mRNA_E-fasciculatus_F_contig13091.2340.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Match: D8LMP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP8_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 6.250e-22 Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1
Query: 1 QGWALVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE 138
+GWALVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE
Sbjct: 171 EGWALVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE 216
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Match: A0A6H5KUL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUL4_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 1.160e-21 Identity = 44/46 (95.65%), Postives = 46/46 (100.00%), Query Frame = 1
Query: 1 QGWALVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE 138
+GWA+VLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE
Sbjct: 421 EGWAIVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE 466
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Match: A0A7S2A2A2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A2A2_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 5.080e-7 Identity = 20/44 (45.45%), Postives = 33/44 (75.00%), Query Frame = 1
Query: 7 WALVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE 138
W L L+E+M+ +GV PD ++++ AI+ACG G+WE AL+L++
Sbjct: 102 WKHALDLLEQMKKDGVVPDAYSYSAAISACGAEGRWEEALNLIK 145
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Match: A0A7S2ALK4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ALK4_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 7.720e-7 Identity = 21/36 (58.33%), Postives = 30/36 (83.33%), Query Frame = 1
Query: 31 EEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE 138
+EMR GV P+V +F AI+ACGKAGQWE+A+++L+
Sbjct: 1 DEMRDNGVNPNVVSFNAAISACGKAGQWEKAIEVLQ 36
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Match: A0A1Z5J9M9_FISSO (Smr domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9M9_FISSO) HSP 1 Score: 52.4 bits (124), Expect = 1.310e-6 Identity = 21/46 (45.65%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 1 QGWALVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE 138
Q W L L+ M+ +G+ PD+ T+++AI+AC AGQW+RAL +L+
Sbjct: 585 QWWECALSLLRRMKEDGLKPDMPTYSSAISACEAAGQWQRALSILQ 630
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Match: A0A7S4IIT4_9STRA (Hypothetical protein n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IIT4_9STRA) HSP 1 Score: 52.4 bits (124), Expect = 1.310e-6 Identity = 21/45 (46.67%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 1 QGWALVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLL 135
Q W L L+ M+ EG+ PDV T+++AI++C AGQW+RA+ +L
Sbjct: 776 QWWECSLSLLRRMKEEGIVPDVQTYSSAISSCEAAGQWQRAIGIL 820
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Match: B5Y463_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y463_PHATC) HSP 1 Score: 51.2 bits (121), Expect = 3.340e-6 Identity = 22/44 (50.00%), Postives = 30/44 (68.18%), Query Frame = 1
Query: 7 WALVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE 138
W L L+ M+ EG PD TF++AI+AC AGQW+RAL +L+
Sbjct: 179 WECALSLLRRMQEEGQQPDTQTFSSAISACESAGQWQRALRVLQ 222
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Match: A0A7S0C4H7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C4H7_9STRA) HSP 1 Score: 51.2 bits (121), Expect = 3.340e-6 Identity = 19/46 (41.30%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 1 QGWALVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE 138
Q W L ++E M+A+G+ PD F+++ I+ACG AG+W A++L++
Sbjct: 205 QLWYKALRILEMMKADGIKPDAFSYSNVISACGFAGRWREAMELIQ 250
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Match: A0A7S1Z0K5_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z0K5_TRICV) HSP 1 Score: 50.8 bits (120), Expect = 4.570e-6 Identity = 20/40 (50.00%), Postives = 30/40 (75.00%), Query Frame = 1
Query: 19 LGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLE 138
L L+ M+ EG+APD +T+T A++ACG G+W +LDL+E
Sbjct: 266 LDLLRIMKDEGIAPDAYTYTGAMSACGSEGRWRESLDLME 305
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Match: A0A7S1NU60_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NU60_9EUGL) HSP 1 Score: 48.5 bits (114), Expect = 9.170e-6 Identity = 19/36 (52.78%), Postives = 28/36 (77.78%), Query Frame = 1
Query: 28 MEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLL 135
ME+M+A+G+ T++TAI+ACG GQW+RAL L+
Sbjct: 1 MEDMQAQGIHASTITYSTAISACGTGGQWQRALQLM 36 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13091.2340.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13091.2340.1 >prot_E-fasciculatus_F_contig13091.2340.1 ID=prot_E-fasciculatus_F_contig13091.2340.1|Name=mRNA_E-fasciculatus_F_contig13091.2340.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=37bp MEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLEback to top mRNA from alignment at E-fasciculatus_F_contig13091:2..139- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13091.2340.1 ID=mRNA_E-fasciculatus_F_contig13091.2340.1|Name=mRNA_E-fasciculatus_F_contig13091.2340.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=138bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13091:2..139- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13091:2..139- >mRNA_E-fasciculatus_F_contig13091.2340.1 ID=mRNA_E-fasciculatus_F_contig13091.2340.1|Name=mRNA_E-fasciculatus_F_contig13091.2340.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=222bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13091:2..139- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |