prot_E-fasciculatus_F_contig13098.2343.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13098.2343.1
Unique Nameprot_E-fasciculatus_F_contig13098.2343.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length335
Homology
BLAST of mRNA_E-fasciculatus_F_contig13098.2343.1 vs. uniprot
Match: D7FS10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS10_ECTSI)

HSP 1 Score: 555 bits (1431), Expect = 4.190e-195
Identity = 310/334 (92.81%), Postives = 322/334 (96.41%), Query Frame = 0
Query:    1 VRSELEDEFRVSFREGAMGMTLSMDPDSRDAVVGKIVEQGQAFRAGVQTDDLVIGVGEHTVSSYGTVLAFMNIMGRPIELHFRKSERGXXXXXXXXXXXXPISAXXXXXXXXXXXXTAAVPEGYRATKSGGLSKSGPIRGNLEGARGDSLSRKLKGAAGAKSLGVIAPRSPISPRSQGKVSGFSGLGREVASSDAGFSEKMEHGVVVTKYGKKGAAAQRLLYLDGVSMSVAWRDLDARSPGHSRSTSLTNIIKGKREALALAHLIEVIAGDDPDPTRPSEKGSAMLREHCDESLLERSFALQFKERSLEMTCDSHAEMRQLVAGFRDLQKQCGR 334
            VRSELEDEFRVSFREGAMGMTLSMDPD+RDA+VGKIVEQGQAFRAG+QTDDLVIGVGE+TVSSYGTVLAFMNIMGRPIELHFRKS++G    XXXXXXXX ISAX XXXXXXXXXX+AA PEG+RATK+GG+SKSGPIRGNLEG RGDSLSRKLKGAAG KS G IAPRSPISPRSQGKVSGFSGLGREVASSDAGFSEKMEHGVVVTKYGKKGAAAQRLLYLDGVSMSVAWRDLDARSPGHSRS+SLTNIIKGKREALALAHL+EVIAGDDPDPTRPSEKGSAMLREHCDESLLERSFALQFKERSLEMTCDSHAEMRQLVAGFRDLQKQ GR
Sbjct:  191 VRSELEDEFRVSFREGAMGMTLSMDPDTRDAIVGKIVEQGQAFRAGIQTDDLVIGVGENTVSSYGTVLAFMNIMGRPIELHFRKSDKGSGDGXXXXXXXX-ISAXHXXXXXXXXXXSAAKPEGFRATKAGGVSKSGPIRGNLEGTRGDSLSRKLKGAAGVKSAGGIAPRSPISPRSQGKVSGFSGLGREVASSDAGFSEKMEHGVVVTKYGKKGAAAQRLLYLDGVSMSVAWRDLDARSPGHSRSSSLTNIIKGKREALALAHLLEVIAGDDPDPTRPSEKGSAMLREHCDESLLERSFALQFKERSLEMTCDSHAEMRQLVAGFRDLQKQYGR 523          
BLAST of mRNA_E-fasciculatus_F_contig13098.2343.1 vs. uniprot
Match: A0A835YTV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTV8_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.460e-9
Identity = 42/105 (40.00%), Postives = 58/105 (55.24%), Query Frame = 0
Query:    1 VRSELEDEFRVSFREGAMGMTLSMDPDSRDAVVGKIVEQGQAFRAGVQTDDLVIGVGEHTVSS-----------------YGTVLAFMNIMGRPIELHFRKSERG 88
            +R  L  EF V F EG++GM+L +   +  A V K+VE+GQA   GV+  D+V  VG+   +S                 YGT LAF+NI+GRP+ L F+K E G
Sbjct: 1216 LRRALPKEFSVEFNEGSIGMSL-VRTAADTAEVSKVVERGQAHTGGVKAGDVVSAVGDSVATSMNXXXXXXXXXXXXXXXYGTTLAFLNILGRPVTLWFQKGEDG 1319          
BLAST of mRNA_E-fasciculatus_F_contig13098.2343.1 vs. uniprot
Match: A0A6U1C867_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1C867_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 8.360e-6
Identity = 43/141 (30.50%), Postives = 67/141 (47.52%), Query Frame = 0
Query:  195 AGFSEKMEHGVVVTKYGKKGAAAQRLLYLDGVSMSVAWRDLDARSPGHSR---STSLTNIIKGKREALALAHLIEVIAGDDPDPTRPSEKGSAMLREHCDESLLERSF-------ALQFKERSLEMTCDSHAEMRQLVAGF 325
            A F EK+E+GV V K+ ++G AA RLL L     S+ W  +   +    R     S+      K ++  L  L EV  G+ PDP  P + G+  LR H  +    R         +L F +R++++  +S A+ + L  GF
Sbjct:  167 AEFKEKLENGVQVVKFNRRGQAAFRLLVLKEDGRSLTW-SVPRGTQADGRLGFGQSVRRKFSAKSDSFDLRSLSEVRLGEAPDPAFPGKFGTETLRMHASKYAQIRQMQEHGLCVSLIFPDRTVDLGSNSQAQRQFLTRGF 306          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13098.2343.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FS10_ECTSI4.190e-19592.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YTV8_9STRA1.460e-940.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U1C867_9STRA8.360e-630.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 15..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13098contigE-fasciculatus_F_contig13098:216..3735 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13098.2343.1mRNA_E-fasciculatus_F_contig13098.2343.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13098 216..3735 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13098.2343.1 ID=prot_E-fasciculatus_F_contig13098.2343.1|Name=mRNA_E-fasciculatus_F_contig13098.2343.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=335bp
VRSELEDEFRVSFREGAMGMTLSMDPDSRDAVVGKIVEQGQAFRAGVQTD
DLVIGVGEHTVSSYGTVLAFMNIMGRPIELHFRKSERGGGGGGGGGSGGG
PISASHSGARGGGGGGTAAVPEGYRATKSGGLSKSGPIRGNLEGARGDSL
SRKLKGAAGAKSLGVIAPRSPISPRSQGKVSGFSGLGREVASSDAGFSEK
MEHGVVVTKYGKKGAAAQRLLYLDGVSMSVAWRDLDARSPGHSRSTSLTN
IIKGKREALALAHLIEVIAGDDPDPTRPSEKGSAMLREHCDESLLERSFA
LQFKERSLEMTCDSHAEMRQLVAGFRDLQKQCGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf