prot_E-fasciculatus_F_contig13091.2340.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13091.2340.1
Unique Nameprot_E-fasciculatus_F_contig13091.2340.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length37
Homology
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Match: A0A6H5KUL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUL4_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 6.970e-16
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
Query:    1 MEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE 37
            MEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE
Sbjct:  430 MEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE 466          
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Match: D8LMP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP8_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 6.990e-16
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
Query:    1 MEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE 37
            MEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE
Sbjct:  180 MEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE 216          
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Match: A0A7S2ALK4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ALK4_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 7.320e-7
Identity = 21/36 (58.33%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    2 EEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE 37
            +EMR  GV P+V +F  AI+ACGKAGQWE+A+++L+
Sbjct:    1 DEMRDNGVNPNVVSFNAAISACGKAGQWEKAIEVLQ 36          
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Match: A0A7S1NU60_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NU60_9EUGL)

HSP 1 Score: 48.1 bits (113), Expect = 8.720e-6
Identity = 19/36 (52.78%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    1 MEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLL 36
            ME+M+A+G+     T++TAI+ACG  GQW+RAL L+
Sbjct:    1 MEDMQAQGIHASTITYSTAISACGTGGQWQRALQLM 36          
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Match: A0A7S1IVU8_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IVU8_9EUGL)

HSP 1 Score: 49.3 bits (116), Expect = 8.730e-6
Identity = 21/36 (58.33%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    1 MEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLL 36
            M+EMRA+G+  +  T++ AI+ C KAGQWERAL LL
Sbjct:    3 MDEMRAKGITANTITYSAAISVCEKAGQWERALKLL 38          
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Match: A0A7S2AII3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AII3_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 1.760e-5
Identity = 20/29 (68.97%), Postives = 25/29 (86.21%), Query Frame = 0
Query:    8 GVAPDVFTFTTAITACGKAGQWERALDLL 36
            G+ PD FTF++AI+AC K GQWE+ALDLL
Sbjct:    1 GIIPDSFTFSSAISACEKGGQWEQALDLL 29          
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Match: A0A7S1Z0K5_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z0K5_TRICV)

HSP 1 Score: 48.1 bits (113), Expect = 2.720e-5
Identity = 18/34 (52.94%), Postives = 27/34 (79.41%), Query Frame = 0
Query:    4 MRAEGVAPDVFTFTTAITACGKAGQWERALDLLE 37
            M+ EG+APD +T+T A++ACG  G+W  +LDL+E
Sbjct:  272 MKDEGIAPDAYTYTGAMSACGSEGRWRESLDLME 305          
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Match: A0A7S2A2A2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A2A2_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 3.730e-5
Identity = 17/37 (45.95%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    1 MEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE 37
            +E+M+ +GV PD ++++ AI+ACG  G+WE AL+L++
Sbjct:  109 LEQMKKDGVVPDAYSYSAAISACGAEGRWEEALNLIK 145          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KUL4_9PHAE6.970e-16100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMP8_ECTSI6.990e-16100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2ALK4_9STRA7.320e-758.33Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S1NU60_9EUGL8.720e-652.78Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A7S1IVU8_9EUGL8.730e-658.33Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A7S2AII3_9STRA1.760e-568.97Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S1Z0K5_TRICV2.720e-552.94Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S2A2A2_9STRA3.730e-545.95Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 14..37
e-value: 1.7E-5
score: 22.7
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 8..37
e-value: 3.0E-7
score: 30.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 12..37
score: 9.164
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..37
e-value: 1.0E-10
score: 43.2
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..23
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13091contigE-fasciculatus_F_contig13091:2..112 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13091.2340.1mRNA_E-fasciculatus_F_contig13091.2340.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13091 2..139 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13091.2340.1 ID=prot_E-fasciculatus_F_contig13091.2340.1|Name=mRNA_E-fasciculatus_F_contig13091.2340.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=37bp
MEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat