prot_E-fasciculatus_F_contig1460.3316.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1460.3316.1
Unique Nameprot_E-fasciculatus_F_contig1460.3316.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length62
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1460.3316.1 vs. uniprot
Match: D7FQ03_ECTSI (Elongation factor Ts, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ03_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 1.730e-30
Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0 
Query:    1 RLRKYLETNALTRQAHMVAEGNPRVADHLTSLGEEVGGTVTLEGFARLAVGEREPAPTSSN 61
            RLRKYLETNALTRQAHMVAEGNPRVADHLTSLGEEVGGTVTLEGFARLAVGEREPAP+SS+
Sbjct:  306 RLRKYLETNALTRQAHMVAEGNPRVADHLTSLGEEVGGTVTLEGFARLAVGEREPAPSSSD 366
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1460.3316.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQ03_ECTSI1.730e-3096.72Elongation factor Ts, mitochondrial n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1460contigE-fasciculatus_F_contig1460:17643..17828 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1460.3316.1mRNA_E-fasciculatus_F_contig1460.3316.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1460 17643..17828 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1460.3316.1 ID=prot_E-fasciculatus_F_contig1460.3316.1|Name=mRNA_E-fasciculatus_F_contig1460.3316.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=62bp
RLRKYLETNALTRQAHMVAEGNPRVADHLTSLGEEVGGTVTLEGFARLAV
GEREPAPTSSN*
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