prot_E-fasciculatus_F_contig14598.3309.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14598.3309.1
Unique Nameprot_E-fasciculatus_F_contig14598.3309.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length201
Homology
BLAST of mRNA_E-fasciculatus_F_contig14598.3309.1 vs. uniprot
Match: D8LK31_ECTSI (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK31_ECTSI)

HSP 1 Score: 317 bits (813), Expect = 2.040e-105
Identity = 173/201 (86.07%), Postives = 178/201 (88.56%), Query Frame = 0
Query:    1 EQNFSNYSAFHFFRSKVLPRMVEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGADSC-DSERYENVLRAEAATLGELIEVEGRCKWAEVALLLVSQRLANALDPRPQPPPRSQGDEXXXXXXXXXXXXXXXDGSSKEAAEVRESCRGMAARLSELDPMHGRFYEFVEKGGAVMGGEMERGSACEADR 200
            +QNFSNYSAFHF RSKVLPRMVEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDG DSC DSERYEN+LRAEAATLGELIEVE RCKWAEVALLLVSQRLANAL+PRPQPP R+Q     XXXXXXXXX       S EA EVRESCRGMAARLSELDPMHGRFYEFVEKGG VMGG+  RGSA EADR
Sbjct:  205 KQNFSNYSAFHF-RSKVLPRMVEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGTDSCSDSERYENILRAEAATLGELIEVEVRCKWAEVALLLVSQRLANALEPRPQPP-RAQD----XXXXXXXXXVTAAGNGSTEAGEVRESCRGMAARLSELDPMHGRFYEFVEKGGTVMGGQQMRGSAREADR 399          
BLAST of mRNA_E-fasciculatus_F_contig14598.3309.1 vs. uniprot
Match: A0A835Z1Z5_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z5_9STRA)

HSP 1 Score: 103 bits (257), Expect = 5.860e-23
Identity = 61/178 (34.27%), Postives = 84/178 (47.19%), Query Frame = 0
Query:    2 QNFSNYSAFHFFRSKVLPRMVEEAGHDR-WQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGADSCDS-ERYENVLRAEAATLGELIEVEGRCKWAEVALLLVSQRLANALDPRPQPPPRSQGDEXXXXXXXXXXXXXXXDGSSKEAAEVRESCRGMAARLSELDPMHGRFYE 177
            +NFSNYSAFH+ RSK+LP + E  G      L+  EL++ H A FTEP DQS WWYH FL+ WA +     +  ++Y  +L+ E   + EL+ VE RCKWA V L  +   LA                                     E  E+    R +   L ++DPMH  +Y+
Sbjct:  189 ENFSNYSAFHY-RSKLLPAVAEARGAGGVLTLVEQELEMVHQAFFTEPDDQSAWWYHRFLVGWAAEALHGTEHHDKYPELLQKEVDCIRELLFVEERCKWALVTLHHLLCALARTAQ-------------------------------DTEGVELMAEARSLVTTLVDVDPMHKSYYD 334          
BLAST of mRNA_E-fasciculatus_F_contig14598.3309.1 vs. uniprot
Match: A0A7S2UPE6_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPE6_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 6.180e-19
Identity = 55/120 (45.83%), Postives = 75/120 (62.50%), Query Frame = 0
Query:    1 EQNFSNYSAFHFFRSKVLPR-MVEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWA---DDGADSCDSERYE--NVLRAEAATLGELIEVE-GRCKWAEVALLLVSQRLAN 113
            + NFSN SAFH+ RSK+LP  ++     D+  L  +EL+L  +A+FTEP DQ+ WWYH FLL WA   ++ AD+ D+ + E   +L  EA TL +LIE E  +CKW  +AL  V   L N
Sbjct:  314 DANFSNCSAFHY-RSKLLPWVLIHSDDSDKLALAKEELELVQNAIFTEPDDQTAWWYHRFLLQWAQPNNNDADNDDNVQKEFCQLLEQEAETLRDLIETEENQCKWGFLALHAVLVLLQN 432          
BLAST of mRNA_E-fasciculatus_F_contig14598.3309.1 vs. uniprot
Match: A0A6S8XW41_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8XW41_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 2.030e-17
Identity = 44/118 (37.29%), Postives = 74/118 (62.71%), Query Frame = 0
Query:    2 QNFSNYSAFHFFRSKVLPRM-VEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWA-DDGADSCDSERYENVLRAEAATLGELIEVE-GRCKWAEVALLLVSQRLANALD 116
            QNFSN SAFH+ RSK+LP +  E       +++++EL++  +A+FTEP DQ+ WWY  F+L+W  D+   + D E Y+ +L  E  ++ +L++ E G+CKW  + L +++      L+
Sbjct: 1045 QNFSNGSAFHY-RSKLLPLIHTENESRLTSEVINEELEIIRNAVFTEPDDQTSWWYFRFILSWMRDESTKTLDDEEYKRILYQEWESIHDLVDAEDGQCKWGLLGLHMIATAFCKKLE 1161          
BLAST of mRNA_E-fasciculatus_F_contig14598.3309.1 vs. uniprot
Match: A0A7S1ZUZ6_TRICV (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZUZ6_TRICV)

HSP 1 Score: 87.0 bits (214), Expect = 2.730e-17
Identity = 56/146 (38.36%), Postives = 76/146 (52.05%), Query Frame = 0
Query:    1 EQNFSNYSAFHFFRSKVLPRMV-------EEAGHD--------RWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWA-------------------DDGADSCDSERYENVLRAEAATLGELIEVEG-RCKWAEVALLLVSQRL 111
            E NFSN SAFH+ RSK+LP M+       EE G +        R  L  +ELDL  DA +TEP DQ+ WWYH F+++WA                   D   +  D   + ++L  EA +L +L+E EG RCKW  +AL +V + L
Sbjct:   59 ESNFSNGSAFHY-RSKLLPLMLDMRVRESEEGGEEGEEVAATARIDLAKEELDLVRDAAYTEPDDQTAWWYHRFVVSWASPLTLPHLSHAPAPSSSPPDALLEEEDVLAFVDLLEEEAFSLRDLVEAEGGRCKWGLLALHMVLEVL 203          
BLAST of mRNA_E-fasciculatus_F_contig14598.3309.1 vs. uniprot
Match: A0A0L0SJX5_ALLM3 (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SJX5_ALLM3)

HSP 1 Score: 86.7 bits (213), Expect = 1.140e-16
Identity = 47/106 (44.34%), Postives = 63/106 (59.43%), Query Frame = 0
Query:    2 QNFSNYSAFHFFRSKVLPRMVEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGADSCDSERYENVLRAEAATLGELIEVEGRCKWAEVALLLV 107
            QNFSN+SA+H  RSK+    +++        L+DELDL H+A++TEP DQS W YH +LL  A    D  D+     V RAE A + EL E+E  CKW   AL+ +
Sbjct:  182 QNFSNFSAWHQ-RSKLFAEWLQQTNRAFPDALNDELDLLHNAVYTEPNDQSAWLYHKWLLAQA---VDRLDASALAAVRRAELAVIEELAELESECKWVLGALVFL 283          
BLAST of mRNA_E-fasciculatus_F_contig14598.3309.1 vs. uniprot
Match: UPI000867BEEE (protein prenylyltransferase n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=UPI000867BEEE)

HSP 1 Score: 79.3 bits (194), Expect = 5.190e-14
Identity = 56/190 (29.47%), Postives = 90/190 (47.37%), Query Frame = 0
Query:    1 EQNFSNYSAFHFFRSKVLPRMVEEAGH--DRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGADSCDS-------ERYENVLRAEAATLGELIEVEGRCKWAEVALLLVSQRLANALDPRPQPPPRSQGDEXXXXXXXXXXXXXXXDGSSKEAAEVRESCRGMAARLSELDPMHGRFYEFVEK 181
            ++N SN+SA+H  R+ ++P+++    +   + ++L+ ELDL H A++T+PAD S W YH +LL+     ADS  S       E+ E +LRAE   + EL ++E   KW  ++L+   Q LA                                 G +    E +   R M  RL E+DP+    YE+ E+
Sbjct:  190 QKNLSNFSAWHH-RASLIPKLLSRGQNLTSKEEVLAKELDLLHQAIYTDPADSSSWIYHQYLLSSLTKPADSMPSLTPMDVGEKIE-LLRAEIGVIQELSDMEPEEKWPLLSLVHYKQMLAEL------------------------------SGDADTDEEGKHEIREMLQRLKEIDPLRKGRYEYWEQ 347          
BLAST of mRNA_E-fasciculatus_F_contig14598.3309.1 vs. uniprot
Match: A0A6U3VH48_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3VH48_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 6.630e-14
Identity = 50/140 (35.71%), Postives = 73/140 (52.14%), Query Frame = 0
Query:    2 QNFSNYSAFHFFRSKVLP-----RMVEEAG---------HDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWA------------DDGADSCDSERYENVLRAEAATLGELIEVEGR----CKWAEVALLLVSQRL 111
            +NFSN SAFH+ RSK+LP     R+ E  G          +R  L  +EL+L  +A+FTEP DQ+ WWYH F++TWA            D+   S   + Y  +L+ EA  + +LI  E      CKW  +AL ++ + +
Sbjct:  343 KNFSNCSAFHY-RSKLLPLELNRRIQENLGTATSLADVYEERLDLSQEELELVQNAIFTEPDDQTAWWYHRFVVTWASPITILKKNMEEDEDDKSAIIQAYLALLQDEADPIRDLIATEEEDGSGCKWGLLALHMILENI 481          
BLAST of mRNA_E-fasciculatus_F_contig14598.3309.1 vs. uniprot
Match: A0A7S1D677_CYCTE (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D677_CYCTE)

HSP 1 Score: 75.5 bits (184), Expect = 9.220e-14
Identity = 47/115 (40.87%), Postives = 66/115 (57.39%), Query Frame = 0
Query:    1 EQNFSNYSAFHFFRSKVLPRMVE---EAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGADSCDSERYENVLRAEAATLGELIEVEG-RCKWAEVALLLVSQRL 111
            ++NFSN SAFH+ RSK++P +++   E+G     LL  EL+L H+A+FTEP DQ+ WWY  FLL +              + L+ E A L ELIE E  + KW  + L  V  R+
Sbjct:   23 QENFSNGSAFHY-RSKLIPYLLQISPESG-----LLEQELELVHNAIFTEPDDQTAWWYLEFLLPYLS-----------ASTLQEEVALLRELIEAENEQTKWGLLGLYQVYLRM 120          
BLAST of mRNA_E-fasciculatus_F_contig14598.3309.1 vs. uniprot
Match: A0A8K1CD87_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD87_PYTOL)

HSP 1 Score: 76.3 bits (186), Expect = 5.560e-13
Identity = 57/176 (32.39%), Postives = 82/176 (46.59%), Query Frame = 0
Query:    1 EQNFSNYSAFHFFRSKVLPRMVEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGADSCDSERYENVLRAEAATLGELIEVEGRCKWAEVALLLVSQRLANALDPRPQPPPRSQGDEXXXXXXXXXXXXXXXDGSSKEAAEVRESCRGMAARLSELDPMHGRFY 176
            EQNFSNYSA H  RS  LP+ +        ++L DE+ +   A+FTEP DQS W+Y+ +L+T   D   S  SE  E  L ++   L EL+E+E   KW  V L  + +RL+ A             DE                     A++ +E  R    +L  +DP H ++Y
Sbjct:  181 EQNFSNYSALHH-RSITLPKPLTR------EILHDEIGIVQQAVFTEPDDQSAWFYYRWLVTSMLDVVQSEPSEAVE-FLDSQIQWLLELLEMESEAKWVLVTLADLQRRLSVA----------QTEDEA-------------------SASQAKEQSRVYYKQLLSVDPDHAQYY 319          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14598.3309.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK31_ECTSI2.040e-10586.07Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A835Z1Z5_9STRA5.860e-2334.27Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A7S2UPE6_9STRA6.180e-1945.83Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A6S8XW41_9STRA2.030e-1737.29Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1ZUZ6_TRICV2.730e-1738.36Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A0L0SJX5_ALLM31.140e-1644.34Geranylgeranyl transferase type-2 subunit alpha n=... [more]
UPI000867BEEE5.190e-1429.47protein prenylyltransferase n=1 Tax=Saitoella comp... [more]
A0A6U3VH48_9STRA6.630e-1435.71Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A7S1D677_CYCTE9.220e-1440.87Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A8K1CD87_PYTOL5.560e-1332.39Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002088Protein prenyltransferase, alpha subunitPFAMPF01239PPTAcoord: 36..63
e-value: 3.6E-6
score: 26.5
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 1..23
score: 7.141
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 32..66
score: 12.045
NoneNo IPR availablePANTHERPTHR11129PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNITcoord: 1..178
NoneNo IPR availableSUPERFAMILY48439Protein prenylyltransferasecoord: 1..179
IPR032955Geranylgeranyl transferase type-2 subunit alphaPANTHERPTHR11129:SF2GERANYLGERANYL TRANSFERASE TYPE-2 SUBUNIT ALPHAcoord: 1..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14598contigE-fasciculatus_F_contig14598:1736..3194 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14598.3309.1mRNA_E-fasciculatus_F_contig14598.3309.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14598 1736..3194 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14598.3309.1 ID=prot_E-fasciculatus_F_contig14598.3309.1|Name=mRNA_E-fasciculatus_F_contig14598.3309.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=201bp
EQNFSNYSAFHFFRSKVLPRMVEEAGHDRWQLLSDELDLTHDAMFTEPAD
QSVWWYHHFLLTWADDGADSCDSERYENVLRAEAATLGELIEVEGRCKWA
EVALLLVSQRLANALDPRPQPPPRSQGDETNNAGGGVTTTAAAGDGSSKE
AAEVRESCRGMAARLSELDPMHGRFYEFVEKGGAVMGGEMERGSACEADR
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032955RabGGTase_alpha
IPR002088Prenyl_trans_a