prot_E-fasciculatus_F_contig13094.2341.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig13094.2341.1
Unique Name	prot_E-fasciculatus_F_contig13094.2341.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	222

Homology

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BLAST of mRNA_E-fasciculatus_F_contig13094.2341.1 vs. uniprot
Match: D7FXZ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ3_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 4.380e-26
Identity = 61/154 (39.61%), Postives = 89/154 (57.79%), Query Frame = 0

Query:   71 DSSKTRFKKELVPLIEAFINGVEEVSEEWRGKQLPNTTEEGVHDAMISIFLKNKRFKGLVEDMAKQCDKE---GKGAIMENFRSLWAGLSADKVVATTEGWQFRRALLGAISAPSKTTFDDVKAFVGGTLSRKAYKQATARRNDTEADQNLHDL 221
            D+S++R KK L   +  F+N +++    W  +   N     V DA +   L NK     +ED+A    K    G  AI +N R+LW  LS+ + VA++EGWQFRR LLGA+  P+ TT+ +V  FVGG+LS +A+ +A  RR+ T+    LHDL
Sbjct:   65 DASRSRMKKVLDHNVSVFVNSLQDACAAWTERLNKNFEPVAVEDATVDALLANKDLTAFMEDLASSSRKHKERGNEAIRDNIRALWKRLSSSETVASSEGWQFRRVLLGALCGPN-TTYKEVHEFVGGSLSHRAFNEAQIRRDATDTTSILHDL 217

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig13094.2341.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig13094.2341.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FXZ3_ECTSI	4.380e-26	39.61	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..38
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 39..221

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig13094	contig	E-fasciculatus_F_contig13094:2218..2883 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig13094.2341.1	mRNA_E-fasciculatus_F_contig13094.2341.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig13094 19..3726 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig13094.2341.1 ID=prot_E-fasciculatus_F_contig13094.2341.1|Name=mRNA_E-fasciculatus_F_contig13094.2341.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=222bp
MLVSPRWEHTILFHLALPGRNVFVAVQTVAAVSTLKLVRLRLRLFYFFPS
FTPEQPSGKKPRVDDGGAMSDSSKTRFKKELVPLIEAFINGVEEVSEEWR
GKQLPNTTEEGVHDAMISIFLKNKRFKGLVEDMAKQCDKEGKGAIMENFR
SLWAGLSADKVVATTEGWQFRRALLGAISAPSKTTFDDVKAFVGGTLSRK
AYKQATARRNDTEADQNLHDL*