prot_E-fasciculatus_F_contig13385.2534.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13385.2534.1
Unique Nameprot_E-fasciculatus_F_contig13385.2534.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length75
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13385.2534.1 vs. uniprot
Match: A0A6H5KJE7_9PHAE (DENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJE7_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 3.670e-30
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 0 
Query:    1 RGGSDRSGGPGSSXXXXXXGTDGFRGGARSPGLPSPNTLLLRSLSSSSAISRVSSHFSHFNSNATPVELQLPATF 75
            RGGSDRSGGPGSSXXXXXX TDGFRGGARSPGLPSPNTLLLRSLSSSSAISRVSSHFSHFNSN TPVELQLPATF
Sbjct:  574 RGGSDRSGGPGSSXXXXXXXTDGFRGGARSPGLPSPNTLLLRSLSSSSAISRVSSHFSHFNSNVTPVELQLPATF 648
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13385.2534.1 vs. uniprot
Match: D7FYV2_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV2_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 3.670e-30
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 0 
Query:    1 RGGSDRSGGPGSSXXXXXXGTDGFRGGARSPGLPSPNTLLLRSLSSSSAISRVSSHFSHFNSNATPVELQLPATF 75
            RGGSDRSGGPGSSXXXXXX TDGFRGGARSPGLPSPNTLLLRSLSSSSAISRVSSHFSHFNSN TPVELQLPATF
Sbjct:  946 RGGSDRSGGPGSSXXXXXXXTDGFRGGARSPGLPSPNTLLLRSLSSSSAISRVSSHFSHFNSNVTPVELQLPATF 1020
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13385.2534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJE7_9PHAE3.670e-3097.33DENN domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FYV2_ECTSI3.670e-3097.33PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13385contigE-fasciculatus_F_contig13385:638..862 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13385.2534.1mRNA_E-fasciculatus_F_contig13385.2534.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13385 638..862 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13385.2534.1 ID=prot_E-fasciculatus_F_contig13385.2534.1|Name=mRNA_E-fasciculatus_F_contig13385.2534.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=75bp
RGGSDRSGGPGSSGGHGRGGTDGFRGGARSPGLPSPNTLLLRSLSSSSAI
SRVSSHFSHFNSNATPVELQLPATF
back to top