mRNA_E_fasciculatus_S2_contig69.15023.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig69.15023.1 vs.
Match: GRIP (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L3B9_9PHAE) HSP 1 Score: 1407 bits (3641), Expect = 0.000e+0 Identity = 857/1047 (81.85%), Postives = 887/1047 (84.72%), Query Frame = 1
Query: 1 MFSGFDNFAEGFKRFSLDALQDQDDENATEKDEQKRLPAVPEQQHPTEHTESPTENPPXXXXXXXXXXXXXXXXNAGATDAQRKGVSGSQQRHGGAHFQNSPQAMSIAHAGISPAAVASPSELDQQSTFDGQPGGVLVEAEEPSRGNTGTQAAEEHMEERREGQMVCGEKHSGPSSTLARDSSAPLSFVEEGFSDKTDTPAALGRSETYSRTIEDGTEDVHVGDARTLDPSSSGKLQNALEGSKP-------LATDEGEATNTTNDSSASGPTGTDGGGERRVDHQENGESIEAGSSPQQSAEAATAGAAGTALVVEPAKDTTTADPLTVVAMRQELSLVKNAASGLEGALRESRSEVQLLRELLATEQDTTRKLSDEVNATRMGFQESNAAHQRTAEQSHALEEELYNTRKVVESLRAESAAFKAKVDEGVEDRHALEGKLRHLQAGLTEGQEAARQEGRQEAERLEARIRDLLKDRDRKQAELELQNARRKETXXMARDLESQLAAVERIAQEREVELSKQRDDMVALKKNTGEATDQKKTWATKYEALERNFKQVRAQSKRIESELXXXXXXXXXXXXXKAVLEERVEVEGAERVTVVASVSQERDFLLRQASISAQNSGVDRLEQEVVELRLSQEAQATAAAARAQTTGVLEEYRTRAQQALKRANEITSQTASENKRLEAEMSKLADEVAQQRPLWEKSKQQEEVHRAEVAELKEKIATQVTELDNMATAAAALEAQVSEKEEERRDAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENRQRRKHSPEKDDVNADMGKNLSSPTPAVSSLSMGWDEEKHGSRSGTPRRGMGTEAAGAAWPERRSLGESVSSMPSEADSADVAQGSVGEQLFYVHQLRERMSKEQIEMRSLISELEASRAAADAQAAKQAQLEKQLEAALLDKKRLQDLDSGRNAAINLEYLKNCVVGALRTSEPSEHARLLPVITTILKLSEDEAAVIAKNISTRAQHQGSFGGSLPPGGXXXXXXXXXXXXXX-SSNPQNK 3117
MFSGFDNFAEGFKRFSLDALQDQD+ T KDEQ+RLPA+PEQQHP EHTESPT+ PP +AGAT+AQR GV G +Q+HG AH +NSP A S+A AGISPAAVASPSELDQ STFD Q GGV+VEAEE R N GTQAA+E MEERREGQM GE +SGPS TLARDSSAP S VEEGFSD TDTPAALGRSE TI+DGTED+H+G+A T DPSSSGKLQ+ LEGSKP LA DEG ATNTTNDSSA GPT T+ GGERRVDHQEN E I+ GSSPQ+S EAATAGAAGTA VV+PA+DTTTADPLTVVAMRQELSLVKNAASGLEGALRESRSEVQLLRELLATEQDTTRKLSDEVNATRMGFQESNAAHQRTAEQSHALEEELYN R +VESLRAESAA KAKVDEGVEDRHALEGKLRHLQAG+TEGQEAARQEGRQE ERLEARIRDLLKDRDRKQAEL+LQNARRKET MARDLESQLAAVERIAQEREVELSKQRDDMVALKKNTGEATDQKKTWATKYEALERNFKQVRAQS RIESEL KAVLEERVEVEGAERVTVVASVSQERDFLLRQA VDRLEQEVVELR SQEAQATAAAARAQTTGVLEEYRTRAQQALKRANEITSQTASENKRL+AEM KL+DEVAQQRPLWE+SKQ EEVHRAEVAELKEKIA Q TEL NMA AAAALEAQV EKEEERRDAH ENRQRRKHSPEK DVNADMGKNLSSPTPAVSSLSMGWDEEKHGSR+GTPRRGMGTEA GAAWPERRSLGESVSSMPSEADSADVAQGSVGEQLFYVHQLRERMSKEQIEMRSLISELEASRAAADAQAAKQAQLEKQLEAALLDKKRLQDLDSGRNAAINLEYLKNCVVGALRTSEPSEHARLLPVITTILKLSEDEAAVIAKNISTRAQHQGSFGGSLPPGG XXXXXXXXXXX SSNPQ K
Sbjct: 1 MFSGFDNFAEGFKRFSLDALQDQDEN--TSKDEQQRLPALPEQQHPMEHTESPTKEPPPQLAEVEDNEWDWDHGHAGATNAQRDGVGGLRQKHG-AHVRNSPHATSVAPAGISPAAVASPSELDQ-STFDEQAGGVVVEAEEALRENAGTQAAKEGMEERREGQMFGGETNSGPS-TLARDSSAPSSSVEEGFSDNTDTPAALGRSEPCIGTIQDGTEDIHLGNAPTPDPSSSGKLQDFLEGSKPAAAKAIGLAIDEGVATNTTNDSSAEGPTDTNWGGERRVDHQENAERIQDGSSPQKSPEAATAGAAGTA-VVKPAEDTTTADPLTVVAMRQELSLVKNAASGLEGALRESRSEVQLLRELLATEQDTTRKLSDEVNATRMGFQESNAAHQRTAEQSHALEEELYNARTLVESLRAESAALKAKVDEGVEDRHALEGKLRHLQAGVTEGQEAARQEGRQEVERLEARIRDLLKDRDRKQAELDLQNARRKETREMARDLESQLAAVERIAQEREVELSKQRDDMVALKKNTGEATDQKKTWATKYEALERNFKQVRAQSIRIESELEEAREHATRIEAEKAVLEERVEVEGAERVTVVASVSQERDFLLRQAI------AVDRLEQEVVELRRSQEAQATAAAARAQTTGVLEEYRTRAQQALKRANEITSQTASENKRLKAEMRKLSDEVAQQRPLWEQSKQLEEVHRAEVAELKEKIANQATELGNMAAAAAALEAQVLEKEEERRDAHTSVMRLEAQGKSLKQELQRQQKALAAAQENEVTLQTRLADQEAALQAAENRQRRKHSPEKVDVNADMGKNLSSPTPAVSSLSMGWDEEKHGSRNGTPRRGMGTEATGAAWPERRSLGESVSSMPSEADSADVAQGSVGEQLFYVHQLRERMSKEQIEMRSLISELEASRAAADAQAAKQAQLEKQLEAALLDKKRLQDLDSGRNAAINLEYLKNCVVGALRTSEPSEHARLLPVITTILKLSEDEAAVIAKNISTRAQHQGSFGGSLPPGGDARXXXXXXXXXXXXSSNPQQK 1035 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig69.15023.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig69.15023.1 >prot_E_fasciculatus_S2_contig69.15023.1 ID=prot_E_fasciculatus_S2_contig69.15023.1|Name=mRNA_E_fasciculatus_S2_contig69.15023.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=1040bp MFSGFDNFAEGFKRFSLDALQDQDDENATEKDEQKRLPAVPEQQHPTEHTback to top mRNA from alignment at E_fasciculatus_S2_contig69:1276..9078- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig69.15023.1 ID=mRNA_E_fasciculatus_S2_contig69.15023.1|Name=mRNA_E_fasciculatus_S2_contig69.15023.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7803bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig69:1276..9078- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig69:1276..9078- >mRNA_E_fasciculatus_S2_contig69.15023.1 ID=mRNA_E_fasciculatus_S2_contig69.15023.1|Name=mRNA_E_fasciculatus_S2_contig69.15023.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=3120bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig69:1276..9078- (Ectocarpus fasciculatus EfasUO2)back to top |