prot_E-fasciculatus_F_contig16351.4304.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig16351.4304.1
Unique Nameprot_E-fasciculatus_F_contig16351.4304.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length118
Homology
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BLAST of mRNA_E-fasciculatus_F_contig16351.4304.1 vs. uniprot
Match: D8LQY8_ECTSI (SCP-domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY8_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 1.260e-74
Identity = 108/118 (91.53%), Postives = 112/118 (94.92%), Query Frame = 0 
Query:    1 MCYESCVHEGSSYFATEDGSRCWCSLESHLDYSSDGVGVCNTWCGGDGSTTCGGSDGWSRDFYKIETADATLGVRAAGDGGSSSGDPLDRLLELHNAARCMHATGPLEFAEPVAATAK 118
            MCYESCVHEGSSYFAT+DGSRCWCSLESH DYSS GVGVC+TWCGGDGSTTCGGSDG SRDFYKIET +ATLGV AAGDG S+SGDPLDRLLELHNAARCMHATGPLEFAEPVAATAK
Sbjct:   14 MCYESCVHEGSSYFATQDGSRCWCSLESHFDYSSGGVGVCDTWCGGDGSTTCGGSDGLSRDFYKIETGEATLGVSAAGDGVSNSGDPLDRLLELHNAARCMHATGPLEFAEPVAATAK 131
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BLAST of mRNA_E-fasciculatus_F_contig16351.4304.1 vs. uniprot
Match: A0A6H5KE93_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE93_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 2.690e-45
Identity = 75/87 (86.21%), Postives = 79/87 (90.80%), Query Frame = 0 
Query:   32 YSSDGVGVCNTWCGGDGSTTCGGSDGWSRDFYKIETADATLGVRAAGDGGSSSGDPLDRLLELHNAARCMHATGPLEFAEPVAATAK 118
            Y   GVGVC+TWCGGDGSTTCGGSDG SRD+YKIET +ATLGV AAGDG S+S DPLDRLLELHNAARCMHATGPLEFAEPVAATAK
Sbjct:   28 YVWGGVGVCDTWCGGDGSTTCGGSDGLSRDYYKIETGEATLGVSAAGDGASNSADPLDRLLELHNAARCMHATGPLEFAEPVAATAK 114
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16351.4304.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQY8_ECTSI1.260e-7491.53SCP-domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KE93_9PHAE2.690e-4586.21SCP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 2..54
e-value: 5.3E-9
score: 36.2
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 1..64
score: 8.128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig16351contigE-fasciculatus_F_contig16351:105..2414 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig16351.4304.1mRNA_E-fasciculatus_F_contig16351.4304.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig16351 105..2414 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig16351.4304.1 ID=prot_E-fasciculatus_F_contig16351.4304.1|Name=mRNA_E-fasciculatus_F_contig16351.4304.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=118bp
MCYESCVHEGSSYFATEDGSRCWCSLESHLDYSSDGVGVCNTWCGGDGST
TCGGSDGWSRDFYKIETADATLGVRAAGDGGSSSGDPLDRLLELHNAARC
MHATGPLEFAEPVAATAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd