prot_E-fasciculatus_F_contig16305.4283.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig16305.4283.1
Unique Nameprot_E-fasciculatus_F_contig16305.4283.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length195
Homology
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BLAST of mRNA_E-fasciculatus_F_contig16305.4283.1 vs. uniprot
Match: A0A6H5L7I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7I9_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 7.940e-47
Identity = 110/194 (56.70%), Postives = 115/194 (59.28%), Query Frame = 0 
Query:    1 MRLNWISTGLRRKPGSMLAKDIDEVTCEGTSVTIIYSETTATGAPAPVRRRSLSPFRRSSTLSPVGHEGVGGGSQASKLGLDRRRKVYSTSKERDAQILKELLLFVRRKAISDFAAAVSRLXXXXXXXXXXXXXXXXXXXXXFVAENNGGNDNLTDSAIFGSERGRGGRSSTGPNTTRSTGVFTKSKGRRWSVK 194
            MRLNWISTGLRRK GSMLAKDI EVTCEGTS                                            ASKLGLDRRRKVYSTS+ERDAQILKELLLFVRR+AIS+FAAAVSRL                      VAEN GGN NL D+AIFG+ERGRGGR   G N T  TGVFTKSKGRR SVK
Sbjct:  212 MRLNWISTGLRRKTGSMLAKDIGEVTCEGTS--------------------------------------------ASKLGLDRRRKVYSTSQERDAQILKELLLFVRRQAISNFAAAVSRLAAAANSPAASTTGVDSAIC--LVAEN-GGNSNLIDTAIFGNERGRGGREPAGSNVTPITGVFTKSKGRRRSVK 358
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16305.4283.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L7I9_9PHAE7.940e-4756.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig16305contigE-fasciculatus_F_contig16305:1824..2627 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig16305.4283.1mRNA_E-fasciculatus_F_contig16305.4283.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig16305 1824..2657 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig16305.4283.1 ID=prot_E-fasciculatus_F_contig16305.4283.1|Name=mRNA_E-fasciculatus_F_contig16305.4283.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=195bp
MRLNWISTGLRRKPGSMLAKDIDEVTCEGTSVTIIYSETTATGAPAPVRR
RSLSPFRRSSTLSPVGHEGVGGGSQASKLGLDRRRKVYSTSKERDAQILK
ELLLFVRRKAISDFAAAVSRLAAAANNSPAASVTSSVDSTTSFVAENNGG
NDNLTDSAIFGSERGRGGRSSTGPNTTRSTGVFTKSKGRRWSVK*
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