mRNA_E-fasciculatus_F_contig13832.2824.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13832.2824.1
Unique NamemRNA_E-fasciculatus_F_contig13832.2824.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: A0A6H5JK68_9PHAE (Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK68_9PHAE)

HSP 1 Score: 384 bits (986), Expect = 2.530e-127
Identity = 203/222 (91.44%), Postives = 209/222 (94.14%), Query Frame = 1
Query:    1 DPARTKEPELALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKYLEAKERAGEPIVADCVRGAAEYVTKMFKVFGLASPGPALGFSQGGDANGTDAGGVGG-EASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDKAVWKLEDPAVLARERQQREQEQLRRLEAKEETKRKAAEKEARKKIPASEYFRGLK 663
            DPARTKEPEL LMSS+SDAKK+VKKCLCDDFDTPGAMGALQE+VK VNKY+EAKERAGEPIVADCVRGAAEYVTK+FKVFGLASPGPALGFSQGGDA G         EASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGD+AVWKLEDPAVLARERQQREQEQLRRLEAK ETKRKAAEKEARKKIPASEYFRGLK
Sbjct:  390 DPARTKEPELTLMSSLSDAKKEVKKCLCDDFDTPGAMGALQELVKKVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGGXXXXXXXXXEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFRGLK 611          
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: A0A835Z463_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z463_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.010e-50
Identity = 112/223 (50.22%), Postives = 142/223 (63.68%), Query Frame = 1
Query:    1 DPARTKEPELALMSSVSDAKKDVKKCLCDDFDTPGAMGAL-QEVVKNVNKYLEAKERAGEPIVADCVRGAAEYVTKMFKVFGLASPGPALGFSQGGDANGTDAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDKAVWKLEDPAVLARERQQREQEQLRRLEAKEETKR----KAAEKEARKKIPASEYFR 654
            D  R  E E+AL   + + K  V+  LCDDFDTP A+  L  ++V+ VNKY++ K  AG       VR A EYVT++FKVFGL + G  +GF           GG+    SRE  +GPVLD LS FR +VR C RAGD+ GV++ACD VR++ LP +GVRLEDKGD+ VWKLEDPAVLA E+ ++E +  +R   KEE KR    KAAEK A+ KIP  E FR
Sbjct:  383 DELRLGEGEIALYRKLEECKSGVRAALCDDFDTPTAIKLLASDLVRTVNKYIQEKTDAGLKSHYIVVRTAGEYVTRIFKVFGLVTSGVDMGFDV------EQEGGI----SREEAMGPVLDALSTFRTQVRTCARAGDSAGVISACDQVRDDALPPLGVRLEDKGDQVVWKLEDPAVLAAEKAKKEADAQQRQLEKEEKKRQAAIKAAEKAAKDKIPPCEMFR 595          
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: A0A7S3L6K9_9STRA (Cysteine--tRNA ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6K9_9STRA)

HSP 1 Score: 149 bits (377), Expect = 2.920e-38
Identity = 95/211 (45.02%), Postives = 125/211 (59.24%), Query Frame = 1
Query:   28 LALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKYLEAKERAGEPIVADCVRGAAEYVTKMFKVFGLASPGPALGFSQGGDANGTDAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDKAVWKLEDPAVLARERQQREQEQLRRLEAKEETKRKAAEKEARKKIPASEYFRGL 660
            + L  +++D +  V   L DDFDTP AM  L ++VK  N YLE +      +V   VR  A Y+TKMFKVFGL  P  ++GF       G + G  GGE  +E IL PVLDVL  FR  VR   RAGDT+ +L  CD  R+ELLP +GVRLEDKG+ +VWKL++PA L RE +Q+  EQ R+             KEA K++P +E+ + L
Sbjct:  393 VTLQQTLTDVQAKVGAALRDDFDTPTAMTKLGDLVKATNVYLETETTQ---VVGLVVRSVASYITKMFKVFGLI-PNDSIGF-------GLEDGSSGGEG-KEEILSPVLDVLMAFRSSVREQARAGDTQAILKLCDKFRDELLPPLGVRLEDKGEVSVWKLDNPADLVREMEQKRFEQERKAXXXXXXXXXXXXKEALKRLPPTEFLKQL 591          
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: A0A7S1XX51_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX51_9STRA)

HSP 1 Score: 145 bits (367), Expect = 3.310e-38
Identity = 86/185 (46.49%), Postives = 116/185 (62.70%), Query Frame = 1
Query:   16 KEPELALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKYLEAKERAGEPIVADCVRGAAEYVTKMFKVFGLASPGPALGFSQGGDANGTDAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKG-DKAVWKLEDPAVLARERQQREQEQL 567
            ++ E+A  S++   K+ V   LCDDFDTP  +  L  +V+  N Y +  E A  P V   ++ +A Y+TKMF+VFGL      +GF       G++AG  GG ASRE  LGP+LDVL+ FR+KVR   R+GD+  VL+ACD +R+  L  +GVRLED G   A WKL+DP  L RE +QREQE+L
Sbjct:  137 RQKEIAFESALLAIKQQVHDALCDDFDTPTVLQILLRLVRITNVYSKVFEPA--PPVPLIIKESARYITKMFRVFGLVEGDADMGF-------GSEAGAAGGGASREETLGPLLDVLTAFREKVRAAARSGDSAEVLSACDALRDVDLVELGVRLEDAGAGGARWKLDDPEALKRELEQREQERL 312          
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: A0A7S0C423_9STRA (Cysteine--tRNA ligase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C423_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.190e-35
Identity = 97/216 (44.91%), Postives = 126/216 (58.33%), Query Frame = 1
Query:   25 ELALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKYLEAKERAG-EPIVADCVRGAAEYVTKMFKVFGLA--SPGPALGFSQGGDANGTDAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDKAVWKLEDPAVLARERQQREQEQLRRLEAKEETKRKAAE----KEARKKIPASEYF 651
            E AL ++ +   K V K   DDFDTPG + AL +++K++NKYLEA E +    ++A  VR A  +VTK+ KV GL   + G  +GF      +GTD      + +RE  L P+LDVL  FR  VR   RA D KGVL ACD  R++ LP +G+RLEDK   +VWKLED A L  ER+Q   ++L+    KEE KRKA E    KE   KI   EY 
Sbjct:  329 EFALDAATTACMKKVDKAFRDDFDTPGVLTALSDLIKDMNKYLEAVEISDTHKVIALVVRRAGLFVTKILKVLGLIPDNSGVEMGFP----FDGTD------DVNREEALAPILDVLMSFRSTVRDAARAKDMKGVLTACDEFRDDDLPPLGIRLEDKTGTSVWKLEDAAKLVLEREQAIAQKLQ----KEEEKRKAVEIAKLKEEAAKISPIEYM 530          
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: A0A812UK10_SYMMI (Cysteine--tRNA ligase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UK10_SYMMI)

HSP 1 Score: 140 bits (353), Expect = 5.640e-35
Identity = 84/223 (37.67%), Postives = 135/223 (60.54%), Query Frame = 1
Query:    4 PARTKEPELALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKYLEAKERAGEPIVADCVRGAAEYVTKMFKVFGLASPGPALGFSQGGDANGTDAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDK----AVWKLEDPAVLARERQQREQEQLRRLEAKEETKRKAAEKEARKKIPASEYFRGL 660
            P    + ++ALM      K++V+  LCDDFDTP A+G L+++++ VNKY+E+    G  +++   R    Y+T + + FGL      +GFS   +++G ++ G     ++E +L P LD L++FR+ VR     GDT  VLAA D +R+++LP +GVR+EDKG      +VWKL+DPA L  ER+Q+E  +  + E + E +RK  E+E + K+P  + FR +
Sbjct:  372 PQHVGQRDVALMQFQEATKENVRAALCDDFDTPTAVGHLKDLIREVNKYIESGV-VGSAVLSSTAR----YITSVLRTFGLVQDDNDIGFSL--ESSGGESAG-----NKEELLAPYLDALTKFRETVRIAAINGDTAAVLAAADCLRDDVLPPLGVRMEDKGSGVDVVSVWKLDDPATLRLEREQKEAVKRAKEEQRAEARRKQLEREEKAKVPPQDMFRSM 582          
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: A0A196SMU0_BLAHN (Cysteine--tRNA ligase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SMU0_BLAHN)

HSP 1 Score: 134 bits (338), Expect = 6.720e-33
Identity = 72/183 (39.34%), Postives = 105/183 (57.38%), Query Frame = 1
Query:    4 PARTKEPELALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKYLEAKERAGEPIVADCVRGAAEYVTKMFKVFGLASPGPALGFSQGGDANGTDAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDKAVWKLEDPAVLARERQQR 552
            P R  E E+A+ +++   ++DV KCLCDDFDT GAM AL+ +V+   +Y+E        +VA  V   A YVT MFKVFGL  P  ++GF Q            GG    E +L PV+++LSEFR +V+      +   +L  CD +R+++LP  G+RLED     +WKL+D   L  ER+++
Sbjct:  374 PERWDEKEVAMNAALMKCREDVHKCLCDDFDTEGAMAALEALVRAYYQYVEGASH----VVAPLVTSVAAYVTSMFKVFGLIDPEVSIGFGQ-----------TGGSVDEETVLTPVVNILSEFRTRVKLA--RNNPAELLRLCDELRDDILPFAGIRLEDTAKGTIWKLQDKETLIAEREEK 539          
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: D8M9S2_BLAHO (Cysteine--tRNA ligase n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M9S2_BLAHO)

HSP 1 Score: 134 bits (337), Expect = 7.490e-33
Identity = 73/183 (39.89%), Postives = 108/183 (59.02%), Query Frame = 1
Query:    4 PARTKEPELALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKYLEAKERAGEPIVADCVRGAAEYVTKMFKVFGLASPGPALGFSQGGDANGTDAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDKAVWKLEDPAVLARERQQR 552
            P R  + E+ L + +  A+  V  CLCDDFDT GAM AL+ +V+ V +YLE  +    P+V  C    A +V++MF+VFGL  P P +GF+ G +A           A REA+L PV+++LS+FR  V+      D   +L  CD +R+++LP VG+RLED  +  +WKLE    L  ER+++
Sbjct:  340 PQRWDDAEVQLNAQLDAARTSVHTCLCDDFDTAGAMEALEGLVRAVYRYLETAKHIVAPLVLSC----AGFVSQMFRVFGLIEPEPKIGFAAGEEA-----------ADREAVLSPVVEILSKFRTVVKK--NRADPAALLKLCDEIRDDILPFVGIRLEDTANGTIWKLEAKETLIAEREKK 505          
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: A0A6U0T1A9_9STRA (Cysteine--tRNA ligase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0T1A9_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.800e-31
Identity = 81/185 (43.78%), Postives = 106/185 (57.30%), Query Frame = 1
Query:   10 RTKEPELALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKYLEAKERAGEPIVADCVRGAAEYVTKMFKVFGLA--SPGPALGFSQGGDANGTDAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDK-GDKAVWKLEDPAVLARERQQRE 555
            R  E    L +++SD K  V   L DDFDTP ++ AL ++VK  N YL++        V   +R AA Y+T +F++FGL   S G  +GF           GG G  A  E  L PVLD L +FR  VR   R  DT GVL+ CD  R+++LP +G+RLEDK G K+VWKL DP  L +ER+QRE
Sbjct:  392 RWDESARQLQNTLSDIKSRVDAALRDDFDTPASINALSDLVKATNLYLDSCVARQITPVNLLLRNAAVYITHIFRIFGLIPDSAGGEIGFP---------IGGAGDAADLEEALTPVLDSLMQFRASVRDFARVKDTGGVLSECDKFRDDVLPVLGIRLEDKTGGKSVWKLADPNELMKEREQRE 567          
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Match: A0A485LI47_9STRA (Cysteine--tRNA ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LI47_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.250e-30
Identity = 91/220 (41.36%), Postives = 123/220 (55.91%), Query Frame = 1
Query:   25 ELALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKYLEAKERAGEPIVADCVRGAAEYVTKMFKVFGLASPGPALGFSQGGDANGTDAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDT-----KGVLAACDHVREELLPGVGVRLEDK-GDKAVWKLEDPAVLARERQQREQEQLRRLEAKE----ETKRKAAEKEARKKIPASEYFR 654
            E AL  SV DAK+ V + L DD DTP A+  LQE+ K+VN+YL A +      V+  VR AAEY+T M +VFGL      +GF   G A G          ++E  L PVLD+ ++FRD+VR      D      K ++  CD VR+  LP  GVRLED+ G K+VWKL D   L +E +Q+E E+  +  AK+    E  RK AE+  R +I  S+ F+
Sbjct:  423 EKALGKSVLDAKEKVHQALADDLDTPRALRLLQELAKDVNRYLAASDAP----VSMAVRAAAEYITHMLRVFGLVPHATDIGFPLDGAAGG----------NQEETLAPVLDIFTDFRDEVRAILFNNDPNVDVKKALMTLCDSVRDTKLPHAGVRLEDRTGGKSVWKLADKDELLKEIRQKEDEKAAKEVAKQQRLAEEARKLAEERERAQIHPSDLFK 628          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13832.2824.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK68_9PHAE2.530e-12791.44Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835Z463_9STRA1.010e-5050.22Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S3L6K9_9STRA2.920e-3845.02Cysteine--tRNA ligase n=1 Tax=Amphora coffeiformis... [more]
A0A7S1XX51_9STRA3.310e-3846.49Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S0C423_9STRA1.190e-3544.91Cysteine--tRNA ligase n=1 Tax=Proboscia inermis Ta... [more]
A0A812UK10_SYMMI5.640e-3537.67Cysteine--tRNA ligase n=1 Tax=Symbiodinium microad... [more]
A0A196SMU0_BLAHN6.720e-3339.34Cysteine--tRNA ligase n=1 Tax=Blastocystis sp. sub... [more]
D8M9S2_BLAHO7.490e-3339.89Cysteine--tRNA ligase n=1 Tax=Blastocystis hominis... [more]
A0A6U0T1A9_9STRA1.800e-3143.78Cysteine--tRNA ligase n=1 Tax=Eucampia antarctica ... [more]
A0A485LI47_9STRA1.250e-3041.36Cysteine--tRNA ligase n=1 Tax=Aphanomyces stellatu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13832contigE-fasciculatus_F_contig13832:4..2867 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score126.3
Seed ortholog evalue1.7e-26
Seed eggNOG ortholog2850.Phatr26346
KEGG rclassRC00055,RC00523
KEGG koko:K01883
KEGG ReactionR03650
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
GOsGO:0000049,GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.DALR_2
EggNOG OGs2XFI6@2836,COG0215@1,KOG2007@2759
EC6.1.1.16
COG Functional cat.J
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCysteinyl-tRNA Synthetase
Ec32 orthologEc-02_002270.1
Exons5
Model size663
Cds size663
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13832.2824.1prot_E-fasciculatus_F_contig13832.2824.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13832 4..2867 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927877.327835-CDS-E-fasciculatus_F_contig13832:3..1501622927877.327835-CDS-E-fasciculatus_F_contig13832:3..150Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13832 4..150 +
1695995734.0714135-CDS-E-fasciculatus_F_contig13832:3..1501695995734.0714135-CDS-E-fasciculatus_F_contig13832:3..150Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13832 4..150 +
1622927877.3409033-CDS-E-fasciculatus_F_contig13832:395..4821622927877.3409033-CDS-E-fasciculatus_F_contig13832:395..482Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13832 396..482 +
1695995734.0819721-CDS-E-fasciculatus_F_contig13832:395..4821695995734.0819721-CDS-E-fasciculatus_F_contig13832:395..482Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13832 396..482 +
1622927877.358516-CDS-E-fasciculatus_F_contig13832:1035..12991622927877.358516-CDS-E-fasciculatus_F_contig13832:1035..1299Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13832 1036..1299 +
1695995734.0901577-CDS-E-fasciculatus_F_contig13832:1035..12991695995734.0901577-CDS-E-fasciculatus_F_contig13832:1035..1299Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13832 1036..1299 +
1622927877.372213-CDS-E-fasciculatus_F_contig13832:2044..21101622927877.372213-CDS-E-fasciculatus_F_contig13832:2044..2110Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13832 2045..2110 +
1695995734.1008067-CDS-E-fasciculatus_F_contig13832:2044..21101695995734.1008067-CDS-E-fasciculatus_F_contig13832:2044..2110Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13832 2045..2110 +
1622927877.3861895-CDS-E-fasciculatus_F_contig13832:2768..28671622927877.3861895-CDS-E-fasciculatus_F_contig13832:2768..2867Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13832 2769..2867 +
1695995734.1102297-CDS-E-fasciculatus_F_contig13832:2768..28671695995734.1102297-CDS-E-fasciculatus_F_contig13832:2768..2867Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13832 2769..2867 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13832.2824.1

>prot_E-fasciculatus_F_contig13832.2824.1 ID=prot_E-fasciculatus_F_contig13832.2824.1|Name=mRNA_E-fasciculatus_F_contig13832.2824.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=221bp
DPARTKEPELALMSSVSDAKKDVKKCLCDDFDTPGAMGALQEVVKNVNKY
LEAKERAGEPIVADCVRGAAEYVTKMFKVFGLASPGPALGFSQGGDANGT
DAGGVGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVRE
ELLPGVGVRLEDKGDKAVWKLEDPAVLARERQQREQEQLRRLEAKEETKR
KAAEKEARKKIPASEYFRGLK
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mRNA from alignment at E-fasciculatus_F_contig13832:4..2867+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13832.2824.1 ID=mRNA_E-fasciculatus_F_contig13832.2824.1|Name=mRNA_E-fasciculatus_F_contig13832.2824.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2864bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13832:4..2867+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GACCCCGCCCGCACGAAAGAGCCGGAACTCGCGCTCATGTCGAGCGTGTC GGACGCCAAGAAGGACGTGAAGAAGTGCCTGTGCGATGACTTCGACACGC CGGGGGCCATGGGAGCGCTGCAGGAGGTCGTGAAGAACGTCAACAAGGTG GAGGGAGAAGCGTGGGCGTTGTTGTAGGTGTGGGTCGTTAAAGAGTTGCG GGAAGGGCAGTGAAGGTCTTGTTGATGTTGTTGTACATTGTAGGTGCGGA CCGTTGGGTGTAGCGGGAAGAGGGGCGTTGGAGGTCTTTTCTCAACTGGG CTGTCTTTGGAACGTACCCTCCCTCGAACGGATTCGTCTGATCCCCCGTC TACCTGTCTGTTTGTGGCCCTTAACCTTGGCTGCTGTTGCAGTACCTCGA GGCGAAGGAGAGGGCGGGAGAGCCGATCGTCGCGGACTGTGTCCGAGGGG CTGCCGAGTACGTCACCAAGATGTTCAAGGTTAGCTCCTCAGGCTCAGGC ATCGAAGAGTCTTGCGAGAAACCTTTGTAGGCGCTTGTCTCCCAGATGTA TCTCCGTCTCTTGCCGTCCAACTCTTGCCCCCCCCCGGTTGGTAGAACCC TTTGATTGAAAACGGTGTTTGCGTGTTGATCCCGCTTGAAAGACTGACGT CTTTCCATTGGTCAGCCGGTTAGCACCGTCGATGCTAATTCAAATACACA CACGCACTCACAACACACGCACACACACAGCAGCCGAGCGTTGAAAACCG GTCCAGGGGGTGTGGTTCTTGATCTTGGTCTTGGGTCATGTCATGTCACC TACGGTACAACACATACTCATGCAACTCCGTGGCAGATATATGCATGAAG GACGATACAAGATTGGCTTTTGTACTACGGCGACTCCTCCCGCGTTGCCT GTGGCCACATTGCCCCCCCCCCCCCCCCCCACCGGTGTACAGGCGGAGCC CCTCCAGGAGCAAATGCCTACCCTCCTCTTGATTTTTGCACCGCGCCGGC GCCCCCCCCCCCTCTCGTGCAAAATTTCACAGGTGTTCGGGTTGGCCTCT CCCGGCCCGGCGCTAGGCTTCTCCCAGGGGGGAGACGCGAACGGCACGGA CGCCGGCGGGGTGGGTGGGGAGGCCTCTCGGGAAGCGATCCTGGGACCGG TTCTAGACGTCCTCTCGGAGTTCCGGGACAAGGTGAGGGGCTGCGGTCGC GCGGGCGACACAAAGGGGGTGCTGGCGGCCTGCGACCACGTTAGAGAAGA GCTGCTGCCTGGCGTCGGGGTGCGACTCGAGGACAAGGGGGACAAGGTGC GTGCCGTGCGTTTCGGGCTGACGCGTGCGTCGTCGATATGGCGTGGTCCG CGCTTGTGCTAGGCTCTTTTCTGTTGTATCCATCTTGTTGTATGTGTGTG TGTTTTGCTGCCGTTGCTGGTGGTGCTTGTTTGTTTGGTCTTGTCGTCGT CCGTGTTGCCGTTGCCGTGTTGTGGTGGTTGGTGGTGTGGTGGCCTTTCC TTTGGGCGGTTGTGGTCGCGTGTCTTGTGCGACAACGCCCGGGACGAGTT GCTCTTCCACCGTGGAGATGGTTGGCGCTGGGGGTGGAGAAGGCGGTGGT TCGGACGCGACGAATGGCAGATACTTGTAAAGCGTACGCTGTGGCGCTGT GAAGTTCGCTTCCCTCCGCTCCTTGACCGCAACTGAATCAACACACAGCA GTACGGTGGTAGGTCTTTTGGTGTATCCCGGTCTTGTGTGAGTTGCGTTG TTCTTTCGGCTGTATATCGCTGGTGCTCTCGAATCACACGAAAGCCGCCG GCCTCTGGACGCTCTCTCTGTCTTGTGTCCAGCCATTTAGATTTTGTGTG TTTCGGTTTGTTTTTTGTGTATTTGTCTCTAGCTTCGGTCCTGTTTCGGA ACGTTGCGGCAGATACATTGTTTTGGCGCGCAGGGCCGTGCCTTCTTCCT TCAGTGCAGTTGTTTATGGCTTTTCCTGCGCCTTTAACATATTCCCGTCC CATTTTACATCACCGCGACTGCTGCCGGCACTGTATTGCAGGCGGTGTGG AAGCTCGAGGACCCGGCCGTCCTGGCAAGAGAGCGACAGCAGAGGGAACA AGAACAGGTGCGCACGAACGACGAAATTGTCCCAAATTCATGTCTTGTCG TGTCTGCCCCTTTGTGCCTGTCGCGGACCTAAGCCGTCGCTTGGTTGTAT GCCTACGAATGGGACCGAGTTGCGTATGGTGCAATGCACGTTGCATTTTT TGTTGTTGTTATTTTCTTTGTTTTGCACAAAAATGCGGCATCAGGTCTGG TCTGACTCGCGCTGTGCCAGCCGTTGCCACGCGTAGGCAAGAGACAAGAG GGCAATATCGTACAATATTTCTGTGCCGCCCCTCCACAGTACATAGCCCG CGACTTCATGCCGTAGAGTTTTCGACGTTACGTGCGGACTGTTGGCGATG TCGACGGTTTCCCTTTTTTTTTTTTTTTTTTTGCTTGGAGTGCTTCAGCC TTGCCGGCAGTGCATTGCGGTCGAGGCCACGTCTTTAAAAGGCATTCACT CTGCGGTGTGCCGAGTCAGTCGAGGCACGAGCGGGGGACTTGTGCAGCTG TTCGAAAACCTCCTCGAGCTTGTGTACTAAGCCAAGCATAGCTCTTGTAG ATTTGTGCTTCAGAGCCAACGACGATCGTCCGGCTGTTGGCGCGCGGTAT GTTGCCTCTCATTCGCTCCTCTCGTCGTCTTTTGTGGATCAATGGTATGA CCGAAACGGCATCAGCTGCGCCGCTTGGAGGCGAAGGAAGAGACTAAGAG GAAGGCGGCAGAGAAGGAGGCAAGGAAAAAGATTCCCGCCAGCGAATACT TCCGGGGATTGAAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13832:4..2867+

>mRNA_E-fasciculatus_F_contig13832.2824.1 ID=mRNA_E-fasciculatus_F_contig13832.2824.1|Name=mRNA_E-fasciculatus_F_contig13832.2824.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1326bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13832:4..2867+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GACCCCGCCCGCACGAAAGAGCCGGAACTCGCGCTCATGTCGAGCGTGTC
GGACGCCAAGAAGGACGTGAAGAAGTGCCTGTGCGATGACTTCGACACGC
CGGGGGCCATGGGAGCGCTGCAGGAGGTCGTGAAGAACGTCAACAAGGAC
CCCGCCCGCACGAAAGAGCCGGAACTCGCGCTCATGTCGAGCGTGTCGGA
CGCCAAGAAGGACGTGAAGAAGTGCCTGTGCGATGACTTCGACACGCCGG
GGGCCATGGGAGCGCTGCAGGAGGTCGTGAAGAACGTCAACAAGTACCTC
GAGGCGAAGGAGAGGGCGGGAGAGCCGATCGTCGCGGACTGTGTCCGAGG
GGCTGCCGAGTACGTCACCAAGATGTTCAAGTACCTCGAGGCGAAGGAGA
GGGCGGGAGAGCCGATCGTCGCGGACTGTGTCCGAGGGGCTGCCGAGTAC
GTCACCAAGATGTTCAAGGTGTTCGGGTTGGCCTCTCCCGGCCCGGCGCT
AGGCTTCTCCCAGGGGGGAGACGCGAACGGCACGGACGCCGGCGGGGTGG
GTGGGGAGGCCTCTCGGGAAGCGATCCTGGGACCGGTTCTAGACGTCCTC
TCGGAGTTCCGGGACAAGGTGAGGGGCTGCGGTCGCGCGGGCGACACAAA
GGGGGTGCTGGCGGCCTGCGACCACGTTAGAGAAGAGCTGCTGCCTGGCG
TCGGGGTGCGACTCGAGGACAAGGGGGACAAGGTGTTCGGGTTGGCCTCT
CCCGGCCCGGCGCTAGGCTTCTCCCAGGGGGGAGACGCGAACGGCACGGA
CGCCGGCGGGGTGGGTGGGGAGGCCTCTCGGGAAGCGATCCTGGGACCGG
TTCTAGACGTCCTCTCGGAGTTCCGGGACAAGGTGAGGGGCTGCGGTCGC
GCGGGCGACACAAAGGGGGTGCTGGCGGCCTGCGACCACGTTAGAGAAGA
GCTGCTGCCTGGCGTCGGGGTGCGACTCGAGGACAAGGGGGACAAGGCGG
TGTGGAAGCTCGAGGACCCGGCCGTCCTGGCAAGAGAGCGACAGCAGAGG
GAACAAGAACAGGCGGTGTGGAAGCTCGAGGACCCGGCCGTCCTGGCAAG
AGAGCGACAGCAGAGGGAACAAGAACAGCTGCGCCGCTTGGAGGCGAAGG
AAGAGACTAAGAGGAAGGCGGCAGAGAAGGAGGCAAGGAAAAAGATTCCC
GCCAGCGAATACTTCCGGGGATTGAAGCTGCGCCGCTTGGAGGCGAAGGA
AGAGACTAAGAGGAAGGCGGCAGAGAAGGAGGCAAGGAAAAAGATTCCCG
CCAGCGAATACTTCCGGGGATTGAAG
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