prot_E-fasciculatus_F_contig16233.4244.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig16233.4244.1
Unique Nameprot_E-fasciculatus_F_contig16233.4244.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length96
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig16233.4244.1 vs. uniprot
Match: D7FVM3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM3_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 1.400e-40
Identity = 91/98 (92.86%), Postives = 91/98 (92.86%), Query Frame = 0 
Query:    1 MRNVTMSFGSGGXXXXXXXXXX---AVDGEENLAREPGKPVKYRYRQEAARSRKRTRGRFVSEKAPAFVSITELMALRRAERERQQKAETAPVPVGAG 95
            MRNVTMSFG   XXXXXXXXXX   AVDGEENLAREPGKPVKYRYRQEAARSRKRTRGRFVSEKAPAFVSITELMALRRAERERQQKAET PVPVGAG
Sbjct:  244 MRNVTMSFGGXXXXXXXXXXXXXXGAVDGEENLAREPGKPVKYRYRQEAARSRKRTRGRFVSEKAPAFVSITELMALRRAERERQQKAETTPVPVGAG 341
[Close]
BLAST of mRNA_E-fasciculatus_F_contig16233.4244.1 vs. uniprot
Match: A0A6H5JCF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCF1_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 6.500e-40
Identity = 82/95 (86.32%), Postives = 82/95 (86.32%), Query Frame = 0 
Query:    1 MRNVTMSFGSGGXXXXXXXXXXAVDGEENLAREPGKPVKYRYRQEAARSRKRTRGRFVSEKAPAFVSITELMALRRAERERQQKAETAPVPVGAG 95
            MRNVTMSFG  G          AVDGEENLAREPGKPVKYRYRQEAARSRKRTRGRFVSEKAPAFVSITELMALRRAERERQQKAET PVPVGAG
Sbjct:  649 MRNVTMSFGGDGGGGRDGAGG-AVDGEENLAREPGKPVKYRYRQEAARSRKRTRGRFVSEKAPAFVSITELMALRRAERERQQKAETTPVPVGAG 742
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16233.4244.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVM3_ECTSI1.400e-4092.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCF1_9PHAE6.500e-4086.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig16233contigE-fasciculatus_F_contig16233:460..747 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig16233.4244.1mRNA_E-fasciculatus_F_contig16233.4244.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig16233 2..1938 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig16233.4244.1 ID=prot_E-fasciculatus_F_contig16233.4244.1|Name=mRNA_E-fasciculatus_F_contig16233.4244.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=96bp
MRNVTMSFGSGGGSGGGGGSGGAVDGEENLAREPGKPVKYRYRQEAARSR
KRTRGRFVSEKAPAFVSITELMALRRAERERQQKAETAPVPVGAG*
back to top