prot_E-fasciculatus_F_contig1538.3776.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1538.3776.1
Unique Nameprot_E-fasciculatus_F_contig1538.3776.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length92
Homology
BLAST of mRNA_E-fasciculatus_F_contig1538.3776.1 vs. uniprot
Match: D7FIM1_ECTSI (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIM1_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 2.140e-47
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 0
Query:    5 ERASPPPVLLSPARSRLVAAGVRGMFNLGNTCFMSSVLQAVLHISVMQSFFFEKGHEPARCEKLRKETTKLRSQILQYDSNASFDNHP 92
            ERASPPPVLLSPARSRLVAAGVRGMFNLGNTCFMSSVLQAVLHISVMQSFF EKGHEP+RCEKLRKETTKLRSQILQYDSNASFDNHP
Sbjct:  137 ERASPPPVLLSPARSRLVAAGVRGMFNLGNTCFMSSVLQAVLHISVMQSFFSEKGHEPSRCEKLRKETTKLRSQILQYDSNASFDNHP 224          
BLAST of mRNA_E-fasciculatus_F_contig1538.3776.1 vs. uniprot
Match: A0A4D9D8F2_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8F2_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.280e-8
Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 0
Query:   11 PVLLSPARSRLVAAGVRGMFNLGNTCFMSSVLQAVLHISVMQSFFFEKGHEPARCEK 67
            P+L  P   R    G+RG +NLG+TCFMS +LQA+LH  V++ FF  + H  A C K
Sbjct:   57 PLLAQPCLVRHATHGLRGFYNLGSTCFMSCILQALLHNPVLKDFFLRRSHSLATCPK 113          
BLAST of mRNA_E-fasciculatus_F_contig1538.3776.1 vs. uniprot
Match: A0A8J4GHT7_9CHLO (USP domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GHT7_9CHLO)

HSP 1 Score: 58.9 bits (141), Expect = 4.220e-8
Identity = 25/47 (53.19%), Postives = 36/47 (76.60%), Query Frame = 0
Query:   24 AGVRGMFNLGNTCFMSSVLQAVLHISVMQSFFFEKGHEPARCEKLRK 70
            AG+RG+ NLGNTCFM+SVLQ  +H  +M+++F  +GH  + CE+L K
Sbjct:  160 AGLRGLNNLGNTCFMNSVLQVFIHSPLMRNYFLGQGHSQSTCERLGK 206          
BLAST of mRNA_E-fasciculatus_F_contig1538.3776.1 vs. uniprot
Match: A0A8J4FN91_9CHLO (USP domain-containing protein n=4 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FN91_9CHLO)

HSP 1 Score: 58.9 bits (141), Expect = 4.330e-8
Identity = 25/47 (53.19%), Postives = 36/47 (76.60%), Query Frame = 0
Query:   24 AGVRGMFNLGNTCFMSSVLQAVLHISVMQSFFFEKGHEPARCEKLRK 70
            AG+RG+ NLGNTCFM+SVLQ  +H  +M+++F  +GH  + CE+L K
Sbjct:  221 AGLRGLNNLGNTCFMNSVLQVFIHSPLMRNYFLGQGHSQSTCERLGK 267          
BLAST of mRNA_E-fasciculatus_F_contig1538.3776.1 vs. uniprot
Match: A0A6A6Z1Z9_9PEZI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Mytilinidiaceae TaxID=281242 RepID=A0A6A6Z1Z9_9PEZI)

HSP 1 Score: 58.5 bits (140), Expect = 5.640e-8
Identity = 23/45 (51.11%), Postives = 35/45 (77.78%), Query Frame = 0
Query:   23 AAGVRGMFNLGNTCFMSSVLQAVLHISVMQSFFFEKGHEPARCEK 67
            A G+RG++N+G TCFMS +LQ +LH   +++F+  +GH+PA CEK
Sbjct:  179 AIGLRGLYNMGQTCFMSVILQTLLHNPFVRNFYLAEGHKPADCEK 223          
BLAST of mRNA_E-fasciculatus_F_contig1538.3776.1 vs. uniprot
Match: A0A4U0V5B2_9PEZI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Friedmanniomyces endolithicus TaxID=329885 RepID=A0A4U0V5B2_9PEZI)

HSP 1 Score: 58.2 bits (139), Expect = 7.750e-8
Identity = 27/67 (40.30%), Postives = 42/67 (62.69%), Query Frame = 0
Query:   10 PPVLLSPARSRL---------VAAGVRGMFNLGNTCFMSSVLQAVLHISVMQSFFFEKGHEPARCEK 67
            PP    P RS L          A G+RGM+N+G TCFMS +LQ++LH  +++++F  +GH+ + CE+
Sbjct:   95 PPTSTEPTRSLLRANAAPTPCAATGLRGMYNMGQTCFMSVILQSLLHNPLLRTWFLSEGHKSSDCER 161          
BLAST of mRNA_E-fasciculatus_F_contig1538.3776.1 vs. uniprot
Match: A0A8E2JK35_9PEZI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Lepidopterella palustris CBS 459.81 TaxID=1314670 RepID=A0A8E2JK35_9PEZI)

HSP 1 Score: 57.8 bits (138), Expect = 1.050e-7
Identity = 22/45 (48.89%), Postives = 35/45 (77.78%), Query Frame = 0
Query:   23 AAGVRGMFNLGNTCFMSSVLQAVLHISVMQSFFFEKGHEPARCEK 67
            A G+RG++N+G TCFMS +LQ ++H   +++F+  +GH+PA CEK
Sbjct:  178 AIGLRGLYNMGQTCFMSVILQTLIHNPFIRNFYLAEGHKPADCEK 222          
BLAST of mRNA_E-fasciculatus_F_contig1538.3776.1 vs. uniprot
Match: W7TMS7_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMS7_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.130e-7
Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 0
Query:   11 PVLLSPARSRLVAAGVRGMFNLGNTCFMSSVLQAVLHISVMQSFFFEKGHEPARCEK 67
            P+L  P+  R    G+RG  NLG+TCFMS +LQA+LH  V++ FF  + H  A C K
Sbjct:  144 PLLAQPSLVRHATYGLRGFCNLGSTCFMSCILQALLHNPVLKDFFLRRRHSLATCPK 200          
BLAST of mRNA_E-fasciculatus_F_contig1538.3776.1 vs. uniprot
Match: A0A1Y2LRH3_EPING (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Epicoccum nigrum TaxID=105696 RepID=A0A1Y2LRH3_EPING)

HSP 1 Score: 57.4 bits (137), Expect = 1.430e-7
Identity = 25/62 (40.32%), Postives = 41/62 (66.13%), Query Frame = 0
Query:   23 AAGVRGMFNLGNTCFMSSVLQAVLHISVMQSFFFEKGHEPARCEKLRKETTKLRSQILQYDS 84
            A G+RG++N+G TCFMS +LQ ++H   +++FF  +GH+ A CEK    +  L   I+++ S
Sbjct:  172 ATGLRGLYNMGQTCFMSVILQTIVHNPFIRNFFLAEGHKTADCEKESCVSCALDEMIVEFHS 233          
BLAST of mRNA_E-fasciculatus_F_contig1538.3776.1 vs. uniprot
Match: A0A4U0V4E5_9PEZI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Friedmanniomyces endolithicus TaxID=329885 RepID=A0A4U0V4E5_9PEZI)

HSP 1 Score: 57.4 bits (137), Expect = 1.440e-7
Identity = 29/69 (42.03%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    8 SPPPVLLSPARSRL---------VAAGVRGMFNLGNTCFMSSVLQAVLHISVMQSFFFEKGHEPARCEK 67
            SPPP    P RS L          A G+RGM+N+G TCFMS +LQ++LH  +++++F  +GH+ + CE+
Sbjct:   51 SPPPST-EPTRSLLRANAAPTPCAATGLRGMYNMGQTCFMSVILQSLLHNPLLRTWFLSEGHKSSDCER 118          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1538.3776.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIM1_ECTSI2.140e-4797.73Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9D8F2_9STRA2.280e-847.37Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nann... [more]
A0A8J4GHT7_9CHLO4.220e-853.19USP domain-containing protein n=1 Tax=Volvox retic... [more]
A0A8J4FN91_9CHLO4.330e-853.19USP domain-containing protein n=4 Tax=Volvox retic... [more]
A0A6A6Z1Z9_9PEZI5.640e-851.11Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Myti... [more]
A0A4U0V5B2_9PEZI7.750e-840.30Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Frie... [more]
A0A8E2JK35_9PEZI1.050e-748.89Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Lepi... [more]
W7TMS7_9STRA1.130e-747.37Ubiquitinyl hydrolase 1 n=1 Tax=Nannochloropsis ga... [more]
A0A1Y2LRH3_EPING1.430e-740.32Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Epic... [more]
A0A4U0V4E5_9PEZI1.440e-742.03Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Frie... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 28..65
e-value: 1.1E-7
score: 31.7
NoneNo IPR availableGENE3D3.90.70.10coord: 21..91
e-value: 4.2E-11
score: 44.7
NoneNo IPR availablePANTHERPTHR21646FAMILY NOT NAMEDcoord: 20..78
IPR037798Ubiquitin carboxyl-terminal hydrolase 8PANTHERPTHR21646:SF33UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 22coord: 20..78
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 28..43
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 27..92
score: 10.405
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 22..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1538contigE-fasciculatus_F_contig1538:636..1224 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1538.3776.1mRNA_E-fasciculatus_F_contig1538.3776.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1538 635..1224 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1538.3776.1 ID=prot_E-fasciculatus_F_contig1538.3776.1|Name=mRNA_E-fasciculatus_F_contig1538.3776.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=92bp
PAGKERASPPPVLLSPARSRLVAAGVRGMFNLGNTCFMSSVLQAVLHISV
MQSFFFEKGHEPARCEKLRKETTKLRSQILQYDSNASFDNHP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain-like_cys_pep_sf
IPR028889USP_dom
IPR018200USP_CS
IPR037798UBP8
IPR001394Peptidase_C19_UCH