prot_E-fasciculatus_F_contig15161.3656.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15161.3656.1
Unique Nameprot_E-fasciculatus_F_contig15161.3656.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length160
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15161.3656.1 vs. uniprot
Match: A0A6H5KN12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN12_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 2.220e-49
Identity = 108/154 (70.13%), Postives = 112/154 (72.73%), Query Frame = 0 
Query:    2 LLSALLLLVRGETAAAPPAAFAGGYRLRLAVSESCGRTLLSAGGGGISYRDRDRVCLMAAAGEDKEEEKMELAAEVVGAMTKATVGFAVDRAAATVSEEQGLPPRTRPASQQESAGTKRSALVGLLGNFVAFLKADDVPSPPGHSPTSTAEGRQ 155
            LLSALLLLV G+TAAAPPA F GG RLRLA                    +RDRVCLMA         KMELAAEVVGA+TKATVGFAVDRAAATVSEEQGLPPRTR ASQQE AG KR ALVGLLGNFVAFLK DD  SPPG+ PT TAEGRQ
Sbjct:    2 LLSALLLLVMGKTAAAPPATFVGGCRLRLAAXXXXXXXXXXXX---XXSHNRDRVCLMAXXXXXXXXXKMELAAEVVGAVTKATVGFAVDRAAATVSEEQGLPPRTRAASQQEWAGAKRKALVGLLGNFVAFLKTDDDASPPGNPPTLTAEGRQ 152
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BLAST of mRNA_E-fasciculatus_F_contig15161.3656.1 vs. uniprot
Match: D7G9I8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I8_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 7.230e-27
Identity = 66/77 (85.71%), Postives = 67/77 (87.01%), Query Frame = 0 
Query:    2 LLSALLLLVRGETAAAPPAAFAGGYRLRLAVSESCGRTLLSAGGGGISYRDRDRVCLMAAAGEDKEEE-KMELAAEV 77
            LLS LLLLVRGETAAAPPAAF G  RLRLA SES GRT LSAGGGGISY  R+RVCLMAAAGEDKEEE KMELAAEV
Sbjct:    2 LLSTLLLLVRGETAAAPPAAFVGDCRLRLAASESGGRTALSAGGGGISYA-RNRVCLMAAAGEDKEEEEKMELAAEV 77
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15161.3656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KN12_9PHAE2.220e-4970.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9I8_ECTSI7.230e-2785.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..160
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.773

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15161contigE-fasciculatus_F_contig15161:2..1398 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15161.3656.1mRNA_E-fasciculatus_F_contig15161.3656.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15161 2..1398 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15161.3656.1 ID=prot_E-fasciculatus_F_contig15161.3656.1|Name=mRNA_E-fasciculatus_F_contig15161.3656.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=160bp
VLLSALLLLVRGETAAAPPAAFAGGYRLRLAVSESCGRTLLSAGGGGISY
RDRDRVCLMAAAGEDKEEEKMELAAEVVGAMTKATVGFAVDRAAATVSEE
QGLPPRTRPASQQESAGTKRSALVGLLGNFVAFLKADDVPSPPGHSPTST
AEGRQVCRGG
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