mRNA_E-fasciculatus_F_contig15567.3875.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: D7G8A0_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A0_ECTSI) HSP 1 Score: 381 bits (979), Expect = 4.350e-119 Identity = 195/200 (97.50%), Postives = 196/200 (98.00%), Query Frame = 1
Query: 1 LRPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 600
LRPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDD +KRS LSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV
Sbjct: 1509 LRPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDD---DKRSSLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 1705
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: A0A6H5JFV2_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFV2_9PHAE) HSP 1 Score: 380 bits (976), Expect = 1.140e-118 Identity = 194/200 (97.00%), Postives = 196/200 (98.00%), Query Frame = 1
Query: 1 LRPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 600
LRPRGVLALTATASKAVVEDICTTLRIPRK GVKVGSWDRPNLDVRVLRSASDD +KRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKG+ELVQV
Sbjct: 1655 LRPRGVLALTATASKAVVEDICTTLRIPRKHGVKVGSWDRPNLDVRVLRSASDD---DKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGMELVQV 1851
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: A0A835Z8Q0_9STRA (DNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q0_9STRA) HSP 1 Score: 213 bits (542), Expect = 5.640e-61 Identity = 113/200 (56.50%), Postives = 137/200 (68.50%), Query Frame = 1
Query: 1 LRPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 600
L R VLALTATAS+AVV ++C +L IP GV+VGSW RPNL V V R A D + KR L L+ + G+ +VYVWRQV+AE V LQ +GH+A AYH GM+AG R + Q AFMR R RV+VATVAFGLGVDM +R V+H+D P S+E YVQE+GRAGRDG A C LLL D DF HSL+HS ++ V
Sbjct: 136 LNARCVLALTATASRAVVSELCASLSIPAC-GVRVGSWQRPNLRVAVQRVADD---AAKRRVLRALMAQPAFGDGACIVYVWRQVSAEVVAEFLQSEGHSAAAYHAGMDAGERAKVQAAFMRRRVRVMVATVAFGLGVDMACVRAVIHYDAPSSLEGYVQEVGRAGRDGAPAHCRLLLSDADFAARHSLAHSNHMQRAHV 331
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: A0A3L6VVH4_9STRA (DNA helicase (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VVH4_9STRA) HSP 1 Score: 184 bits (468), Expect = 2.180e-51 Identity = 103/200 (51.50%), Postives = 129/200 (64.50%), Query Frame = 1
Query: 4 RPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGH-NAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 600
R VLALTATAS AV DI L IP G+ S RPNLD+ V R DD ++ + L LL APL+KGSV+VYV Q A V ALL + + A AYH G+ + +++ Q F G+ RVVVAT+AFG+G+D ++RGVVHF MP S+E+YVQ IGRAGRDG+ A C +LL DFV HSL+HS GL + QV
Sbjct: 123 RATNVLALTATASVAVTRDIVRILEIPTDQGIHRCSAYRPNLDLHVQRIQHDD---DRYAALRTLLTTAPLNKGSVIVYVHTQYAAAQVAALLTTEANIKASAYHAGLSSDVKEKVQKGFASGKVRVVVATIAFGMGIDKANVRGVVHFHMPTSMEHYVQHIGRAGRDGKKASCVVLLLQSDFVRFHSLAHSDGLSMPQV 319
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: W7TAC7_9STRA (DNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAC7_9STRA) HSP 1 Score: 184 bits (466), Expect = 4.070e-50 Identity = 102/207 (49.28%), Postives = 131/207 (63.29%), Query Frame = 1
Query: 1 LRPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMR-------GRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 600
LRPR +LA+TATA V++DIC+ L I GV W R NL +R+ D KR + LL AP D+GSV+VYV +Q AE + L +G +AVAYH GM+ R AQ A+MR GR+RV VAT+AFGLGVD D+R V+H++MPKS+EN VQE GRAGRDG+ A C LL DF HSL+HS G+ ++Q+
Sbjct: 1176 LRPRALLAMTATADPGVMKDICSRLSISSDAGVLAQPWRRHNLRLRI--QLLDGDAELKRRHILNLLSNAPYDQGSVIVYVRQQKDAEILKDFLVSEGQSAVAYHAGMDMRHRDMAQGAWMRRRITGSGGRARVCVATIAFGLGVDKGDVRAVLHYEMPKSVENLVQETGRAGRDGKEAWCQTLLSQHDFRRQHSLAHSDGVSILQL 1380
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: W4G2T7_9STRA (DNA helicase n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G2T7_9STRA) HSP 1 Score: 182 bits (463), Expect = 9.700e-50 Identity = 102/199 (51.26%), Postives = 128/199 (64.32%), Query Frame = 1
Query: 4 RPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGH-NAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQ 597
R VLALTATAS AV DI L IP G+ S RPNLD+ V R DD ++ + L LL APL+KGSV+VYV Q A V ALL + + A AYH G+ + +++ Q F G+ RVVVAT+AFG+G+D ++RGVVHF MP S+E+YVQ IGRAGRDG+ A C +LL DFV HSL+HS GL + Q
Sbjct: 590 RATNVLALTATASVAVTRDIVRILEIPTDRGIHRCSAYRPNLDLHVQRIQHDD---DRYAALRTLLTTAPLNKGSVIVYVHTQYAAAQVAALLTTEANIKASAYHAGLSSDVKEKVQKGFASGKVRVVVATIAFGMGIDKANVRGVVHFHMPTSMEHYVQHIGRAGRDGKKASCAVLLLQSDFVRFHSLAHSDGLSMPQ 785
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: A0A485K974_9STRA (DNA helicase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K974_9STRA) HSP 1 Score: 179 bits (455), Expect = 1.130e-48 Identity = 102/200 (51.00%), Postives = 125/200 (62.50%), Query Frame = 1
Query: 4 RPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGH-NAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 600
R VLALTATAS AV DI TL IP DG+ S R NL + V R A +D ++ L +LL PL KGSV+VYV Q A V LL D A AYH G+ + + + Q F G+ RVVVAT+AFG+G+D ++RGVVH+ MP S+E+YVQ IGRAGRDG+ A C LLL DFV HSL+HS GL + QV
Sbjct: 553 RATKVLALTATASVAVTHDIVRTLHIPSPDGIHRCSARRSNLQLHVQRLAHED---DRYDALRKLLLSPPLHKGSVIVYVHTQYAATQVAGLLTSDASIKASAYHAGLTSDIKDKVQKGFTAGKIRVVVATIAFGMGIDKANVRGVVHYHMPSSMEHYVQHIGRAGRDGKVATCVLLLVHSDFVRFHSLAHSDGLSMPQV 749
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: A0A6G0XI93_9STRA (DNA helicase n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XI93_9STRA) HSP 1 Score: 177 bits (449), Expect = 6.980e-48 Identity = 98/200 (49.00%), Postives = 127/200 (63.50%), Query Frame = 1
Query: 4 RPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGH-NAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 600
R VLALTATAS V D+ L +P +G+ S RPNL + V + D E ++ L +LL PL KGSV+VYV Q A V LL DG A AYH G++A +++ Q F G+ RVVVAT+AFG+G+D ++RGVVH+ MP S+E+YVQ IGRAGRDG+ A C LLL DF+ HSL+HS G+ +VQV
Sbjct: 526 RATKVLALTATASVPVTRDVSRLLEVP-SEGIHRCSASRPNLSLHVQQI---DHEEDRYMALRKLLSTPPLSKGSVIVYVHTQYAASQVAGLLASDGAIKASAYHAGLDADIKEKVQKGFASGKIRVVVATIAFGMGIDKANVRGVVHYHMPSSMEHYVQHIGRAGRDGKPATCVLLLVASDFIRFHSLAHSDGVSMVQV 721
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: A0A3R7CWC5_9STRA (DNA helicase (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7CWC5_9STRA) HSP 1 Score: 171 bits (432), Expect = 7.340e-46 Identity = 98/200 (49.00%), Postives = 126/200 (63.00%), Query Frame = 1
Query: 4 RPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGH-NAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 600
R VLALTATAS V DI L +P DG+ R NL +RVLR DD ++ L +LL APL+KGSV+VYV Q A V ALL + +A AYH + A + + QN F G+ RVVVAT+AFG+G+D ++RGVVH+ MP S+E+YVQ IGRAGRDG+ + C LLL D + HSL+H+ GL + QV
Sbjct: 468 RATKVLALTATASVPVTHDIVRILDVP-PDGIHRCRAYRANLQLRVLRVEHDD---DRYDALRKLLVTAPLNKGSVIVYVHSQYAATQVAALLSSEASVHARAYHAALPAHVKDKVQNGFAAGKIRVVVATIAFGMGIDKANVRGVVHYHMPSSMEHYVQHIGRAGRDGKKSTCVLLLIASDLIRFHSLAHADGLSMPQV 663
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Match: A0A024TZM5_9STRA (DNA helicase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZM5_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.420e-45 Identity = 98/200 (49.00%), Postives = 126/200 (63.00%), Query Frame = 1
Query: 4 RPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDGESNKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGH-NAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQV 600
R VLALTATAS V DI L +P DG+ R NL +RVLR DD ++ L +LL APL+KGSV+VYV Q A V ALL + +A AYH + A + + QN F G+ RVVVAT+AFG+G+D ++RGVVH+ MP S+E+YVQ IGRAGRDG+ + C LLL D + HSL+H+ GL + QV
Sbjct: 553 RATKVLALTATASVPVTHDIVRILDVP-PDGIHRCRAYRANLQLRVLRVEHDD---DRYDALRKLLVTAPLNKGSVIVYVHSQYAATQVAALLSSEASVHARAYHAALPAHVKDKVQNGFAAGKIRVVVATIAFGMGIDKANVRGVVHYHMPSSMEHYVQHIGRAGRDGKKSTCVLLLIASDLIRFHSLAHADGLSMPQV 748 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15567.3875.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15567.3875.1 >prot_E-fasciculatus_F_contig15567.3875.1 ID=prot_E-fasciculatus_F_contig15567.3875.1|Name=mRNA_E-fasciculatus_F_contig15567.3875.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=200bp LRPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSback to top mRNA from alignment at E-fasciculatus_F_contig15567:2..1318+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15567.3875.1 ID=mRNA_E-fasciculatus_F_contig15567.3875.1|Name=mRNA_E-fasciculatus_F_contig15567.3875.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1317bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15567:2..1318+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15567:2..1318+ >mRNA_E-fasciculatus_F_contig15567.3875.1 ID=mRNA_E-fasciculatus_F_contig15567.3875.1|Name=mRNA_E-fasciculatus_F_contig15567.3875.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1200bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15567:2..1318+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |