prot_E-fasciculatus_F_contig1309.2338.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1309.2338.1
Unique Nameprot_E-fasciculatus_F_contig1309.2338.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length259
Homology
BLAST of mRNA_E-fasciculatus_F_contig1309.2338.1 vs. uniprot
Match: D7FVT6_ECTSI (S1-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVT6_ECTSI)

HSP 1 Score: 335 bits (858), Expect = 2.260e-113
Identity = 199/238 (83.61%), Postives = 203/238 (85.29%), Query Frame = 0
Query:    1 MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLANGEPSLALLPTRFRKLIWVKRGDYLITSTSAGDFETSAGETGKVRHRVEHILNKDQIKHLKKQELWPADDAFGGARLAAGAGSSCPRDGWGDAVAGXXXXXXXXXXKGMGAAAIEGKXXXXXXXXXXXXTAEKDVGSGVKVGVDGAAGEITSGALRSEGXXXXXXXXXXXXXXXXSDLFVNNNRAAMMQL 238
            MAGVGRRTLYRKSVTDDYLNSTPEPGENEEI LAQAPRGSNIIEIMLANGEPSLALLPTRFRKLIWVKRGDYLITSTSAGDFETSAGETGKVRHRVEHILNKDQIKHLKK+ELWPADDAFGGA LAAGAGSS PRDGWGDAVA           KGMGAAAIE K  XXX       TAEK+VGSGVKVG DGA GE+ SG       XXXXXXXXXXXXXX SDLFVNNNRAAMM+L
Sbjct:    1 MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIVLAQAPRGSNIIEIMLANGEPSLALLPTRFRKLIWVKRGDYLITSTSAGDFETSAGETGKVRHRVEHILNKDQIKHLKKRELWPADDAFGGALLAAGAGSSGPRDGWGDAVADGGGSSDSGGSKGMGAAAIEEKGNXXXEVAATAATAEKEVGSGVKVGGDGA-GEVPSGXXXXX--XXXXXXXXXXXXXXMSDLFVNNNRAAMMRL 235          
BLAST of mRNA_E-fasciculatus_F_contig1309.2338.1 vs. uniprot
Match: A0A835YV91_9STRA (S1-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV91_9STRA)

HSP 1 Score: 147 bits (371), Expect = 2.340e-39
Identity = 78/163 (47.85%), Postives = 92/163 (56.44%), Query Frame = 0
Query:    1 MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLANGEPSLALLPTRFRKLIWVKRGDYLITSTSAGDFETSA-----------------------------------------------GETGKVRHRVEHILNKDQIKHLKKQELWPA 116
            MAGVGRRT YRKSV ++YL+  PEPGE   +A A   RGSN+IE+ L  GE SLA+LPTRFRKLIWVKRGDY++ STS GD ET                                                 GE GKVRHRVEH+L+KDQ+KH++K   WPA
Sbjct:    1 MAGVGRRTNYRKSVQEEYLSGLPEPGEGTAVAKALGSRGSNVIEVELQCGEQSLAMLPTRFRKLIWVKRGDYVLVSTSTGDIETHTAAAAAHARYAVQCNAPAYRPAQRGAHASKPALRRRRSYRAVRTSALDGEEGKVRHRVEHVLSKDQVKHIRKIGKWPA 163          
BLAST of mRNA_E-fasciculatus_F_contig1309.2338.1 vs. uniprot
Match: A0A7S1GDQ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDQ2_9STRA)

HSP 1 Score: 132 bits (332), Expect = 2.130e-35
Identity = 66/131 (50.38%), Postives = 84/131 (64.12%), Query Frame = 0
Query:    1 MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLANGEPSLALLPTRFRKLIWVKRGDYLITSTSAGDFETSAGETGKVRHRVEHILNKDQIKHLKKQELWPA---DDAFGGARLAAG 128
            MAGV RR+ YRK+V    L+   EP E + I    A RGSN+++++   GE  L +LPTR+RKL+WVKRGD+LI   +  DFET+ G+ G VR  V H+L KDQ+KHLKK   WPA   DD   GA  A G
Sbjct:    1 MAGVKRRSKYRKNVEASVLDEMHEPEEGQIIVRVVASRGSNLLDVVTEAGEGGLCMLPTRYRKLVWVKRGDHLIVDCADDDFETAGGDKGAVRFSVAHVLYKDQVKHLKKIGKWPAAFDDDGAAGAGAAGG 131          
BLAST of mRNA_E-fasciculatus_F_contig1309.2338.1 vs. uniprot
Match: A0A4D9CWY1_9STRA (S1-like domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWY1_9STRA)

HSP 1 Score: 135 bits (339), Expect = 3.880e-35
Identity = 68/126 (53.97%), Postives = 91/126 (72.22%), Query Frame = 0
Query:    1 MAGVGRRTLYRKSVTDDYLNSTPEPG--ENEEIALAQAPRGSNIIEIMLA----NGEP----SLALLPTRFRKLIWVKRGDYLITSTSAGDFETSAGETGKVRHRVEHILNKDQIKHLKKQELWPA 116
            M+G GR++ YRKSVT++ L+S PEP     E +A     RG NI+++ +A    +GE     SLALLPT+FRKLIWVKRGD++I S ++ DF+T+AGE GKV+  VEHIL K+Q+KHLK Q +WPA
Sbjct:    1 MSGAGRKSAYRKSVTEEVLHSFPEPNVAAGERVARVVQSRGGNILQVNVAPDPKSGEDENGGSLALLPTKFRKLIWVKRGDFVIVSGTSHDFQTAAGEKGKVKFMVEHILYKEQVKHLKDQGMWPA 126          
BLAST of mRNA_E-fasciculatus_F_contig1309.2338.1 vs. uniprot
Match: A0A7S2UVE6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVE6_9STRA)

HSP 1 Score: 134 bits (336), Expect = 7.290e-35
Identity = 64/120 (53.33%), Postives = 82/120 (68.33%), Query Frame = 0
Query:    2 AGVGRRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLANGEPSLALLPTRFRKLIWVKRGDYLITSTSAGDFETSAGETGKVRHRVEHILN-KDQIKHLKKQELWPADDAF 120
            AG GRRTLYRKSV + YLN TP P E E I      RGSNI+++   +G  +LA+LPT+FRKLIWVKRGD+LI S S GD  T++G +GKV+  V H+L+ +DQ  HL+    WP + A 
Sbjct:    1 AGSGRRTLYRKSVMESYLNDTPVPEEGERIVKVVESRGSNILQVQCPDGTKALAMLPTKFRKLIWVKRGDFLIVSESQGDVSTASGGSGKVKFMVSHVLHSRDQRAHLQSTGHWPGEFAL 120          
BLAST of mRNA_E-fasciculatus_F_contig1309.2338.1 vs. uniprot
Match: A0A812LGH3_9DINO (Eif1ad protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812LGH3_9DINO)

HSP 1 Score: 129 bits (323), Expect = 2.480e-33
Identity = 61/116 (52.59%), Postives = 79/116 (68.10%), Query Frame = 0
Query:    1 MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLANGEPSLALLPTRFRKLIWVKRGDYLITSTSAGDFETSAGETGKVRHRVEHILNKDQIKHLKKQELWPA 116
            MAGV RRT YRK V  D L++   P + +EI       GSNI+E+  A GE +  +LPT++RKLIWVKRGD+LI S  A D++T++G  G V++ VEHIL    IKHLKK+ LWPA
Sbjct:    1 MAGVKRRTKYRKQVEADVLDAFHTPEDGQEIVQIVQSHGSNILEVRDAEGENAKCILPTKYRKLIWVKRGDFLIVSKGAEDYDTASGNKGTVKYMVEHILTASSIKHLKKEGLWPA 116          
BLAST of mRNA_E-fasciculatus_F_contig1309.2338.1 vs. uniprot
Match: A0A080ZRU2_PHYPR (S1-like domain-containing protein n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A080ZRU2_PHYPR)

HSP 1 Score: 129 bits (323), Expect = 2.850e-33
Identity = 64/117 (54.70%), Postives = 81/117 (69.23%), Query Frame = 0
Query:    1 MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLANGEPSLALLPTRFRKLIWVKRGDYLITSTS-AGDFETSAGETGKVRHRVEHILNKDQIKHLKKQELWPA 116
            M+G GR++ YRK VT   L   PEP ENE I    A RGSN+ E++ ANG  S+ +LPT+FRKLIWVKRGD+LI      G+  T+ G+ G V   VEHIL K+QIK+LK++ELWPA
Sbjct:    1 MSGSGRKSAYRKGVTKRVLYGDPEPKENELIVRVTALRGSNLFEVVDANGVKSVTMLPTKFRKLIWVKRGDFLIVGEGDGGEATTATGKKGAVTSIVEHILYKEQIKNLKRKELWPA 117          
BLAST of mRNA_E-fasciculatus_F_contig1309.2338.1 vs. uniprot
Match: G4YPL5_PHYSP (S1-like domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YPL5_PHYSP)

HSP 1 Score: 128 bits (321), Expect = 5.070e-33
Identity = 63/117 (53.85%), Postives = 80/117 (68.38%), Query Frame = 0
Query:    1 MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLANGEPSLALLPTRFRKLIWVKRGDYLITSTS-AGDFETSAGETGKVRHRVEHILNKDQIKHLKKQELWPA 116
            M+G GR++ YRK VT   L   PEP ENE I    A RGSN+ E++ A G  S+ +LPT+FRKLIWVKRGD+LI      G+  T+ G+ G V   VEHIL KDQIK+LK+++LWPA
Sbjct:    1 MSGAGRKSAYRKGVTSRVLYGDPEPKENELIVRVTALRGSNLFEVVDAEGAKSVTMLPTKFRKLIWVKRGDFLIVGEGDGGEATTAKGKKGAVTSIVEHILYKDQIKNLKRKDLWPA 117          
BLAST of mRNA_E-fasciculatus_F_contig1309.2338.1 vs. uniprot
Match: A0A6A4G9K3_9STRA (S1-like domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4G9K3_9STRA)

HSP 1 Score: 128 bits (321), Expect = 5.360e-33
Identity = 63/117 (53.85%), Postives = 80/117 (68.38%), Query Frame = 0
Query:    1 MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLANGEPSLALLPTRFRKLIWVKRGDYLITSTS-AGDFETSAGETGKVRHRVEHILNKDQIKHLKKQELWPA 116
            M+G GR++ YRK VT   L   PEP ENE I    A RGSN+ E++ A G  ++ +LPT+FRKLIWVKRGD+LI      G+  T+ G+ G V   VEHIL KDQIK+LK++ELWPA
Sbjct:    1 MSGAGRKSAYRKGVTSRVLYGDPEPKENELIVRVTALRGSNLFEVVDAEGTKAVTMLPTKFRKLIWVKRGDFLIVGEGDGGEATTAKGKKGAVTSIVEHILYKDQIKNLKRKELWPA 117          
BLAST of mRNA_E-fasciculatus_F_contig1309.2338.1 vs. uniprot
Match: D0MXQ1_PHYIT (S1-like domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MXQ1_PHYIT)

HSP 1 Score: 128 bits (321), Expect = 5.670e-33
Identity = 64/117 (54.70%), Postives = 80/117 (68.38%), Query Frame = 0
Query:    1 MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLANGEPSLALLPTRFRKLIWVKRGDYLITSTS-AGDFETSAGETGKVRHRVEHILNKDQIKHLKKQELWPA 116
            M+G GR++ YRK VT   L   PEP ENE I    A RGSN+ E+  ANG  S+ +LPT+FRKLIWVKRGD+LI      G+  T+ G+ G V   VEHIL K+QIK+LK++ELWPA
Sbjct:    1 MSGSGRKSAYRKGVTKRVLYGDPEPKENELIVRVTALRGSNLFEVEDANGAKSVTMLPTKFRKLIWVKRGDFLIVGEGDGGETTTATGKKGAVTSIVEHILYKEQIKNLKRKELWPA 117          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1309.2338.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVT6_ECTSI2.260e-11383.61S1-like domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835YV91_9STRA2.340e-3947.85S1-like domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S1GDQ2_9STRA2.130e-3550.38Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A4D9CWY1_9STRA3.880e-3553.97S1-like domain-containing protein n=3 Tax=Monodops... [more]
A0A7S2UVE6_9STRA7.290e-3553.33Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A812LGH3_9DINO2.480e-3352.59Eif1ad protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
A0A080ZRU2_PHYPR2.850e-3354.70S1-like domain-containing protein n=1 Tax=Phytopht... [more]
G4YPL5_PHYSP5.070e-3353.85S1-like domain-containing protein n=1 Tax=Phytopht... [more]
A0A6A4G9K3_9STRA5.360e-3353.85S1-like domain-containing protein n=1 Tax=Phytopht... [more]
D0MXQ1_PHYIT5.670e-3354.70S1-like domain-containing protein n=2 Tax=Phytopht... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001253Translation initiation factor 1A (eIF-1A)SMARTSM00652eIF1neu4coord: 24..115
e-value: 3.3E-12
score: 56.6
IPR006196RNA-binding domain, S1, IF1 typePFAMPF01176eIF-1acoord: 29..89
e-value: 3.3E-10
score: 39.6
IPR006196RNA-binding domain, S1, IF1 typePROSITEPS50832S1_IF1_TYPEcoord: 5..97
score: 10.162
NoneNo IPR availableGENE3D2.40.50.140coord: 8..120
e-value: 3.7E-21
score: 76.5
IPR039294Probable RNA-binding protein EIF1ADPANTHERPTHR21641TRANSLATION INITIATION FACTOR-RELATEDcoord: 10..248
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 11..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1309contigE-fasciculatus_F_contig1309:11385..13351 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1309.2338.1mRNA_E-fasciculatus_F_contig1309.2338.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1309 10510..13837 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1309.2338.1 ID=prot_E-fasciculatus_F_contig1309.2338.1|Name=mRNA_E-fasciculatus_F_contig1309.2338.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=259bp
MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLANG
EPSLALLPTRFRKLIWVKRGDYLITSTSAGDFETSAGETGKVRHRVEHIL
NKDQIKHLKKQELWPADDAFGGARLAAGAGSSCPRDGWGDAVAGGGGSSD
DGGGKGMGAAAIEGKSDGGGEVAAAATTAEKDVGSGVKVGVDGAAGEITS
GALRSEGGGDEEEEEEEEEEDDMSDLFVNNNRAAMMQLRVDHEDDEEDSD
SDSDSDEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR039294EIF1AD
IPR006196RNA-binding_domain_S1_IF1
IPR001253TIF_eIF-1A