prot_E-fasciculatus_F_contig1596.4082.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1596.4082.1
Unique Nameprot_E-fasciculatus_F_contig1596.4082.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length183
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1596.4082.1 vs. uniprot
Match: D7G7T2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7T2_ECTSI)

HSP 1 Score: 308 bits (788), Expect = 4.250e-105
Identity = 156/182 (85.71%), Postives = 165/182 (90.66%), Query Frame = 0 
Query:    1 MLMPGPRKTAMAGPWQASLLLLLLSSLWQLGFCSALRVGGAPHRSNFKMFKARYPLEGGPPQVKLHVAIIIVEDARTTGEKGGLSNGEDGDAGRRLVLFDFLPKEPTAFDTTLRLLTGNDVPGNLRERELRFLPPGSVYVGESDATIGEMRGFVAKYPDRLSLVSNNCFSFVDAFVARHRLE 182
            M++ G R  A+AGPW A+LLLLLLSSL QLGFCSAL     PHRSNFKMFKARYPLEGGPPQVKLH+A IIVED+R+TGEKGG  N ED D GRRLVLFDFLPKEPTAF+TTLRLLTGNDVPGNLRERELRFLPPGSVYVGESDATIG+MRGFVAKYPDRLSLVSNNCFSFVDAFVARHRLE
Sbjct:    1 MVILGQRAAALAGPWHAALLLLLLSSLRQLGFCSALLGVAPPHRSNFKMFKARYPLEGGPPQVKLHIA-IIVEDSRSTGEKGGRPNSEDRDTGRRLVLFDFLPKEPTAFETTLRLLTGNDVPGNLRERELRFLPPGSVYVGESDATIGDMRGFVAKYPDRLSLVSNNCFSFVDAFVARHRLE 181
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BLAST of mRNA_E-fasciculatus_F_contig1596.4082.1 vs. uniprot
Match: A0A7R9ZN28_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZN28_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 8.930e-5
Identity = 28/74 (37.84%), Postives = 44/74 (59.46%), Query Frame = 0 
Query:   55 PLEGGPPQVKLHVAIIIVEDARTTGEKGGLSNGEDGDAGRR--LVLFDFLPKEPTAFDTTLRLLTGNDVPGNLR 126
            PL GGP  + LHV +++  DA    ++ G ++G+D +  R   LV+ DF+P   T+  T  +L+T  DVPG +R
Sbjct:   79 PLIGGPSWLPLHVQVVVAVDANVIVDESG-NHGKDSNTRREVELVVVDFIPLNATSSATLQKLITLQDVPGQIR 151
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1596.4082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7T2_ECTSI4.250e-10585.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9ZN28_9STRA8.930e-537.84Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..182
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..35
score: 0.887

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1596contigE-fasciculatus_F_contig1596:4273..4821 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1596.4082.1mRNA_E-fasciculatus_F_contig1596.4082.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1596 4007..5777 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1596.4082.1 ID=prot_E-fasciculatus_F_contig1596.4082.1|Name=mRNA_E-fasciculatus_F_contig1596.4082.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=183bp
MLMPGPRKTAMAGPWQASLLLLLLSSLWQLGFCSALRVGGAPHRSNFKMF
KARYPLEGGPPQVKLHVAIIIVEDARTTGEKGGLSNGEDGDAGRRLVLFD
FLPKEPTAFDTTLRLLTGNDVPGNLRERELRFLPPGSVYVGESDATIGEM
RGFVAKYPDRLSLVSNNCFSFVDAFVARHRLE*
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