prot_E-fasciculatus_F_contig13147.2380.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13147.2380.1
Unique Nameprot_E-fasciculatus_F_contig13147.2380.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length50
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13147.2380.1 vs. uniprot
Match: D8LR42_ECTSI (Ribosomal protein L3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR42_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 1.040e-20
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0 
Query:    4 RGAAFPSDPPFPSFVATAEGDGDESSLQEIWCPQGEEDPLEIVYED 49
            +GAAFPSDPPFPSFVA AEGDGD+SSLQEIWCPQGEEDPLEIV ED
Sbjct:  324 KGAAFPSDPPFPSFVAVAEGDGDDSSLQEIWCPQGEEDPLEIVDED 369
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13147.2380.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LR42_ECTSI1.040e-2091.30Ribosomal protein L3 n=2 Tax=Ectocarpus TaxID=2879... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13147contigE-fasciculatus_F_contig13147:266..415 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13147.2380.1mRNA_E-fasciculatus_F_contig13147.2380.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13147 266..415 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13147.2380.1 ID=prot_E-fasciculatus_F_contig13147.2380.1|Name=mRNA_E-fasciculatus_F_contig13147.2380.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=50bp
DDRRGAAFPSDPPFPSFVATAEGDGDESSLQEIWCPQGEEDPLEIVYED*
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