prot_E-fasciculatus_F_contig15216.3689.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15216.3689.1
Unique Nameprot_E-fasciculatus_F_contig15216.3689.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length152
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15216.3689.1 vs. uniprot
Match: A0A6H5KYL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYL0_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 4.170e-64
Identity = 110/151 (72.85%), Postives = 116/151 (76.82%), Query Frame = 0 
Query:    1 MKGIQTLDISSNKLSLAGAKALAKALWRCRSLHEIVLEESVAADDTAAVSAVFKEYMPWATVRVDDRDGRKNLARRYLAAGGGHGQAYDAADXXXXXXXXXXXXXXXXXXXXHGDNGDLGFGLMDPHHWEAVDAESDGEVPPELMMDDDTD 151
            M GIQTLDISSN+LSL GAKALAKALWRCRSLHEIVLEESV  DD AAVSAVFKEYMPWATVRVDDRDGRKNLARRYLAA GG GQA+DA                      +G   D+ F +M PHHWEAVDAESDGEVPPEL+MDDDTD
Sbjct:  232 MTGIQTLDISSNQLSLTGAKALAKALWRCRSLHEIVLEESVVPDDAAAVSAVFKEYMPWATVRVDDRDGRKNLARRYLAAAGGQGQAHDAV------ADDQGAFSDEEGGDNNGQEDDVVFDMMGPHHWEAVDAESDGEVPPELVMDDDTD 376
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15216.3689.1 vs. uniprot
Match: D7FZG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG4_ECTSI)

HSP 1 Score: 214 bits (546), Expect = 5.000e-64
Identity = 128/152 (84.21%), Postives = 129/152 (84.87%), Query Frame = 0 
Query:    1 MKGIQTLDISSNKLSLAGAKALAKALWRCRSLHEIVLEESVAADDTAAVSAVFKEYMPWATVRVDDRDGRKNLARRYLAAGGGHGQAYDA-ADXXXXXXXXXXXXXXXXXXXXHGDNGDLGFGLMDPHHWEAVDAESDGEVPPELMMDDDTD 151
            M GIQTLDISSN+LSL GAKALAKALWRCRSLHEIVLEESV  DDTAAVSAVFKEYMPWATVRVDDRDGRKNLARRYLAA GG GQAYDA AD       XXXXXXXXXXXX        GF LMDPHHWEAVDAESDGEVPPELMMDDDTD
Sbjct:  449 MTGIQTLDISSNQLSLTGAKALAKALWRCRSLHEIVLEESVVPDDTAAVSAVFKEYMPWATVRVDDRDGRKNLARRYLAAAGGQGQAYDALADDQGAFDDXXXXXXXXXXXXG-------GFDLMDPHHWEAVDAESDGEVPPELMMDDDTD 593
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15216.3689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYL0_9PHAE4.170e-6472.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZG4_ECTSI5.000e-6484.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..56
e-value: 6.8E-7
score: 30.9
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 3..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15216contigE-fasciculatus_F_contig15216:113..2328 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15216.3689.1mRNA_E-fasciculatus_F_contig15216.3689.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15216 86..2328 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15216.3689.1 ID=prot_E-fasciculatus_F_contig15216.3689.1|Name=mRNA_E-fasciculatus_F_contig15216.3689.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=152bp
MKGIQTLDISSNKLSLAGAKALAKALWRCRSLHEIVLEESVAADDTAAVS
AVFKEYMPWATVRVDDRDGRKNLARRYLAAGGGHGQAYDAADDDQGAFSD
DEEDGDNNNGGGHGDNGDLGFGLMDPHHWEAVDAESDGEVPPELMMDDDT
D*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf