prot_E-fasciculatus_F_contig15567.3875.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15567.3875.1
Unique Nameprot_E-fasciculatus_F_contig15567.3875.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length200
Homology
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: D7G8A0_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A0_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 4.350e-119
Identity = 195/200 (97.50%), Postives = 196/200 (98.00%), Query Frame = 0
Query:    1 LRPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 200
            LRPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDD   +KRS LSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV
Sbjct: 1509 LRPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDD---DKRSSLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 1705          
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: A0A6H5JFV2_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFV2_9PHAE)

HSP 1 Score: 380 bits (976), Expect = 1.140e-118
Identity = 194/200 (97.00%), Postives = 196/200 (98.00%), Query Frame = 0
Query:    1 LRPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 200
            LRPRGVLALTATASKAVVEDICTTLRIPRK GVKVGSWDRPNLDVRVLRSASDD   +KRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKG+ELVQV
Sbjct: 1655 LRPRGVLALTATASKAVVEDICTTLRIPRKHGVKVGSWDRPNLDVRVLRSASDD---DKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGMELVQV 1851          
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: A0A835Z8Q0_9STRA (DNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q0_9STRA)

HSP 1 Score: 213 bits (542), Expect = 5.640e-61
Identity = 113/200 (56.50%), Postives = 137/200 (68.50%), Query Frame = 0
Query:    1 LRPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 200
            L  R VLALTATAS+AVV ++C +L IP   GV+VGSW RPNL V V R A D   + KR  L  L+ +     G+ +VYVWRQV+AE V   LQ +GH+A AYH GM+AG R + Q AFMR R RV+VATVAFGLGVDM  +R V+H+D P S+E YVQE+GRAGRDG  A C LLL D DF   HSL+HS  ++   V
Sbjct:  136 LNARCVLALTATASRAVVSELCASLSIPAC-GVRVGSWQRPNLRVAVQRVADD---AAKRRVLRALMAQPAFGDGACIVYVWRQVSAEVVAEFLQSEGHSAAAYHAGMDAGERAKVQAAFMRRRVRVMVATVAFGLGVDMACVRAVIHYDAPSSLEGYVQEVGRAGRDGAPAHCRLLLSDADFAARHSLAHSNHMQRAHV 331          
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: A0A3L6VVH4_9STRA (DNA helicase (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VVH4_9STRA)

HSP 1 Score: 184 bits (468), Expect = 2.180e-51
Identity = 103/200 (51.50%), Postives = 129/200 (64.50%), Query Frame = 0
Query:    2 RPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGH-NAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 200
            R   VLALTATAS AV  DI   L IP   G+   S  RPNLD+ V R   DD   ++ + L  LL  APL+KGSV+VYV  Q  A  V ALL  + +  A AYH G+ +  +++ Q  F  G+ RVVVAT+AFG+G+D  ++RGVVHF MP S+E+YVQ IGRAGRDG+ A C +LL   DFV  HSL+HS GL + QV
Sbjct:  123 RATNVLALTATASVAVTRDIVRILEIPTDQGIHRCSAYRPNLDLHVQRIQHDD---DRYAALRTLLTTAPLNKGSVIVYVHTQYAAAQVAALLTTEANIKASAYHAGLSSDVKEKVQKGFASGKVRVVVATIAFGMGIDKANVRGVVHFHMPTSMEHYVQHIGRAGRDGKKASCVVLLLQSDFVRFHSLAHSDGLSMPQV 319          
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: W7TAC7_9STRA (DNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAC7_9STRA)

HSP 1 Score: 184 bits (466), Expect = 4.070e-50
Identity = 102/207 (49.28%), Postives = 131/207 (63.29%), Query Frame = 0
Query:    1 LRPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMR-------GRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 200
            LRPR +LA+TATA   V++DIC+ L I    GV    W R NL +R+     D     KR  +  LL  AP D+GSV+VYV +Q  AE +   L  +G +AVAYH GM+   R  AQ A+MR       GR+RV VAT+AFGLGVD  D+R V+H++MPKS+EN VQE GRAGRDG+ A C  LL   DF   HSL+HS G+ ++Q+
Sbjct: 1176 LRPRALLAMTATADPGVMKDICSRLSISSDAGVLAQPWRRHNLRLRI--QLLDGDAELKRRHILNLLSNAPYDQGSVIVYVRQQKDAEILKDFLVSEGQSAVAYHAGMDMRHRDMAQGAWMRRRITGSGGRARVCVATIAFGLGVDKGDVRAVLHYEMPKSVENLVQETGRAGRDGKEAWCQTLLSQHDFRRQHSLAHSDGVSILQL 1380          
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: W4G2T7_9STRA (DNA helicase n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G2T7_9STRA)

HSP 1 Score: 182 bits (463), Expect = 9.700e-50
Identity = 102/199 (51.26%), Postives = 128/199 (64.32%), Query Frame = 0
Query:    2 RPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGH-NAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQ 199
            R   VLALTATAS AV  DI   L IP   G+   S  RPNLD+ V R   DD   ++ + L  LL  APL+KGSV+VYV  Q  A  V ALL  + +  A AYH G+ +  +++ Q  F  G+ RVVVAT+AFG+G+D  ++RGVVHF MP S+E+YVQ IGRAGRDG+ A C +LL   DFV  HSL+HS GL + Q
Sbjct:  590 RATNVLALTATASVAVTRDIVRILEIPTDRGIHRCSAYRPNLDLHVQRIQHDD---DRYAALRTLLTTAPLNKGSVIVYVHTQYAAAQVAALLTTEANIKASAYHAGLSSDVKEKVQKGFASGKVRVVVATIAFGMGIDKANVRGVVHFHMPTSMEHYVQHIGRAGRDGKKASCAVLLLQSDFVRFHSLAHSDGLSMPQ 785          
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: A0A485K974_9STRA (DNA helicase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K974_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.130e-48
Identity = 102/200 (51.00%), Postives = 125/200 (62.50%), Query Frame = 0
Query:    2 RPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGH-NAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 200
            R   VLALTATAS AV  DI  TL IP  DG+   S  R NL + V R A +D   ++   L +LL   PL KGSV+VYV  Q  A  V  LL  D    A AYH G+ +  + + Q  F  G+ RVVVAT+AFG+G+D  ++RGVVH+ MP S+E+YVQ IGRAGRDG+ A C LLL   DFV  HSL+HS GL + QV
Sbjct:  553 RATKVLALTATASVAVTHDIVRTLHIPSPDGIHRCSARRSNLQLHVQRLAHED---DRYDALRKLLLSPPLHKGSVIVYVHTQYAATQVAGLLTSDASIKASAYHAGLTSDIKDKVQKGFTAGKIRVVVATIAFGMGIDKANVRGVVHYHMPSSMEHYVQHIGRAGRDGKVATCVLLLVHSDFVRFHSLAHSDGLSMPQV 749          
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: A0A6G0XI93_9STRA (DNA helicase n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XI93_9STRA)

HSP 1 Score: 177 bits (449), Expect = 6.980e-48
Identity = 98/200 (49.00%), Postives = 127/200 (63.50%), Query Frame = 0
Query:    2 RPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGH-NAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 200
            R   VLALTATAS  V  D+   L +P  +G+   S  RPNL + V +    D E ++   L +LL   PL KGSV+VYV  Q  A  V  LL  DG   A AYH G++A  +++ Q  F  G+ RVVVAT+AFG+G+D  ++RGVVH+ MP S+E+YVQ IGRAGRDG+ A C LLL   DF+  HSL+HS G+ +VQV
Sbjct:  526 RATKVLALTATASVPVTRDVSRLLEVP-SEGIHRCSASRPNLSLHVQQI---DHEEDRYMALRKLLSTPPLSKGSVIVYVHTQYAASQVAGLLASDGAIKASAYHAGLDADIKEKVQKGFASGKIRVVVATIAFGMGIDKANVRGVVHYHMPSSMEHYVQHIGRAGRDGKPATCVLLLVASDFIRFHSLAHSDGVSMVQV 721          
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: A0A3R7CWC5_9STRA (DNA helicase (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7CWC5_9STRA)

HSP 1 Score: 171 bits (432), Expect = 7.340e-46
Identity = 98/200 (49.00%), Postives = 126/200 (63.00%), Query Frame = 0
Query:    2 RPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGH-NAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 200
            R   VLALTATAS  V  DI   L +P  DG+      R NL +RVLR   DD   ++   L +LL  APL+KGSV+VYV  Q  A  V ALL  +   +A AYH  + A  + + QN F  G+ RVVVAT+AFG+G+D  ++RGVVH+ MP S+E+YVQ IGRAGRDG+ + C LLL   D +  HSL+H+ GL + QV
Sbjct:  468 RATKVLALTATASVPVTHDIVRILDVP-PDGIHRCRAYRANLQLRVLRVEHDD---DRYDALRKLLVTAPLNKGSVIVYVHSQYAATQVAALLSSEASVHARAYHAALPAHVKDKVQNGFAAGKIRVVVATIAFGMGIDKANVRGVVHYHMPSSMEHYVQHIGRAGRDGKKSTCVLLLIASDLIRFHSLAHADGLSMPQV 663          
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: A0A024TZM5_9STRA (DNA helicase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZM5_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.420e-45
Identity = 98/200 (49.00%), Postives = 126/200 (63.00%), Query Frame = 0
Query:    2 RPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGH-NAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 200
            R   VLALTATAS  V  DI   L +P  DG+      R NL +RVLR   DD   ++   L +LL  APL+KGSV+VYV  Q  A  V ALL  +   +A AYH  + A  + + QN F  G+ RVVVAT+AFG+G+D  ++RGVVH+ MP S+E+YVQ IGRAGRDG+ + C LLL   D +  HSL+H+ GL + QV
Sbjct:  553 RATKVLALTATASVPVTHDIVRILDVP-PDGIHRCRAYRANLQLRVLRVEHDD---DRYDALRKLLVTAPLNKGSVIVYVHSQYAATQVAALLSSEASVHARAYHAALPAHVKDKVQNGFAAGKIRVVVATIAFGMGIDKANVRGVVHYHMPSSMEHYVQHIGRAGRDGKKSTCVLLLIASDLIRFHSLAHADGLSMPQV 748          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8A0_ECTSI4.350e-11997.50DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JFV2_9PHAE1.140e-11897.00DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A835Z8Q0_9STRA5.640e-6156.50DNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A3L6VVH4_9STRA2.180e-5151.50DNA helicase (Fragment) n=1 Tax=Aphanomyces astaci... [more]
W7TAC7_9STRA4.070e-5049.28DNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
W4G2T7_9STRA9.700e-5051.26DNA helicase n=6 Tax=Aphanomyces astaci TaxID=1120... [more]
A0A485K974_9STRA1.130e-4851.00DNA helicase n=1 Tax=Aphanomyces stellatus TaxID=1... [more]
A0A6G0XI93_9STRA6.980e-4849.00DNA helicase n=2 Tax=Aphanomyces euteiches TaxID=1... [more]
A0A3R7CWC5_9STRA7.340e-4649.00DNA helicase (Fragment) n=1 Tax=Aphanomyces invada... [more]
A0A024TZM5_9STRA1.420e-4549.00DNA helicase n=1 Tax=Aphanomyces invadans TaxID=15... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 88..169
e-value: 6.0E-26
score: 102.2
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 59..168
e-value: 5.5E-19
score: 68.6
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 62..200
score: 17.525
NoneNo IPR availableGENE3D3.40.50.300coord: 40..198
e-value: 1.4E-41
score: 144.4
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 6..196
NoneNo IPR availablePANTHERPTHR13710:SF108ATP-DEPENDENT DNA HELICASE Q4coord: 6..196
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..200
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..31
score: 6.661
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 38..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15567contigE-fasciculatus_F_contig15567:2..1318 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15567.3875.1mRNA_E-fasciculatus_F_contig15567.3875.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15567 2..1318 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15567.3875.1 ID=prot_E-fasciculatus_F_contig15567.3875.1|Name=mRNA_E-fasciculatus_F_contig15567.3875.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=200bp
LRPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRS
ASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHN
AVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFD
MPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014001Helicase_ATP-bd
IPR001650Helicase_C