prot_E-fasciculatus_F_contig15396.3783.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15396.3783.1
Unique Nameprot_E-fasciculatus_F_contig15396.3783.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length257
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15396.3783.1 vs. uniprot
Match: D7FNF1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNF1_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 1.070e-66
Identity = 165/207 (79.71%), Postives = 168/207 (81.16%), Query Frame = 0 
Query:    4 RRRGGPSPSVLQQRVGLAAAGVVLLGVSWSAGAFVLTPPRVFTTAGKFNAALPLPASPRQGSRLS--MMSEKN-AEIVATAAPXXXXXXXXXXXXXXVRAAPXXXXXXXXXXXXXXXXXXXXAVQQHQASTAIENVDAAAAVAQE----AGEEVVRLTANTVARALPGTWLTDGLPKWMHTLRRRMITKEDWMHLHASSGAVSANGG 203
            RRRGGPSP+ LQQRVGLAAAGVVLLGVSWSA AFVLTPPRVF  AGKFNAALP  ASPRQGS     MMSEKN  EIVA A P  XXXXXXXXXXXX          XXXXXXXXXXXXXXXAVQQHQA+TAIENVDA  AVAQE    AGEEVVRLTA TVARALPGTWLT GLPKWMH LRRRMITKEDWMHLHASSGA+   GG
Sbjct:    5 RRRGGPSPAGLQQRVGLAAAGVVLLGVSWSARAFVLTPPRVFAAAGKFNAALP--ASPRQGSSFFKIMMSEKNNVEIVAAAGPAAXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXAVQQHQANTAIENVDAVGAVAQEEVRQAGEEVVRLTATTVARALPGTWLTAGLPKWMHILRRRMITKEDWMHLHASSGALYIAGG 203
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15396.3783.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNF1_ECTSI1.070e-6679.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..256
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15396contigE-fasciculatus_F_contig15396:1132..1902 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15396.3783.1mRNA_E-fasciculatus_F_contig15396.3783.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15396 1056..3044 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15396.3783.1 ID=prot_E-fasciculatus_F_contig15396.3783.1|Name=mRNA_E-fasciculatus_F_contig15396.3783.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=257bp
MAARRRGGPSPSVLQQRVGLAAAGVVLLGVSWSAGAFVLTPPRVFTTAGK
FNAALPLPASPRQGSRLSMMSEKNAEIVATAAPATATATATATATATVRA
APPAAATAGGASSAAASATATAAVQQHQASTAIENVDAAAAVAQEAGEEV
VRLTANTVARALPGTWLTDGLPKWMHTLRRRMITKEDWMHLHASSGAVSA
NGGVVVKFHSRLLLFSSSRGACHTKIPMTRPKKTPNKNFRFVTTVLDLAG
IWCQHQ*
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