prot_E-fasciculatus_F_contig15.3540.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15.3540.1
Unique Nameprot_E-fasciculatus_F_contig15.3540.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length184
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15.3540.1 vs. uniprot
Match: D8LTK9_ECTSI (Ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK9_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 1.070e-75
Identity = 127/154 (82.47%), Postives = 132/154 (85.71%), Query Frame = 0 
Query:   31 TPADTTAGDAAHGRLSGGETVHARRYSGTAESGRVAEKEEGEELPALPAGDAENPTTDAGLAEHVGSSEPPLP--DGWEAVDVGDGNIYYHHVPSGLTQWEVPREEDPHEITTAVAATPPDGNSWEEFKTEEGVPFWYNSSTGESSWLSPGHPV 182
            T A   AGDAAHG+LSGGETVH RRYS  AES    EKEEG ELPA PAGDAEN TTDAGLAEHVG SEPPLP  DGWEAVDVGDG+IYYHHV SGLTQWEVPREE+PHEITTA+AATPPDG+ WEEFKTEEGVPFWYNSSTGESSW  PGHP 
Sbjct: 1034 TQAAAVAGDAAHGQLSGGETVHTRRYSEIAESSHGTEKEEGGELPAFPAGDAENATTDAGLAEHVGGSEPPLPLPDGWEAVDVGDGSIYYHHVLSGLTQWEVPREEEPHEITTAMAATPPDGSPWEEFKTEEGVPFWYNSSTGESSWSPPGHPA 1187
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15.3540.1 vs. uniprot
Match: A0A7J6RUZ7_PEROL (Uncharacterized protein (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6RUZ7_PEROL)

HSP 1 Score: 63.5 bits (153), Expect = 1.420e-8
Identity = 35/103 (33.98%), Postives = 50/103 (48.54%), Query Frame = 0 
Query:  102 LPDGWEAVDVGDGNIYYHHVPSGLTQWEVP---------REEDPHEITTAVA-----------------ATPPDGNSWEEFKTEEGVPFWYNSSTGESSWLSP 178
            LP GWE     DG  YY++  SG+TQWE+P         +E +  ++   VA                 A P D   WEEFK ++G P++YN+ TG++ W  P
Sbjct:   19 LPAGWEEFTADDGTPYYYNSNSGVTQWELPTQASAVEGVQEVEESKVDDGVAQKNEPAVESKVVEVTKEALPAD---WEEFKADDGTPYYYNTKTGQTQWEYP 118
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15.3540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTK9_ECTSI1.070e-7582.47Ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A7J6RUZ7_PEROL1.420e-833.98Uncharacterized protein (Fragment) n=1 Tax=Perkins... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 148..180
e-value: 0.002
score: 27.4
coord: 101..133
e-value: 3.6E-7
score: 39.8
IPR001202WW domainPFAMPF00397WWcoord: 152..177
e-value: 4.5E-7
score: 29.8
coord: 102..131
e-value: 1.8E-6
score: 27.9
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 106..131
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 147..180
score: 11.349
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 100..133
score: 13.26
NoneNo IPR availableGENE3D2.20.70.10coord: 151..180
e-value: 5.1E-8
score: 34.2
NoneNo IPR availableGENE3D2.20.70.10coord: 85..138
e-value: 1.7E-9
score: 39.0
NoneNo IPR availablePANTHERPTHR11864:SF0PRP40 PRE-MRNA PROCESSING FACTOR 40 HOMOLOG A (YEAST)coord: 90..178
IPR039726Pre-mRNA-processing factor Prp40PANTHERPTHR11864PRE-MRNA-PROCESSING PROTEIN PRP40coord: 90..178
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 144..178
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 98..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15contigE-fasciculatus_F_contig15:52495..53046 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15.3540.1mRNA_E-fasciculatus_F_contig15.3540.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15 52495..53046 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15.3540.1 ID=prot_E-fasciculatus_F_contig15.3540.1|Name=mRNA_E-fasciculatus_F_contig15.3540.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=184bp
RSSFVGSVARNVSVSSSSVTGGVSDGDASATPADTTAGDAAHGRLSGGET
VHARRYSGTAESGRVAEKEEGEELPALPAGDAENPTTDAGLAEHVGSSEP
PLPDGWEAVDVGDGNIYYHHVPSGLTQWEVPREEDPHEITTAVAATPPDG
NSWEEFKTEEGVPFWYNSSTGESSWLSPGHPVD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036020WW_dom_sf
IPR039726Prp40-like
IPR001202WW_dom