prot_E-fasciculatus_F_contig13832.2824.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13832.2824.1
Unique Nameprot_E-fasciculatus_F_contig13832.2824.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length221
Homology
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: A0A6H5JK68_9PHAE (Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK68_9PHAE)

HSP 1 Score: 384 bits (986), Expect = 2.530e-127
Identity = 203/222 (91.44%), Postives = 209/222 (94.14%), Query Frame = 0
Query:    1 DPARTKEPELALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKYLEAKERAGEPIVADCVRGAAEYVTKMFKVFGLASPGPALGFSQGGDANGTDAGGVGG-EASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDKAVWKLEDPAVLARERQQREQEQLRRLEAKEETKRKAAEKEARKKIPASEYFRGLK 221
            DPARTKEPEL LMSS+SDAKK+VKKCLCDDFDTPGAMGALQE+VK VNKY+EAKERAGEPIVADCVRGAAEYVTK+FKVFGLASPGPALGFSQGGDA G         EASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGD+AVWKLEDPAVLARERQQREQEQLRRLEAK ETKRKAAEKEARKKIPASEYFRGLK
Sbjct:  390 DPARTKEPELTLMSSLSDAKKEVKKCLCDDFDTPGAMGALQELVKKVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGGXXXXXXXXXEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFRGLK 611          
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: A0A835Z463_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z463_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.010e-50
Identity = 112/223 (50.22%), Postives = 142/223 (63.68%), Query Frame = 0
Query:    1 DPARTKEPELALMSSVSDAKKDVKKCLCDDFDTPGAMGAL-QEVVKNVNKYLEAKERAGEPIVADCVRGAAEYVTKMFKVFGLASPGPALGFSQGGDANGTDAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDKAVWKLEDPAVLARERQQREQEQLRRLEAKEETKR----KAAEKEARKKIPASEYFR 218
            D  R  E E+AL   + + K  V+  LCDDFDTP A+  L  ++V+ VNKY++ K  AG       VR A EYVT++FKVFGL + G  +GF           GG+    SRE  +GPVLD LS FR +VR C RAGD+ GV++ACD VR++ LP +GVRLEDKGD+ VWKLEDPAVLA E+ ++E +  +R   KEE KR    KAAEK A+ KIP  E FR
Sbjct:  383 DELRLGEGEIALYRKLEECKSGVRAALCDDFDTPTAIKLLASDLVRTVNKYIQEKTDAGLKSHYIVVRTAGEYVTRIFKVFGLVTSGVDMGFDV------EQEGGI----SREEAMGPVLDALSTFRTQVRTCARAGDSAGVISACDQVRDDALPPLGVRLEDKGDQVVWKLEDPAVLAAEKAKKEADAQQRQLEKEEKKRQAAIKAAEKAAKDKIPPCEMFR 595          
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: A0A7S3L6K9_9STRA (Cysteine--tRNA ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6K9_9STRA)

HSP 1 Score: 149 bits (377), Expect = 2.920e-38
Identity = 95/211 (45.02%), Postives = 125/211 (59.24%), Query Frame = 0
Query:   10 LALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKYLEAKERAGEPIVADCVRGAAEYVTKMFKVFGLASPGPALGFSQGGDANGTDAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDKAVWKLEDPAVLARERQQREQEQLRRLEAKEETKRKAAEKEARKKIPASEYFRGL 220
            + L  +++D +  V   L DDFDTP AM  L ++VK  N YLE +      +V   VR  A Y+TKMFKVFGL  P  ++GF       G + G  GGE  +E IL PVLDVL  FR  VR   RAGDT+ +L  CD  R+ELLP +GVRLEDKG+ +VWKL++PA L RE +Q+  EQ R+             KEA K++P +E+ + L
Sbjct:  393 VTLQQTLTDVQAKVGAALRDDFDTPTAMTKLGDLVKATNVYLETETTQ---VVGLVVRSVASYITKMFKVFGLI-PNDSIGF-------GLEDGSSGGEG-KEEILSPVLDVLMAFRSSVREQARAGDTQAILKLCDKFRDELLPPLGVRLEDKGEVSVWKLDNPADLVREMEQKRFEQERKAXXXXXXXXXXXXKEALKRLPPTEFLKQL 591          
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: A0A7S1XX51_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX51_9STRA)

HSP 1 Score: 145 bits (367), Expect = 3.310e-38
Identity = 86/185 (46.49%), Postives = 116/185 (62.70%), Query Frame = 0
Query:    6 KEPELALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKYLEAKERAGEPIVADCVRGAAEYVTKMFKVFGLASPGPALGFSQGGDANGTDAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKG-DKAVWKLEDPAVLARERQQREQEQL 189
            ++ E+A  S++   K+ V   LCDDFDTP  +  L  +V+  N Y +  E A  P V   ++ +A Y+TKMF+VFGL      +GF       G++AG  GG ASRE  LGP+LDVL+ FR+KVR   R+GD+  VL+ACD +R+  L  +GVRLED G   A WKL+DP  L RE +QREQE+L
Sbjct:  137 RQKEIAFESALLAIKQQVHDALCDDFDTPTVLQILLRLVRITNVYSKVFEPA--PPVPLIIKESARYITKMFRVFGLVEGDADMGF-------GSEAGAAGGGASREETLGPLLDVLTAFREKVRAAARSGDSAEVLSACDALRDVDLVELGVRLEDAGAGGARWKLDDPEALKRELEQREQERL 312          
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: A0A7S0C423_9STRA (Cysteine--tRNA ligase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C423_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.190e-35
Identity = 97/216 (44.91%), Postives = 126/216 (58.33%), Query Frame = 0
Query:    9 ELALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKYLEAKERAG-EPIVADCVRGAAEYVTKMFKVFGLA--SPGPALGFSQGGDANGTDAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDKAVWKLEDPAVLARERQQREQEQLRRLEAKEETKRKAAE----KEARKKIPASEYF 217
            E AL ++ +   K V K   DDFDTPG + AL +++K++NKYLEA E +    ++A  VR A  +VTK+ KV GL   + G  +GF      +GTD      + +RE  L P+LDVL  FR  VR   RA D KGVL ACD  R++ LP +G+RLEDK   +VWKLED A L  ER+Q   ++L+    KEE KRKA E    KE   KI   EY 
Sbjct:  329 EFALDAATTACMKKVDKAFRDDFDTPGVLTALSDLIKDMNKYLEAVEISDTHKVIALVVRRAGLFVTKILKVLGLIPDNSGVEMGFP----FDGTD------DVNREEALAPILDVLMSFRSTVRDAARAKDMKGVLTACDEFRDDDLPPLGIRLEDKTGTSVWKLEDAAKLVLEREQAIAQKLQ----KEEEKRKAVEIAKLKEEAAKISPIEYM 530          
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: A0A812UK10_SYMMI (Cysteine--tRNA ligase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UK10_SYMMI)

HSP 1 Score: 140 bits (353), Expect = 5.640e-35
Identity = 84/223 (37.67%), Postives = 135/223 (60.54%), Query Frame = 0
Query:    2 PARTKEPELALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKYLEAKERAGEPIVADCVRGAAEYVTKMFKVFGLASPGPALGFSQGGDANGTDAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDK----AVWKLEDPAVLARERQQREQEQLRRLEAKEETKRKAAEKEARKKIPASEYFRGL 220
            P    + ++ALM      K++V+  LCDDFDTP A+G L+++++ VNKY+E+    G  +++   R    Y+T + + FGL      +GFS   +++G ++ G     ++E +L P LD L++FR+ VR     GDT  VLAA D +R+++LP +GVR+EDKG      +VWKL+DPA L  ER+Q+E  +  + E + E +RK  E+E + K+P  + FR +
Sbjct:  372 PQHVGQRDVALMQFQEATKENVRAALCDDFDTPTAVGHLKDLIREVNKYIESGV-VGSAVLSSTAR----YITSVLRTFGLVQDDNDIGFSL--ESSGGESAG-----NKEELLAPYLDALTKFRETVRIAAINGDTAAVLAAADCLRDDVLPPLGVRMEDKGSGVDVVSVWKLDDPATLRLEREQKEAVKRAKEEQRAEARRKQLEREEKAKVPPQDMFRSM 582          
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: A0A196SMU0_BLAHN (Cysteine--tRNA ligase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SMU0_BLAHN)

HSP 1 Score: 134 bits (338), Expect = 6.720e-33
Identity = 72/183 (39.34%), Postives = 105/183 (57.38%), Query Frame = 0
Query:    2 PARTKEPELALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKYLEAKERAGEPIVADCVRGAAEYVTKMFKVFGLASPGPALGFSQGGDANGTDAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDKAVWKLEDPAVLARERQQR 184
            P R  E E+A+ +++   ++DV KCLCDDFDT GAM AL+ +V+   +Y+E        +VA  V   A YVT MFKVFGL  P  ++GF Q            GG    E +L PV+++LSEFR +V+      +   +L  CD +R+++LP  G+RLED     +WKL+D   L  ER+++
Sbjct:  374 PERWDEKEVAMNAALMKCREDVHKCLCDDFDTEGAMAALEALVRAYYQYVEGASH----VVAPLVTSVAAYVTSMFKVFGLIDPEVSIGFGQ-----------TGGSVDEETVLTPVVNILSEFRTRVKLA--RNNPAELLRLCDELRDDILPFAGIRLEDTAKGTIWKLQDKETLIAEREEK 539          
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: D8M9S2_BLAHO (Cysteine--tRNA ligase n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M9S2_BLAHO)

HSP 1 Score: 134 bits (337), Expect = 7.490e-33
Identity = 73/183 (39.89%), Postives = 108/183 (59.02%), Query Frame = 0
Query:    2 PARTKEPELALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKYLEAKERAGEPIVADCVRGAAEYVTKMFKVFGLASPGPALGFSQGGDANGTDAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDKAVWKLEDPAVLARERQQR 184
            P R  + E+ L + +  A+  V  CLCDDFDT GAM AL+ +V+ V +YLE  +    P+V  C    A +V++MF+VFGL  P P +GF+ G +A           A REA+L PV+++LS+FR  V+      D   +L  CD +R+++LP VG+RLED  +  +WKLE    L  ER+++
Sbjct:  340 PQRWDDAEVQLNAQLDAARTSVHTCLCDDFDTAGAMEALEGLVRAVYRYLETAKHIVAPLVLSC----AGFVSQMFRVFGLIEPEPKIGFAAGEEA-----------ADREAVLSPVVEILSKFRTVVKK--NRADPAALLKLCDEIRDDILPFVGIRLEDTANGTIWKLEAKETLIAEREKK 505          
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: A0A6U0T1A9_9STRA (Cysteine--tRNA ligase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0T1A9_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.800e-31
Identity = 81/185 (43.78%), Postives = 106/185 (57.30%), Query Frame = 0
Query:    4 RTKEPELALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKYLEAKERAGEPIVADCVRGAAEYVTKMFKVFGLA--SPGPALGFSQGGDANGTDAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDK-GDKAVWKLEDPAVLARERQQRE 185
            R  E    L +++SD K  V   L DDFDTP ++ AL ++VK  N YL++        V   +R AA Y+T +F++FGL   S G  +GF           GG G  A  E  L PVLD L +FR  VR   R  DT GVL+ CD  R+++LP +G+RLEDK G K+VWKL DP  L +ER+QRE
Sbjct:  392 RWDESARQLQNTLSDIKSRVDAALRDDFDTPASINALSDLVKATNLYLDSCVARQITPVNLLLRNAAVYITHIFRIFGLIPDSAGGEIGFP---------IGGAGDAADLEEALTPVLDSLMQFRASVRDFARVKDTGGVLSECDKFRDDVLPVLGIRLEDKTGGKSVWKLADPNELMKEREQRE 567          
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: A0A485LI47_9STRA (Cysteine--tRNA ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LI47_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.250e-30
Identity = 91/220 (41.36%), Postives = 123/220 (55.91%), Query Frame = 0
Query:    9 ELALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKYLEAKERAGEPIVADCVRGAAEYVTKMFKVFGLASPGPALGFSQGGDANGTDAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDT-----KGVLAACDHVREELLPGVGVRLEDK-GDKAVWKLEDPAVLARERQQREQEQLRRLEAKE----ETKRKAAEKEARKKIPASEYFR 218
            E AL  SV DAK+ V + L DD DTP A+  LQE+ K+VN+YL A +      V+  VR AAEY+T M +VFGL      +GF   G A G          ++E  L PVLD+ ++FRD+VR      D      K ++  CD VR+  LP  GVRLED+ G K+VWKL D   L +E +Q+E E+  +  AK+    E  RK AE+  R +I  S+ F+
Sbjct:  423 EKALGKSVLDAKEKVHQALADDLDTPRALRLLQELAKDVNRYLAASDAP----VSMAVRAAAEYITHMLRVFGLVPHATDIGFPLDGAAGG----------NQEETLAPVLDIFTDFRDEVRAILFNNDPNVDVKKALMTLCDSVRDTKLPHAGVRLEDRTGGKSVWKLADKDELLKEIRQKEDEKAAKEVAKQQRLAEEARKLAEERERAQIHPSDLFK 628          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK68_9PHAE2.530e-12791.44Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835Z463_9STRA1.010e-5050.22Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S3L6K9_9STRA2.920e-3845.02Cysteine--tRNA ligase n=1 Tax=Amphora coffeiformis... [more]
A0A7S1XX51_9STRA3.310e-3846.49Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S0C423_9STRA1.190e-3544.91Cysteine--tRNA ligase n=1 Tax=Proboscia inermis Ta... [more]
A0A812UK10_SYMMI5.640e-3537.67Cysteine--tRNA ligase n=1 Tax=Symbiodinium microad... [more]
A0A196SMU0_BLAHN6.720e-3339.34Cysteine--tRNA ligase n=1 Tax=Blastocystis sp. sub... [more]
D8M9S2_BLAHO7.490e-3339.89Cysteine--tRNA ligase n=1 Tax=Blastocystis hominis... [more]
A0A6U0T1A9_9STRA1.800e-3143.78Cysteine--tRNA ligase n=1 Tax=Eucampia antarctica ... [more]
A0A485LI47_9STRA1.250e-3041.36Cysteine--tRNA ligase n=1 Tax=Aphanomyces stellatu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 175..209
NoneNo IPR availableGENE3D1.20.120.640coord: 3..115
e-value: 8.5E-9
score: 37.7
NoneNo IPR availablePANTHERPTHR10890:SF3CYSTEINE--TRNA LIGASE, CYTOPLASMICcoord: 4..218
IPR015273Cysteinyl-tRNA synthetase, class Ia, DALRSMARTSM00840dalr_2_4coord: 22..89
e-value: 0.004
score: 24.7
IPR015273Cysteinyl-tRNA synthetase, class Ia, DALRPFAMPF09190DALR_2coord: 24..82
e-value: 5.1E-6
score: 26.9
IPR024909Cysteinyl-tRNA synthetase/mycothiol ligasePANTHERPTHR10890CYSTEINYL-TRNA SYNTHETASEcoord: 4..218
IPR009080Aminoacyl-tRNA synthetase, class Ia, anticodon-bindingSUPERFAMILY47323Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasescoord: 9..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13832contigE-fasciculatus_F_contig13832:4..2867 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13832.2824.1mRNA_E-fasciculatus_F_contig13832.2824.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13832 4..2867 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13832.2824.1 ID=prot_E-fasciculatus_F_contig13832.2824.1|Name=mRNA_E-fasciculatus_F_contig13832.2824.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=221bp
DPARTKEPELALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKY
LEAKERAGEPIVADCVRGAAEYVTKMFKVFGLASPGPALGFSQGGDANGT
DAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVRE
ELLPGVGVRLEDKGDKAVWKLEDPAVLARERQQREQEQLRRLEAKEETKR
KAAEKEARKKIPASEYFRGLK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009080tRNAsynth_Ia_anticodon-bd
IPR024909Cys-tRNA/MSH_ligase
IPR015273Cys-tRNA-synt_Ia_DALR