prot_E-fasciculatus_F_contig1469.3364.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1469.3364.1
Unique Nameprot_E-fasciculatus_F_contig1469.3364.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length739
Homology
BLAST of mRNA_E-fasciculatus_F_contig1469.3364.1 vs. uniprot
Match: A0A6H5K6J9_9PHAE (IF3_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6J9_9PHAE)

HSP 1 Score: 801 bits (2068), Expect = 6.410e-282
Identity = 532/747 (71.22%), Postives = 563/747 (75.37%), Query Frame = 0
Query:    1 MASRFLRADLRRACRPPSKLTSSSSRNTFLSLGTTR-DHPSLAPSACNPSALTAAALASPEWLHSSVQSSSHAHSELATTRSGSVEHGLRLPVPVTVTGMLPTPALTSAGEQRDAYVGCWKG-AVGLGLCSRQSRQQQQAGRRFLSSRSSKAGGQTLTNEKIRAGKILLVLETKDGSKEVTVVSRQQALAAANAANLDLVQVSTGKNDQVVCRLMDFKKEEYRKKKQKKANAKRIQKKKEIRLGGMIADHDFDRKVNDVKKYLERGDLVKVVLEANISLLKRSGNCLNVLQEKFEEQMEGYEGVVLKHSGGGNGYTRREIECIPKTVRPTXXXXXXXAPEAPGGDGGTIPEAGEKENLKPPPPRSGVVDKDVMREILRGAAETAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDVTESVSPLQLGSTVISLDDVELYSDLVDETVDNDVDLDLERERNEARRXXXXXXXXXXXXK--NAARYDSMRGXXXXXARKKWKAEIGREGGRDGDNFDGESGWGEKDDRRTARRAPKGREKQDSGRRGVAGGDRRAGASGRGDSPKGWSTGGGRRDGPVSNVSQQNRAGSFRRGGVRTSDG---PRVGPPPPSPARAVRKPYKWRTSIADAKVAEAGGDRDEASAKPWYSRSSSAASLARAARTNDGSGANAAT--EEIRGFKARLGGGSVNPMPANPVAAGTAKATSRQGFRSSSVTASPVKVKPPRVSETGSDQGVGGEE 738
            MASRFLRADLRR  RP  + TSS+S N FLSL TTR D PS+APSA +PSALTAAAL S EWL SSVQSS HAHSE AT+RSGS EHG RLP+PVT  GM    ALTSA EQR  YVGCW+G AVGLGLCSRQ   QQQAG+RFLSSRS KAGGQTLTN+KI+A KILLVLET+DGSK  T VSRQQALAAANA NLDLVQVS+G+NDQVVCRLMDFKKEEYRKKKQ+KANAKRIQKKKEIRL GMIADHDF RKVNDVKKYLERGD+VKVVLEANISLLKRSGNCLNVLQEKFEEQME YEG VLKHSGGGNGYTRREIECIPKTVRPT       A EAPG DGG IPEAGEKEN  PPP R GVVDK V+ E++ GAA TA G            XXXXXXXXXXXXXXXXXXXXXXX +DV E+ SPL+LGST I LDDVELY DLVDETV +D D+  ERERNEARR            K  NAARY   RGXXXXX     KAEI         NFD ESGWGEKDDRRTARR P GR++Q  GRRGVAGGD RAGAS  G SPK WSTGGGRRDG   NV QQ  AGSFRRG  R SDG   PR GPPP SPA A R PYKWRTSIADAKV EAGGDR+  SAKPWY+                          EE+RGFKAR GGGS+N  P N VA  TAKATS QGFRSSSVTA   KV PP+ SE GSD+GV GEE
Sbjct:    1 MASRFLRADLRRVFRPLGRPTSSNS-NAFLSLATTRPDEPSVAPSAYSPSALTAAALDSSEWLCSSVQSSGHAHSESATSRSGSSEHGPRLPLPVT--GMFL--ALTSA-EQR--YVGCWRGGAVGLGLCSRQ---QQQAGKRFLSSRSGKAGGQTLTNKKIKAEKILLVLETEDGSKTATTVSRQQALAAANAVNLDLVQVSSGRNDQVVCRLMDFKKEEYRKKKQRKANAKRIQKKKEIRLRGMIADHDFGRKVNDVKKYLERGDVVKVVLEANISLLKRSGNCLNVLQEKFEEQMEEYEGAVLKHSGGGNGYTRREIECIPKTVRPTTAKPTTSASEAPGRDGGGIPEAGEKENPIPPPSRGGVVDKHVVLEVVSGAAATAHGGSEGELSSSNSGXXXXXXXXXXXXXXXXXXXXXXXXEDVAETASPLKLGSTEILLDDVELYDDLVDETVYDDGDI--ERERNEARRREDRQKREEAKEKVRNAARYAPTRGXXXXXXXXXXKAEIDXXXXXXXXNFDEESGWGEKDDRRTARRVPTGRDQQTGGRRGVAGGDSRAGASDSGGSPKVWSTGGGRRDGSFPNVLQQG-AGSFRRGDRRGSDGGSGPREGPPPSSPALAARAPYKWRTSIADAKVVEAGGDREGTSAKPWYTSXXXXXXXXXXXXXXXXXXXXXXXXXEEVRGFKARFGGGSMNLTPTNSVAVRTAKATSSQGFRSSSVTAPSAKVNPPKASEVGSDRGVDGEE 733          
BLAST of mRNA_E-fasciculatus_F_contig1469.3364.1 vs. uniprot
Match: D7FJ50_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ50_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 1.310e-44
Identity = 87/92 (94.57%), Postives = 89/92 (96.74%), Query Frame = 0
Query:  213 MDFKKEEYRKKKQKKANAKRIQKKKEIRLGGMIADHDFDRKVNDVKKYLERGDLVKVVLEANISLLKRSGNCLNVLQEKFEEQMEGYEGVVL 304
            MDFKKEEYRKKKQKKANAKRIQKKKEIRLGGMIADHDF RKVNDVKKYLERGD+VKVVLEANISLLKRSGNCLNVLQEKFEEQME YEGV +
Sbjct:    1 MDFKKEEYRKKKQKKANAKRIQKKKEIRLGGMIADHDFGRKVNDVKKYLERGDVVKVVLEANISLLKRSGNCLNVLQEKFEEQMEEYEGVRM 92          
BLAST of mRNA_E-fasciculatus_F_contig1469.3364.1 vs. uniprot
Match: UPI000C7C0A36 (translation initiation factor IF-3 n=1 Tax=Salirhabdus sp. Marseille-P4669 TaxID=2042310 RepID=UPI000C7C0A36)

HSP 1 Score: 79.0 bits (193), Expect = 3.170e-13
Identity = 52/119 (43.70%), Postives = 78/119 (65.55%), Query Frame = 0
Query:  152 GQTLTNEKIRAGKILLVLETKDGSKEVTVVSRQQALAAANAANLDLVQVSTGKNDQVVCRLMDFKKEEYRKKKQKKANAKR--IQKKKEIRLGGMIADHDFDRKVNDVKKYLERGDLVK 268
            G+TL NEKIRA ++ L+   KDG +++ V SRQ+AL  A  A LDLV V+      V CR+MD+ K  + ++K++K N K+  +   KE+RL   I +HDF+ K+ + +K+LE+GD VK
Sbjct:   13 GETLINEKIRAREVRLI--GKDG-EQIGVKSRQEALEIAERAELDLVMVAPNAKPPV-CRIMDYGKYRFEQQKKEKENRKKQKVINVKEVRLSPAIEEHDFNTKLRNARKFLEKGDKVK 127          
BLAST of mRNA_E-fasciculatus_F_contig1469.3364.1 vs. uniprot
Match: A0A1V4I734_9FIRM (Translation initiation factor IF-3 n=1 Tax=[Clostridium] thermoalcaliphilum TaxID=29349 RepID=A0A1V4I734_9FIRM)

HSP 1 Score: 72.8 bits (177), Expect = 4.810e-11
Identity = 52/123 (42.28%), Postives = 73/123 (59.35%), Query Frame = 0
Query:  157 NEKIRAGKILLVLETKDGSKEVTVVSRQQALAAANAANLDLVQVSTGKNDQVVCRLMDF--------KKEEYRKKKQKKANAKRIQKKKEIRLGGMIADHDFDRKVNDVKKYLERGDLVKVVL 271
            NE+IR  +I ++L   DG +++ ++S ++A   A   NLDLV++S   N  V C++MDF        KKE+  KKKQK  N K      EIRL  +I +HD   K N  KK+LE+GD VKVV+
Sbjct:   24 NEQIRDKEIRVIL---DGGEQLGIMSAKEAQLIATQKNLDLVKISPNANPPV-CKIMDFGKYKYEQSKKEKXSKKKQKVINVK------EIRLRPVIEEHDLTTKGNQAKKFLEKGDKVKVVV 136          
BLAST of mRNA_E-fasciculatus_F_contig1469.3364.1 vs. uniprot
Match: UPI00048C0F73 (translation initiation factor IF-3 n=3 Tax=Thalassobacillus TaxID=331971 RepID=UPI00048C0F73)

HSP 1 Score: 71.6 bits (174), Expect = 7.920e-11
Identity = 58/155 (37.42%), Postives = 89/155 (57.42%), Query Frame = 0
Query:  157 NEKIRAGKILLVLETKDGSKEVTVVSRQQALAAANAANLDLVQVSTGKNDQVVCRLMDFKKEEY-RKKKQKKANAKRIQ-KKKEIRLGGMIADHDFDRKVNDVKKYLERGDLVKVVL----------EANISLLKRSGN-CLNVLQEKFEEQMEG 298
            NEKIRA ++ L+    +  +++ V SRQ+AL  A  ANLDLV V+      V CR+MD+ K  + ++KK K+A  K+   K KE+RL   I +HDF+ K+ + +K+LE+GD VK  +          E    +L+R    C +V Q + + +MEG
Sbjct:    4 NEKIRAREVRLI---DNNGEQLGVKSRQEALEIAQNANLDLVLVAPNAKPPV-CRIMDYGKYRFEQQKKDKEARKKQTTIKVKEVRLSPGIEEHDFNTKLRNARKFLEKGDKVKASVRFRGRAITHKELGQKVLERMAEECKDVAQVETKPKMEG 154          
BLAST of mRNA_E-fasciculatus_F_contig1469.3364.1 vs. uniprot
Match: A0A6B9YDN8_9BACI (Translation initiation factor IF-3 n=4 Tax=Bacillaceae TaxID=186817 RepID=A0A6B9YDN8_9BACI)

HSP 1 Score: 72.0 bits (175), Expect = 9.060e-11
Identity = 52/124 (41.94%), Postives = 78/124 (62.90%), Query Frame = 0
Query:  152 GQTLTNEKIRAGKILLVLETKDGSKEVTVVSRQQALAAANAANLDLVQVSTGKNDQVVCRLMDFKKEEYRKKKQKKANAKRIQKK----KEIRLGGMIADHDFDRKVNDVKKYLERGDLVKVVL 271
            G+TL NE+IRA ++ L+    DG +++ V SRQ+AL  A+ ANLDLV V+      V CR+MD+ K  YR ++QKK       +K    KE+RL   I +HDF+ K+ + +K+L++GD VK  +
Sbjct:   19 GETLINERIRAREVRLI--GADG-EQIGVKSRQEALKIADQANLDLVLVAPNAKPPV-CRIMDYGK--YRFEQQKKEXXXXXXQKVINIKEVRLSPAIEEHDFNTKLRNARKFLQKGDKVKAAV 136          
BLAST of mRNA_E-fasciculatus_F_contig1469.3364.1 vs. uniprot
Match: V6J0U9_9BACL (Translation initiation factor IF-3 n=11 Tax=Sporolactobacillus TaxID=2077 RepID=V6J0U9_9BACL)

HSP 1 Score: 71.2 bits (173), Expect = 1.080e-10
Identity = 53/143 (37.06%), Postives = 83/143 (58.04%), Query Frame = 0
Query:  155 LTNEKIRAGKILLVLETKDGSKEVTVVSRQQALAAANAANLDLVQVSTGKNDQVVCRLMDFKK---EEYRKKKQKKANAKRIQKKKEIRLGGMIADHDFDRKVNDVKKYLERGDLVKVVLEANISLLKRSGNCLNVLQEKFEE 294
            + NE IRA ++ L+ +     ++V + S+ +ALA A+  NLDLV V+ G    V CR+MD+ K   E+ +K+++ + N K I  K EIRL   I +HDF+ K+ + KK+LE+GD VK  +      +  S     VL++  EE
Sbjct:    2 IVNEGIRAQQVRLIGQN---GEQVGIKSKAEALAMAHNVNLDLVMVAPGAKPPV-CRIMDYGKFRFEQQKKEREARKNQKVINLK-EIRLSPSIEEHDFNTKMRNAKKFLEKGDKVKASVRFRGRAITHSNLGKQVLEKLAEE 139          
BLAST of mRNA_E-fasciculatus_F_contig1469.3364.1 vs. uniprot
Match: A0A4Q4JJ08_9BACL (Translation initiation factor IF-3 n=1 Tax=Sporolactobacillus sp. THM7-7 TaxID=2511172 RepID=A0A4Q4JJ08_9BACL)

HSP 1 Score: 70.9 bits (172), Expect = 1.430e-10
Identity = 55/159 (34.59%), Postives = 89/159 (55.97%), Query Frame = 0
Query:  155 LTNEKIRAGKILLVLETKDGSKEVTVVSRQQALAAANAANLDLVQVSTGKNDQVVCRLMDFKKEEYRKKKQKKANAKRIQKK----KEIRLGGMIADHDFDRKVNDVKKYLERGDLVKV--------VLEANIS---LLKRSGNCLNVLQEKFEEQMEG 298
            + NE IRA K+ L+ +     +++ + S+ +AL  A+  NLDLV V+ G    V CR+MD+ K  YR ++QKK    R ++K    KEIRL   I +HDF+ K+ + KK+L++GD VK         +  +N+    L K + +C ++   +   +MEG
Sbjct:    1 MINEGIRASKVRLIGQN---GEQIGIKSKNEALTIASRVNLDLVMVAPGAKPPV-CRIMDYGK--YRYEQQKKEREARKKQKVINIKEIRLSPSIEEHDFNTKMRNAKKFLQKGDKVKASVRFRGRAITHSNLGRQVLEKLAESCADISVIEARPKMEG 153          
BLAST of mRNA_E-fasciculatus_F_contig1469.3364.1 vs. uniprot
Match: A0A4Q4IMJ1_9BACL (Translation initiation factor IF-3 n=1 Tax=Sporolactobacillus sp. THM7-4 TaxID=2511170 RepID=A0A4Q4IMJ1_9BACL)

HSP 1 Score: 70.9 bits (172), Expect = 1.460e-10
Identity = 55/142 (38.73%), Postives = 80/142 (56.34%), Query Frame = 0
Query:  157 NEKIRAGKILLVLETKDGSKEVTVVSRQQALAAANAANLDLVQVSTGKNDQVVCRLMDFKKEEYRKKKQKKANAKRIQKK----KEIRLGGMIADHDFDRKVNDVKKYLERGDLVKVVLEANISLLKRSGNCLNVLQEKFEE 294
            NE IRA ++ L+ +     ++V + SR +ALA A   NLDLV V+ G    V CR+MD+ +  YR ++QKK    R  +K    KEIRL   I +HDF+ K+ + KK+LE+GD VK  +      +  S     VL++  EE
Sbjct:    4 NEGIRAQQVRLIGQN---GEQVGIKSRTEALAMARQVNLDLVMVAPGARPPV-CRIMDYGR--YRYEQQKKDREARKNQKVISIKEIRLSPSIEEHDFNTKMRNAKKFLEKGDKVKASVRFRGRAITHSDLGRQVLEKLAEE 139          
BLAST of mRNA_E-fasciculatus_F_contig1469.3364.1 vs. uniprot
Match: A0A345PI24_9BACI (Translation initiation factor IF-3 n=4 Tax=Oceanobacillus TaxID=182709 RepID=A0A345PI24_9BACI)

HSP 1 Score: 70.5 bits (171), Expect = 2.040e-10
Identity = 51/123 (41.46%), Postives = 70/123 (56.91%), Query Frame = 0
Query:  157 NEKIRAGKILLVLETKDGSKEVTVVSRQQALAAANAANLDLVQVSTGKNDQVVCRLMDF--------KKEEYRKKKQKKANAKRIQKKKEIRLGGMIADHDFDRKVNDVKKYLERGDLVKVVL 271
            NEKIRA ++ L+    D   ++ V +RQ+AL  A   NLDLV V+ G    V CR+MDF        KKE+  +KKQK  N K      E+R    I +HDF+ K+ + KK+LE+GD VK  +
Sbjct:    5 NEKIRAREVRLIDSNGD---QLGVKTRQEALEIAQTRNLDLVMVAPGAKPPV-CRIMDFGKHRFELQKKEKEARKKQKVINIK------EVRFTPGIGEHDFETKLKNAKKFLEKGDKVKAAV 117          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1469.3364.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6J9_9PHAE6.410e-28271.22IF3_N domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FJ50_ECTSI1.310e-4494.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI000C7C0A363.170e-1343.70translation initiation factor IF-3 n=1 Tax=Salirha... [more]
A0A1V4I734_9FIRM4.810e-1142.28Translation initiation factor IF-3 n=1 Tax=[Clostr... [more]
UPI00048C0F737.920e-1137.42translation initiation factor IF-3 n=3 Tax=Thalass... [more]
A0A6B9YDN8_9BACI9.060e-1141.94Translation initiation factor IF-3 n=4 Tax=Bacilla... [more]
V6J0U9_9BACL1.080e-1037.06Translation initiation factor IF-3 n=11 Tax=Sporol... [more]
A0A4Q4JJ08_9BACL1.430e-1034.59Translation initiation factor IF-3 n=1 Tax=Sporola... [more]
A0A4Q4IMJ1_9BACL1.460e-1038.73Translation initiation factor IF-3 n=1 Tax=Sporola... [more]
A0A345PI24_9BACI2.040e-1041.46Translation initiation factor IF-3 n=4 Tax=Oceanob... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 461..483
NoneNo IPR availableCOILSCoilCoilcoord: 213..236
NoneNo IPR availablePANTHERPTHR10938:SF0TRANSLATION INITIATION FACTOR IF-3, MITOCHONDRIALcoord: 133..297
IPR001288Translation initiation factor 3TIGRFAMTIGR00168TIGR00168coord: 157..296
e-value: 2.5E-21
score: 74.0
IPR001288Translation initiation factor 3PANTHERPTHR10938TRANSLATION INITIATION FACTOR IF-3coord: 133..297
IPR019814Translation initiation factor 3, N-terminalPFAMPF05198IF3_Ncoord: 156..228
e-value: 5.4E-16
score: 58.6
IPR019815Translation initiation factor 3, C-terminalPFAMPF00707IF3_Ccoord: 236..272
e-value: 2.7E-7
score: 30.5
IPR036788Translation initiation factor 3 (IF-3), C-terminal domain superfamilyGENE3D3.30.110.10coord: 231..308
e-value: 1.0E-7
score: 33.7
IPR036788Translation initiation factor 3 (IF-3), C-terminal domain superfamilySUPERFAMILY55200Translation initiation factor IF3, C-terminal domaincoord: 235..274
IPR036787Translation initiation factor 3 (IF-3), N-terminal domain superfamilyGENE3D3.10.20.80coord: 152..230
e-value: 9.6E-17
score: 62.7
IPR036787Translation initiation factor 3 (IF-3), N-terminal domain superfamilySUPERFAMILY54364Translation initiation factor IF3, N-terminal domaincoord: 155..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1469contigE-fasciculatus_F_contig1469:1371..6947 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1469.3364.1mRNA_E-fasciculatus_F_contig1469.3364.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1469 1311..7259 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1469.3364.1 ID=prot_E-fasciculatus_F_contig1469.3364.1|Name=mRNA_E-fasciculatus_F_contig1469.3364.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=739bp
MASRFLRADLRRACRPPSKLTSSSSRNTFLSLGTTRDHPSLAPSACNPSA
LTAAALASPEWLHSSVQSSSHAHSELATTRSGSVEHGLRLPVPVTVTGML
PTPALTSAGEQRDAYVGCWKGAVGLGLCSRQSRQQQQAGRRFLSSRSSKA
GGQTLTNEKIRAGKILLVLETKDGSKEVTVVSRQQALAAANAANLDLVQV
STGKNDQVVCRLMDFKKEEYRKKKQKKANAKRIQKKKEIRLGGMIADHDF
DRKVNDVKKYLERGDLVKVVLEANISLLKRSGNCLNVLQEKFEEQMEGYE
GVVLKHSGGGNGYTRREIECIPKTVRPTTAKPTTSAPEAPGGDGGTIPEA
GEKENLKPPPPRSGVVDKDVMREILRGAAETAQGESEGELSSSISGGNSA
GEATNSSWEEESGEDSSSDEDDVTESVSPLQLGSTVISLDDVELYSDLVD
ETVDNDVDLDLERERNEARRREDRRKREEAKEKNAARYDSMRGGGGGGAR
KKWKAEIGREGGRDGDNFDGESGWGEKDDRRTARRAPKGREKQDSGRRGV
AGGDRRAGASGRGDSPKGWSTGGGRRDGPVSNVSQQNRAGSFRRGGVRTS
DGPRVGPPPPSPARAVRKPYKWRTSIADAKVAEAGGDRDEASAKPWYSRS
SSAASLARAARTNDGSGANAATEEIRGFKARLGGGSVNPMPANPVAAGTA
KATSRQGFRSSSVTASPVKVKPPRVSETGSDQGVGGEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036787T_IF-3_N_sf
IPR036788T_IF-3_C_sf
IPR019815Translation_initiation_fac_3_C
IPR019814Translation_initiation_fac_3_N
IPR001288Translation_initiation_fac_3