EV EEE KE
Sbjct: 174 SRRGTMLKVLSGLPPQERASMGID-SLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEELGRLIGVLKEGGEEE--VMRALMELEDWLSDVDMAQDFYTLGGWPLLVSKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALTRLLTICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQAVAAALEVAEARHPPSIXXXXXXXLLAGVTSPAWCEGILGLLEEVVGGEGGREARALEGVLEAMQLLHVDCVRQGRWEEGGREVERLLRRAR-------EVVEEEDWKE 548
BLAST of mRNA_E_fasciculatus_S2_contig69.15026.1 vs.
Match: Hypothetical (protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J9D3_9EUKA) HSP 1 Score: 91.7 bits (226), Expect = 4.750e-16 Identity = 66/161 (40.99%), Postives = 90/161 (55.90%), Query Frame = 1
Query: 466 LNNAYATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLALLLENAMAATTPTLRSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADGSDRRVRMKTLTLMSDLLQEAA 948
LN + A D AL L++L+ D+D ARDF TIGGF + +L PE V AW VGTAV+N+ E QL +LE ++A LL+ + +R+KV+YA+S L N + QL F R G +VL D S R +R K L L++DLL E+A
Sbjct: 159 LNRSLAAD-VREEALFALQELVEDLDNARDFMTIGGFKQVMELLGSDTPELVAA-TAWVVGTAVQNQRELQLHMLEL------ELMAPLLQLLHDHSAIDVRAKVLYAVSGLLRNCPEAQLDFRRRQGVSVLVMTLARDSSPRLMR-KALVLLTDLLSESA 310
BLAST of mRNA_E_fasciculatus_S2_contig69.15026.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJU1_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 7.760e-16 Identity = 68/206 (33.01%), Postives = 105/206 (50.97%), Query Frame = 1
Query: 370 LQGLWEVRQQELREAYDAMPKVNELLMERIDILNNAYATDGALTGALTDLEDLLSDIDMARDFHT-IGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDS-----QPSVLAL-----LLENAMAATTPTLRSKVVYALSACLTNNGDVQLQF----GSRMGEAVLSAMYDADGSDRRVRMKTLTLMSDLLQE 942
L+ LWE RQ+EL+ A +AM + + L I + + + ++ AL DLE+ LSD+DMARD H +GG+P L +L + +R AA +GTA+KNEP Q W+LE +S Q + AL +LE + + +YAL++ L +N Q F G +A+L D + + K L+ D+L+E
Sbjct: 121 LKVLWEQRQEELKAAMEAMQEAADTLSSIIRQIRSG--DEESVEAALADLEEHLSDVDMARDLHNALGGWPPLVRLLSSDQSPRIRAGAALVIGTAIKNEPVFQSWILESAAESVDVNPQQNETALSSLLGMLEEQGTGDVQVMHRRSMYALASALRHNLRNQAAFMELGGLERLQALLVKSCDGGLENPALVSKLAALVFDVLEE 324
BLAST of mRNA_E_fasciculatus_S2_contig69.15026.1 vs.
Match: Hypothetical (protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UMA0_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 4.640e-15 Identity = 69/220 (31.36%), Postives = 110/220 (50.00%), Query Frame = 1
Query: 355 ERLAELQGLWEVRQQELREAYDAMPKVNELLMERIDILNNAYATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLED------------GPDSQPSVLALLLENAM---AATTPTLRSKVVYALSACLTN---NGDVQLQFGSRMG-EAVLSAMYDADGSDRRVRMKTLTLMSDLLQEAARGS 957
+R+AE+ W RQ +L+ A +++ + + + +L + A+ L L + + L D+D+A DFH++GG+P +A++L PEGVR AA + +V+N PE Q WV D G D V AL L M +++TP + K ++ALSA L N N D L G AVL+ A D ++ + + + +DL EAA +
Sbjct: 198 DRVAEV---WRKRQVDLKAAMESVADTHSIFTGYLGVLQDPAASAEELVAMLDVVAEQLMDVDLANDFHSMGGWPIVAALLAEEHPEGVRAAAAAVIADSVRNVPEFQGWVGVDKLGRLEVVGDDAGGDGSGEVTALDLLTDMFSSSSSTPKEQQKALFALSAALYNHPANLDKFLDLGGAAKLSAVLAPPEGAPKQDSKLIQRAINIAADLAFEAAESA 414
BLAST of mRNA_E_fasciculatus_S2_contig69.15026.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M316_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 4.640e-15 Identity = 56/122 (45.90%), Postives = 70/122 (57.38%), Query Frame = 1
Query: 508 LTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLAL------LLENAMAATTPT----------LRSKVVYALSACLTNNGDVQ 825
L LE LL D+D ARDFHTIGG+PTL S L+ S+P VR +AA AVGTA+KN ++QLW LE S AL LL A+ + T L+ + +YALSA + N DVQ
Sbjct: 215 LRQLESLLDDVDNARDFHTIGGWPTLLSHLKASQPLQVRSVAALAVGTAIKNTYDYQLWTLESPASSTTDSGALVVSGLDLLIEALGTSENTAEEIASDRFELQKRALYALSAAMRGNMDVQ 336
BLAST of mRNA_E_fasciculatus_S2_contig69.15026.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHY2_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 5.620e-15 Identity = 89/290 (30.69%), Postives = 130/290 (44.83%), Query Frame = 1
Query: 268 MLAALESIPEGERQGMDLDVEALRSKPLAERL--AELQGLWEVRQQELREAYDAMPKVNELLMERIDILNNAY----ATDGALTGALTDLEDLLSDIDMARDFH-TIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDS------------QPSVLALLLENAMAATT-------------------PTL-----------RSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADG----SDR-----------RVRMKTLTLMSDLLQEA 945
M+ L ++P E+ + +SK E A+L+ LWEVRQ EL EA A + + L I L + A D + AL LED LSD+DMARDFH +GG+P+L ++L ++ VR AA +GTAVKN+ E Q W+LE S + + LALL + T PTL R K +YA+++ + N Q F S G + L DA+ SD+ ++R+K T+++D + EA
Sbjct: 52 MIRTLSALPVVEQDRIGFTALMDKSKASGEEALEADLRSLWEVRQVELEEAMAATEESADFLAALIKTLKSHVDSNSADDETVLDALNGLEDHLSDMDMARDFHDALGGWPSLTNLLLPTQSLQVRAAAALVMGTAVKNQDEFQGWILEPVALSLSTDTTSEEHMHEEAALALLTHMLVKGCTXXXXXXXXGTTTSVTLCNEPTLEESDPVGALAMRKKALYAIASGIRQNPHTQSLFLSLDGLSRLEHAADAEAEFAASDKHKKRPDHSSLWQLRLKLATMLADWITEA 341
BLAST of mRNA_E_fasciculatus_S2_contig69.15026.1 vs.
Match: Hypothetical (protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LLH1_9EUKA) HSP 1 Score: 85.5 bits (210), Expect = 4.990e-14 Identity = 65/163 (39.88%), Postives = 87/163 (53.37%), Query Frame = 1
Query: 460 DILNNAYATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLALLLENAMAATTPTLRSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADGSDRRVRMKTLTLMSDLLQEAA 948
D LN + D AL L++L+ D+D A+DF IGGF + +L P V +A W VGTAV+N+ E QL +LE ++A LL+ A T +R+K +YALS L N + QLQF G VL AD S R+ K L L++DLL E A
Sbjct: 159 DALNASLELD-VREEALLALQELVEDLDNAKDFMAIGGFKQVMELLGSETPALVAGVA-WIVGTAVQNQRELQLQMLEL------HLMAPLLQLLHAHTAAEVRTKALYALSGLLRNCAEAQLQFKQGEGVGVLLRTL-ADVSSPRLVRKALVLLTDLLAERA 312 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig69.15026.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig69.15026.1 >prot_E_fasciculatus_S2_contig69.15026.1 ID=prot_E_fasciculatus_S2_contig69.15026.1|Name=mRNA_E_fasciculatus_S2_contig69.15026.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=422bp MRLSAHRRYGIGITLLLVVLMIAVSLVSMESTDNTIMCLPTNQLVVLCLSback to top mRNA from alignment at E_fasciculatus_S2_contig69:25693..29194- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig69.15026.1 ID=mRNA_E_fasciculatus_S2_contig69.15026.1|Name=mRNA_E_fasciculatus_S2_contig69.15026.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3502bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig69:25693..29194- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig69:25693..29194- >mRNA_E_fasciculatus_S2_contig69.15026.1 ID=mRNA_E_fasciculatus_S2_contig69.15026.1|Name=mRNA_E_fasciculatus_S2_contig69.15026.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1266bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig69:25693..29194- (Ectocarpus fasciculatus EfasUO2)back to top |