prot_E-fasciculatus_F_contig13316.2489.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13316.2489.1
Unique Nameprot_E-fasciculatus_F_contig13316.2489.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length168
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13316.2489.1 vs. uniprot
Match: D8LJM7_ECTSI (C3H1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJM7_ECTSI)

HSP 1 Score: 306 bits (783), Expect = 7.310e-101
Identity = 153/168 (91.07%), Postives = 159/168 (94.64%), Query Frame = 0 
Query:    1 MWSTTDGSTWTQVTSVQMTEWRHVGALQEVEGALYVGYGTPYAHLADVTVDALRVMDLTSGSTQEVVSAVTGFAHSARINRVMVVKVGAESRVYSGDEEGRIAAWARPSPGAPFAQLAQLEGHARAITSLVSTASNGMLWSSSEDGTIRIWNTGTNACEHTITSEREG 168
            MWSTTDGSTWTQVTSVQMTEWRHVG LQEVEG LYVGYGTPYAHLADVTVDALRVMDLTSGSTQEVVS+VTGFAH++RINR+MV KVGAE RVY+GDEEGRI AWARPSPGAPFAQLAQLEGHARAITSLVSTASNGMLWSSSEDGTIRIWNTGTNAC HTIT +  G
Sbjct:  132 MWSTTDGSTWTQVTSVQMTEWRHVGDLQEVEGVLYVGYGTPYAHLADVTVDALRVMDLTSGSTQEVVSSVTGFAHASRINRIMVAKVGAEPRVYTGDEEGRITAWARPSPGAPFAQLAQLEGHARAITSLVSTASNGMLWSSSEDGTIRIWNTGTNACVHTITKDNGG 299
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BLAST of mRNA_E-fasciculatus_F_contig13316.2489.1 vs. uniprot
Match: A0A7S0CBB5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CBB5_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.970e-8
Identity = 41/110 (37.27%), Postives = 56/110 (50.91%), Query Frame = 0 
Query:   73 FAHSARINRVMVVKVGAESRVYSGDEEGRIAAW---------------ARPSPGAPFAQLAQLEGHARAITSLVSTASNGMLWSSSEDGTIRIWNTGTNACEHTITSERE 167
            +AH+  ++ ++V K   +  V SG ++G I  W               A  SP + F  L  L GHAR IT LV   +  M+WSSS D TIR+W+  T  C+H ITS  E
Sbjct:    1 YAHAMGVSSLLVTK---DMVVVSGSKDGTIRIWKFTTTNPAVATPGAVAPASPASEFLLLNTLFGHAREITGLV-LINMSMIWSSSTDYTIRLWDANTGQCQHLITSAEE 106
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BLAST of mRNA_E-fasciculatus_F_contig13316.2489.1 vs. uniprot
Match: A0A6U5LIP5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5LIP5_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 3.040e-7
Identity = 49/151 (32.45%), Postives = 70/151 (46.36%), Query Frame = 0 
Query:   24 VGALQEVEGALYVGYGTPYAHLADVTVDALRVMDLTSGST--QEVV---SAVTGFAHSARINRVMVVKVGAES-RVYSGDEEGRIAAWARPSPGAPFAQLAQLEGHARAITSLVSTASNGMLWSSSEDGTIRIWNTGTNACEHTITSEREG 168
            VGAL      L+ G+      L  V V ++   +L + ++  QE     SAV  +AH   +  ++ V  GA    V S  E+G I  W   +    F     L GHARA++ L    S G+LWS SED +IR+W+    +C   I    EG
Sbjct:  163 VGALVVSNNLLFCGFEKECPLLPGVKVGSIHAWNLQNAASPPQEFHAEDSAVHPYAHGRIVTSLLPVPDGAGGVAVVSSSEDGLIRVWRFDTGTGKFMVFRSLMGHARAVSGLAY--SEGLLWSGSEDHSIRMWDMSKGSCGKVIAGGSEG 311
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BLAST of mRNA_E-fasciculatus_F_contig13316.2489.1 vs. uniprot
Match: A0A7R9WQC1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WQC1_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 5.420e-5
Identity = 34/96 (35.42%), Postives = 52/96 (54.17%), Query Frame = 0 
Query:   73 FAHSARINRVMVVKVGAESRVYSGDEEGRIAAW---ARPSPG-APFAQLAQLEGHARAITSLVSTASNGMLWSSSEDGTIRIWNTGTNACEHTITS 164
            ++H+ R++ + V+      +V SG  +G I  W   A  + G   F     L GHAR +T L    +  +LWSSS DG+IRIW+  +  C+H IT+
Sbjct:   20 YSHATRVSALNVI---GGQKVISGSRDGCIRLWTFEASSNQGKGGFVLSKTLAGHAREVTGLA--VAENVLWSSSIDGSIRIWDLASGNCQHAITN 110
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13316.2489.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJM7_ECTSI7.310e-10191.07C3H1-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S0CBB5_9STRA1.970e-837.27Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A6U5LIP5_9STRA3.040e-732.45Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7R9WQC1_9STRA5.420e-535.42Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 63..106
e-value: 69.0
score: 5.4
coord: 113..152
e-value: 1.2E-5
score: 34.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 120..161
score: 13.516
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..168
e-value: 4.4E-15
score: 57.3
NoneNo IPR availablePANTHERPTHR44489FAMILY NOT NAMEDcoord: 55..166
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 139..153
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 120..161
score: 12.526
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 33..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13316contigE-fasciculatus_F_contig13316:226..2989 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13316.2489.1mRNA_E-fasciculatus_F_contig13316.2489.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13316 226..2989 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13316.2489.1 ID=prot_E-fasciculatus_F_contig13316.2489.1|Name=mRNA_E-fasciculatus_F_contig13316.2489.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=168bp
MWSTTDGSTWTQVTSVQMTEWRHVGALQEVEGALYVGYGTPYAHLADVTV
DALRVMDLTSGSTQEVVSAVTGFAHSARINRVMVVKVGAESRVYSGDEEG
RIAAWARPSPGAPFAQLAQLEGHARAITSLVSTASNGMLWSSSEDGTIRI
WNTGTNACEHTITSEREG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011047Quinoprotein_ADH-like_supfam
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat