prot_E-fasciculatus_F_contig16195.4220.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16195.4220.1 vs. uniprot
Match: A0A6H5JXB1_9PHAE (Ku domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXB1_9PHAE) HSP 1 Score: 278 bits (712), Expect = 1.970e-89 Identity = 137/142 (96.48%), Postives = 141/142 (99.30%), Query Frame = 0
Query: 1 MPEVEVDFEHQVKGFRYGQDYIPVNSVDEGSLKLPDEPPSLKVLGFTPSSSVERHFYMDDTFVLLPEPGSGQAAGAITSLSSAMRNLGQVAVARFVKRKSGEPWLGILIPDSTGVVPTERLLFQKIPFIEDVRAFNFPSFAK 142
MPEVEVDFEHQVKGFRYGQDYIPVNSVDEGSLKLPDEPPSLKVLGFTPSSSVERHFYMDDTFV+LPEPGSGQAAGAI+SLSSAMRNL QVAVARFV+RKSGEPWLGILIPD+TGVVPTERLLFQKIPFIEDVRAFNFPSFAK
Sbjct: 263 MPEVEVDFEHQVKGFRYGQDYIPVNSVDEGSLKLPDEPPSLKVLGFTPSSSVERHFYMDDTFVVLPEPGSGQAAGAISSLSSAMRNLDQVAVARFVRRKSGEPWLGILIPDTTGVVPTERLLFQKIPFIEDVRAFNFPSFAK 404
BLAST of mRNA_E-fasciculatus_F_contig16195.4220.1 vs. uniprot
Match: UPI001929E2C3 (LOW QUALITY PROTEIN: ATP-dependent DNA helicase 2 subunit KU80 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929E2C3) HSP 1 Score: 109 bits (273), Expect = 4.040e-25 Identity = 60/145 (41.38%), Postives = 97/145 (66.90%), Query Frame = 0
Query: 2 PEVEVDFEHQVKGFRYGQDYIPVNSVDEGSLKL-PDEPPSLKVLGFTPSSSVERHFYMDDTFVLLPEPGSGQAAGAITSLSSAMRNLGQVAVARFVKRKS-GEPWLGILIPDSTGV--VPTERLLFQKIPFIEDVRAFNFPSFAK 142
P+ V E ++KG+RYG IP++S + S+KL PD+ +K+LGFT SS+++RH+YM D + +PEPG+ +A A+++++ AM+ L +VA+ R V R+ G +GIL P+ + + +P + F +PF EDVR F FPSF++
Sbjct: 277 PDKVVPPEQRIKGYRYGPQVIPISSAEWDSVKLKPDK--GVKLLGFTDSSNIKRHYYMKDVYTFIPEPGNRKAIVAVSAIARAMKELNKVAILRCVWRQGQGSVVIGILSPNVSCMDNIP-DSFYFNILPFAEDVREFQFPSFSR 418
BLAST of mRNA_E-fasciculatus_F_contig16195.4220.1 vs. uniprot
Match: A0A836DKI7_9ROSI (ATP-dependent DNA helicase 2 subunit KU80 n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836DKI7_9ROSI) HSP 1 Score: 106 bits (265), Expect = 4.720e-24 Identity = 56/142 (39.44%), Postives = 91/142 (64.08%), Query Frame = 0
Query: 2 PEVEVDFEHQVKGFRYGQDYIPVNSVDEGSLKLPDEPPSLKVLGFTPSSSVERHFYMDDTFVLLPEPGSGQAAGAITSLSSAMRNLGQVAVARFVKRKS-GEPWLGILIPDSTGVVPT-ERLLFQKIPFIEDVRAFNFPSFA 141
P V E ++KG+RYG +P++S + ++K E S+K+LGFT +S++ RH+YM D + +PEPG+ +AA A+++L+ AM+ + +VA+ R V R+ G +G+L P+ + T + F +PF EDVR F FPSF+
Sbjct: 255 PNKVVPPEQRIKGYRYGPQVVPISSAEWDAVKFKPEK-SVKLLGFTDASNIMRHYYMKDVNIFIPEPGNARAALAVSALARAMKEMNKVAILRCVWRQGQGSVVVGVLTPNISEKDSTPDSFYFNTLPFAEDVREFQFPSFS 395
BLAST of mRNA_E-fasciculatus_F_contig16195.4220.1 vs. uniprot
Match: A0A4U5QUG0_POPAL (ATP-dependent DNA helicase 2 subunit KU80 n=6 Tax=Saliceae TaxID=238069 RepID=A0A4U5QUG0_POPAL) HSP 1 Score: 106 bits (265), Expect = 4.840e-24 Identity = 57/142 (40.14%), Postives = 91/142 (64.08%), Query Frame = 0
Query: 2 PEVEVDFEHQVKGFRYGQDYIPVNSVDEGSLKLPDEPPSLKVLGFTPSSSVERHFYMDDTFVLLPEPGSGQAAGAITSLSSAMRNLGQVAVARFVKRKS-GEPWLGILIPDSTGVVPT-ERLLFQKIPFIEDVRAFNFPSFA 141
P V E ++KG+RYG +P++S + ++K E S+K+LGFT +S++ RH+YM D V +PEPG+ +AA A+++L+ AM+ + +VA+ R V R+ G +G+L P+ + T + F +PF EDVR F FPSF+
Sbjct: 277 PNKVVPPEQRIKGYRYGPQVVPISSAEWDAVKFKPEK-SVKLLGFTDASNIMRHYYMKDVNVFIPEPGNARAALAVSALARAMKEMNKVAILRCVWRQGQGSVVVGVLTPNISEKDSTPDSFYFNVLPFAEDVREFQFPSFS 417
BLAST of mRNA_E-fasciculatus_F_contig16195.4220.1 vs. uniprot
Match: A0A5N5KBN1_9ROSI (Ku domain-containing protein n=1 Tax=Salix brachista TaxID=2182728 RepID=A0A5N5KBN1_9ROSI) HSP 1 Score: 105 bits (263), Expect = 9.290e-24 Identity = 56/142 (39.44%), Postives = 91/142 (64.08%), Query Frame = 0
Query: 2 PEVEVDFEHQVKGFRYGQDYIPVNSVDEGSLKLPDEPPSLKVLGFTPSSSVERHFYMDDTFVLLPEPGSGQAAGAITSLSSAMRNLGQVAVARFVKRKS-GEPWLGILIPDSTGVVPT-ERLLFQKIPFIEDVRAFNFPSFA 141
P V E ++KG+RYG +P++S + ++K E S+K+LGFT +S++ RH+YM D + +PEPG+ +AA A+++L+ AM+ + +VA+ R V R+ G +G+L P+ + T + F +PF EDVR F FPSF+
Sbjct: 374 PNKVVPPEQRIKGYRYGPQVVPISSAEWDAVKFKPEK-SVKLLGFTDASNIMRHYYMKDVNIFIPEPGNARAALAVSALARAMKEMNKVAILRCVWRQGQGSVAVGVLTPNISEKDSTPDSFYFNILPFAEDVREFQFPSFS 514
BLAST of mRNA_E-fasciculatus_F_contig16195.4220.1 vs. uniprot
Match: UPI0009E21682 (ATP-dependent DNA helicase 2 subunit KU80 isoform X1 n=2 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E21682) HSP 1 Score: 105 bits (261), Expect = 1.650e-23 Identity = 55/138 (39.86%), Postives = 91/138 (65.94%), Query Frame = 0
Query: 9 EHQVKGFRYGQDYIPVNSVDEGSLKLPDEPPSLKVLGFTPSSSVERHFYMDDTFVLLPEPGSGQAAGAITSLSSAMRNLGQVAVARFVKRKS-GEPWLGILIPD--STGVVPTERLLFQKIPFIEDVRAFNFPSFAKV 143
E ++KG+RYG +P++S + ++K E S+K+LGFT +S++ RH+YM D +V +PEPG+ +A A++SL+ AM+ + +VA+ R V R+ G +G+L P+ S+ +P + +PF EDVR F FPSF+ +
Sbjct: 284 EQRIKGYRYGPQIVPISSAEWEAVKFTPEK-SVKLLGFTDASNIMRHYYMKDVYVFIPEPGNVKAILAVSSLARAMKEMNKVAIMRCVWRQGQGNVIIGVLTPNISSSDNIP-DSFYLNVLPFAEDVREFQFPSFSNL 419
BLAST of mRNA_E-fasciculatus_F_contig16195.4220.1 vs. uniprot
Match: A0A6A6K212_HEVBR (ATP-dependent DNA helicase 2 subunit KU80 n=6 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6K212_HEVBR) HSP 1 Score: 105 bits (261), Expect = 1.680e-23 Identity = 60/155 (38.71%), Postives = 95/155 (61.29%), Query Frame = 0
Query: 3 EVEVDFEHQ--------------VKGFRYGQDYIPVNSVDEGSLKLPDEPPSLKVLGFTPSSSVERHFYMDDTFVLLPEPGSGQAAGAITSLSSAMRNLGQVAVARFVKRKS-GEPWLGILIPDSTGVVPT-ERLLFQKIPFIEDVRAFNFPSFA 141
EV+VD+E++ +KG+RYG +P++SV+ + K E S+K+LGFT +S++ RH+YM D + + EPG+ +AA A+++L+ AM+ L +VA+ R V R+ G LG+L P+ + T + F +PF EDVR F FPSF+
Sbjct: 263 EVKVDYEYKSVEDPSKVIPPNQRIKGYRYGPQVVPISSVEWDAFKFKPEK-SVKLLGFTNASNILRHYYMKDVNIFIAEPGNARAAIAVSALARAMKELNKVAIVRCVWRQGQGSVVLGVLTPNLSEKDKTPDSFCFNVLPFAEDVREFQFPSFS 416
BLAST of mRNA_E-fasciculatus_F_contig16195.4220.1 vs. uniprot
Match: A0A3S3NK88_9MAGN (ATP-dependent DNA helicase 2 subunit KU80 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3NK88_9MAGN) HSP 1 Score: 104 bits (259), Expect = 3.130e-23 Identity = 56/138 (40.58%), Postives = 90/138 (65.22%), Query Frame = 0
Query: 9 EHQVKGFRYGQDYIPVNSVDEGSLKLPDEPPSLKVLGFTPSSSVERHFYMDDTFVLLPEPGSGQAAGAITSLSSAMRNLGQVAVARFVKRKS-GEPWLGILIPDSTGV--VPTERLLFQKIPFIEDVRAFNFPSFAKV 143
E ++KG+RYG +P++S + ++K E S+K+LGFT +S++ RH+YM D V +PEPG+ +A A++SL+ AM+ + +VA+ R V R+ G +G+L P+ + + VP + F +PF EDVR F FPSF +
Sbjct: 284 EQRIKGYRYGPQVVPISSAEWEAVKFKPEK-SVKLLGFTDASNIMRHYYMKDVNVFIPEPGNTKAILAVSSLARAMKEMNKVAILRCVWRQGQGNVVIGVLTPNLSTLDNVP-DSFYFNVLPFAEDVREFQFPSFGNL 419
BLAST of mRNA_E-fasciculatus_F_contig16195.4220.1 vs. uniprot
Match: A0A6I9S7F9_ELAGV (ATP-dependent DNA helicase 2 subunit KU80 n=6 Tax=Arecaceae TaxID=4710 RepID=A0A6I9S7F9_ELAGV) HSP 1 Score: 103 bits (256), Expect = 7.940e-23 Identity = 52/142 (36.62%), Postives = 93/142 (65.49%), Query Frame = 0
Query: 2 PEVEVDFEHQVKGFRYGQDYIPVNSVDEGSLKLPDEPPSLKVLGFTPSSSVERHFYMDDTFVLLPEPGSGQAAGAITSLSSAMRNLGQVAVARFVKRKS-GEPWLGILIPDSTGV--VPTERLLFQKIPFIEDVRAFNFPSF 140
P+ V E +++G+RYG +P++S + ++K E +K+LGFT +S++ RH+YM D ++ +PEPG+ +A A+++++ AM+++ + A+ R V R+ G +G+L P+ + V +P + F +PF+EDVR F FPSF
Sbjct: 276 PDKVVPPEQRIRGYRYGPQVVPISSAEWEAVKFKPEK-GVKLLGFTDASNILRHYYMKDVYIFIPEPGNQKAIVAVSAIARAMKDMNKSAILRCVWRQGQGNVVIGVLRPNISSVDNIP-DSFYFNVLPFVEDVREFQFPSF 415
BLAST of mRNA_E-fasciculatus_F_contig16195.4220.1 vs. uniprot
Match: A0A803NVL4_CANSA (ATP-dependent DNA helicase 2 subunit KU80 n=4 Tax=Cannabis sativa TaxID=3483 RepID=A0A803NVL4_CANSA) HSP 1 Score: 103 bits (256), Expect = 7.940e-23 Identity = 56/145 (38.62%), Postives = 90/145 (62.07%), Query Frame = 0
Query: 2 PEVEVDFEHQVKGFRYGQDYIPVNSVDEGSLKLPDEPPSLKVLGFTPSSSVERHFYMDDTFVLLPEPGSGQAAGAITSLSSAMRNLGQVAVARFVKRKS-GEPWLGILIPDSTGV--VPTERLLFQKIPFIEDVRAFNFPSFAKV 143
P V E ++KG+RYG +P++S + ++K E S+KVLGFT + ++ RH+YM D +V +PEPG +A A+++L+ AM+ +VA+ R V R+ G +G+L P+ + +P + F +PF EDVR F FPSF+ +
Sbjct: 277 PSTVVPPEQRIKGYRYGPQVVPISSAEWYAVKFKPEK-SVKVLGFTDAGNIMRHYYMKDAYVFIPEPGKTKAILAVSALARAMKEANKVAILRCVWRQGQGNVVVGVLTPNISDRDNIP-DSFYFNVLPFAEDVREFQFPSFSNL 419 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16195.4220.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-fasciculatus_F_contig16195.4220.1 ID=prot_E-fasciculatus_F_contig16195.4220.1|Name=mRNA_E-fasciculatus_F_contig16195.4220.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=143bpback to top |