prot_E-fasciculatus_F_contig12980.2256.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12980.2256.1
Unique Nameprot_E-fasciculatus_F_contig12980.2256.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length627
Homology
BLAST of mRNA_E-fasciculatus_F_contig12980.2256.1 vs. uniprot
Match: A0A6H5K8V0_9PHAE (MutS_I domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8V0_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 5.670e-65
Identity = 261/393 (66.41%), Postives = 273/393 (69.47%), Query Frame = 0
Query:  242 MAVIEEEAAQATAEVAAEAMTQLPQGEESLGGKSLGGKVKGSENPLSDATATGRKEEAKNGGGVTGAPEGGAXXXXXXXXXXXXXXXXXXXXXXXXXRAAAASADLRHPHELDFRDLEEIPESTGPSFWGDDDDATLASTWATTAELEXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----TAPTVSDHGGAVGESSPPKHTGLAEEGVGADATAGAAAGESEPSPGNGIPPGNDESAPVVPSPTSAPATSGSTTTTIKMSRAAAGM-ASVGGEAKAGVAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-EGGEGATSVAADITAFLPGKAASEGPPVVLASPETGXXXXXGSNGSGQREGGAANGMGG 627
            MAVIEEEAAQATA+VAAEA+TQ  +G ES GGK +      SENPLS ATA  RKE+AKNG GVTGAPEGG                          RAAAA+AD R+  ELDFRDLEEIPESTGPSFWGDD                XXXXXXXXXXXXXXXXXXXXXXXXXXXX     TAPTV   G AVGESSPPK+TGLAE G GAD TAGAA GESEP PGNGIPPGNDESA VVPSPTSAPA                   ASVGGEAKAGV   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      A E  EG  SVAAD+ A +P KAASEGPP+ LASPET      G +GSGQREGG ANGMGG
Sbjct:    1 MAVIEEEAAQATAKVAAEAVTQPTRGAESRGGKGIV-----SENPLSGATAKSRKEKAKNGEGVTGAPEGGEEIPAAAAVAQAKAAADTAGVAEAAPRAAAATADFRYQDELDFRDLEEIPESTGPSFWGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATTAPTVPYRGRAVGESSPPKYTGLAEGGPGADVTAGAAGGESEPGPGNGIPPGNDESALVVPSPTSAPAXXXXXXXXXXXXXXXXXXXASVGGEAKAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPSHVAAERVEGGASVAADVAA-MPSKAASEGPPLALASPETAGGAAAGLDGSGQREGGEANGMGG 387          
BLAST of mRNA_E-fasciculatus_F_contig12980.2256.1 vs. uniprot
Match: D7G3V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3V0_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 3.400e-14
Identity = 98/133 (73.68%), Postives = 102/133 (76.69%), Query Frame = 0
Query:  496 MSRAAAGMASVGGEAKAGVAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-EGGEGATSVAADITAFLPGKAASEGPPVVLASPETGXXXXXGSNGSGQREGGAANGMGG 627
            MSRAAAGMASVGGEAKAGVAGR XXXXXXXXXXXXXXXXXXXXXXXXXX               XXXXXX  A EGGEGATSV AD+ A +PGKAASEGPP+ LASPET      G +GSGQREGG ANGMGG
Sbjct:    1 MSRAAAGMASVGGEAKAGVAGRRXXXXXXXXXXXXXXXXXXXXXXXXXXAVGTGTSGSNPPVAAXXXXXXLVAAEGGEGATSVTADVAA-MPGKAASEGPPLALASPETVGGAAAGLDGSGQREGGGANGMGG 132          
BLAST of mRNA_E-fasciculatus_F_contig12980.2256.1 vs. uniprot
Match: A0A1G3A6P0_9BACT (AP2/ERF domain-containing protein n=1 Tax=Planctomycetes bacterium RBG_16_55_9 TaxID=1801968 RepID=A0A1G3A6P0_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 1.200e-5
Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 0
Query:  116 ASTRYIPSDFRGVW-GGPKGKWKARLVSKGQLKQLGTFESERDAARAYNKAARSLHGAGAKLNL 178
            A  R   S ++GVW    KG W+A +V  G+ + LG F  +RDAARAY++AA+  HG  A LN 
Sbjct:   43 ARKRNPRSGYKGVWLAKDKGLWRAAIVHHGKREHLGYFNDKRDAARAYDQAAKKYHGRFAALNF 106          
BLAST of mRNA_E-fasciculatus_F_contig12980.2256.1 vs. uniprot
Match: A0A0S8KRZ4_9BACT (AP2/ERF domain-containing protein n=1 Tax=Phycisphaerae bacterium SM1_79 TaxID=1703410 RepID=A0A0S8KRZ4_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 1.350e-5
Identity = 28/70 (40.00%), Postives = 40/70 (57.14%), Query Frame = 0
Query:  110 NKRRRRASTRYIPSDFRGV-WGGPKGKWKARLVSKGQLKQLGTFESERDAARAYNKAARSLHGAGAKLNL 178
            N+ R++   R   S F+GV W   K KW  R+      K +G F+ E +AA+AY++AA+  HGA A LN 
Sbjct:   38 NRNRQKCQKRRCSSRFKGVSWNRSKEKWSVRINFNAMQKNIGYFDDETEAAKAYDRAAKKYHGAFAVLNF 107          
BLAST of mRNA_E-fasciculatus_F_contig12980.2256.1 vs. uniprot
Match: A0A2K3CQW4_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3CQW4_CHLRE)

HSP 1 Score: 60.1 bits (144), Expect = 1.350e-5
Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 0
Query:  123 SDFRGV-WGGPKGKWKARLVSKGQLKQLGTFESERDAARAYNKAARSLHGAGAKLNL 178
            S +RGV W   KGKW A++   G+   LG F+++ +AARAY+ AAR LHGA AKLN 
Sbjct:  104 SSYRGVTWHKGKGKWMAKIRDAGKTVHLGYFDNQEEAARAYDAAARRLHGAAAKLNF 160          
BLAST of mRNA_E-fasciculatus_F_contig12980.2256.1 vs. uniprot
Match: UPI001BB36FB6 (HNH endonuclease n=1 Tax=Paenibacillus albilobatus TaxID=2716884 RepID=UPI001BB36FB6)

HSP 1 Score: 55.8 bits (133), Expect = 1.620e-5
Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 0
Query:  110 NKRRRRASTRYIPSDFRGV-WGGPKGKWKARLVSKGQLKQLGTFESERDAARAYNKAARSLHGAGAKLNLL 179
            NK   R ST    S ++GV W   + KW ++++  G+ + +G FESER+AA AYNKAA+ L G  AKLN++
Sbjct:   93 NKSPHRKST----SKYKGVYWYKARSKWCSKIMLDGRYRHIGYFESEREAALAYNKAAKELFGDCAKLNVV 159          
BLAST of mRNA_E-fasciculatus_F_contig12980.2256.1 vs. uniprot
Match: A0A8J9RXU9_9CHLO (Probable AP2-like ethylene-responsive transcription factor PLT2 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RXU9_9CHLO)

HSP 1 Score: 59.3 bits (142), Expect = 1.970e-5
Identity = 43/96 (44.79%), Postives = 51/96 (53.12%), Query Frame = 0
Query:  103 GPAGDRVNKRRRRASTRYIPSDFRGVWGGPKGKWKARLVSKGQLKQLGTFESERDAARAYNKAARSLHGAGAKLNLLPDEVPATAPQEAAPETTAE 198
            G A ++  KRRR +S       FRGV     GKWKA + +    K LG FE E DAARAY+ AA  L G  A  N   D+V A  PQ AA +  AE
Sbjct:  162 GTAEEQAKKRRRTSS-------FRGVTRAG-GKWKAAIRANNVKKDLGVFEDELDAARAYDAAAVQLLGPAAVTNFNKDDVMAALPQAAAEQVAAE 249          
BLAST of mRNA_E-fasciculatus_F_contig12980.2256.1 vs. uniprot
Match: A0A328AC93_9CAUL (Endonuclease n=1 Tax=Phenylobacterium deserti TaxID=1914756 RepID=A0A328AC93_9CAUL)

HSP 1 Score: 55.1 bits (131), Expect = 3.170e-5
Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 0
Query:  134 GKWKARLVSKGQLKQLGTFESERDAARAYNKAARSLHGAGAKLNLLPDE 182
            G+W+A +V  G+   LGTF +E DAA AY+KAAR LHGA A+LN  PDE
Sbjct:  113 GRWQAVIVCDGRRHYLGTFGAELDAALAYDKAARELHGAFARLNF-PDE 160          
BLAST of mRNA_E-fasciculatus_F_contig12980.2256.1 vs. uniprot
Match: A0A835VXR6_CHLIN (Uncharacterized protein n=2 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835VXR6_CHLIN)

HSP 1 Score: 58.5 bits (140), Expect = 4.050e-5
Identity = 31/60 (51.67%), Postives = 39/60 (65.00%), Query Frame = 0
Query:  123 SDFRGV-WGGPKGKWKARLVSKGQLKQLGTFESERDAARAYNKAARSLHGAGAKLNLLPD 181
            S FRGV W     KW+A++   G+   LG F+S+ DAARAY+ AAR +HGA AKLN   D
Sbjct:  103 SSFRGVCWNKNVRKWQAQIRDAGKTLVLGCFDSQEDAARAYDAAARRIHGAAAKLNFPGD 162          
BLAST of mRNA_E-fasciculatus_F_contig12980.2256.1 vs. uniprot
Match: A8JAT5_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8JAT5_CHLRE)

HSP 1 Score: 53.1 bits (126), Expect = 6.380e-5
Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 0
Query:  116 ASTRYIPSDFRGV-WGGPKGKWKARLVSKGQLKQLGTFESERDAARAYNKAARSLHGAGAKLNL 178
            AS + + S +RGV W     +W+A + S G+   LG+F SE DAARA++KAA  L G  AKLN 
Sbjct:   32 ASDKPVSSKYRGVCWNRKNKRWQAAINSGGKYVYLGSFLSEYDAARAFDKAAVKLRGLRAKLNF 95          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12980.2256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5K8V0_9PHAE5.670e-6566.41MutS_I domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G3V0_ECTSI3.400e-1473.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1G3A6P0_9BACT1.200e-545.31AP2/ERF domain-containing protein n=1 Tax=Planctom... [more]
A0A0S8KRZ4_9BACT1.350e-540.00AP2/ERF domain-containing protein n=1 Tax=Phycisph... [more]
A0A2K3CQW4_CHLRE1.350e-552.63Uncharacterized protein n=1 Tax=Chlamydomonas rein... [more]
UPI001BB36FB61.620e-545.07HNH endonuclease n=1 Tax=Paenibacillus albilobatus... [more]
A0A8J9RXU9_9CHLO1.970e-544.79Probable AP2-like ethylene-responsive transcriptio... [more]
A0A328AC93_9CAUL3.170e-559.18Endonuclease n=1 Tax=Phenylobacterium deserti TaxI... [more]
A0A835VXR6_CHLIN4.050e-551.67Uncharacterized protein n=2 Tax=Chlamydomonas ince... [more]
A8JAT5_CHLRE6.380e-546.88Predicted protein (Fragment) n=1 Tax=Chlamydomonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 235..255
NoneNo IPR availablePANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 85..248
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..627
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.574
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 124..185
e-value: 4.5E-9
score: 46.2
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 124..179
score: 12.55
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10coord: 123..180
e-value: 2.2E-11
score: 45.4
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 124..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12980contigE-fasciculatus_F_contig12980:1376..3803 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12980.2256.1mRNA_E-fasciculatus_F_contig12980.2256.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12980 1376..3803 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12980.2256.1 ID=prot_E-fasciculatus_F_contig12980.2256.1|Name=mRNA_E-fasciculatus_F_contig12980.2256.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=627bp
MPRWTPLAVCCSYVSYWATTAAFPVVMPAATGVKRAVLGSAGGRKLQSTT
AALPLRLPLLPSARPAARRVFQQRMMSSSTSQQQQQQQVSTPSPDPAAAA
PPGPAGDRVNKRRRRASTRYIPSDFRGVWGGPKGKWKARLVSKGQLKQLG
TFESERDAARAYNKAARSLHGAGAKLNLLPDEVPATAPQEAAPETTAEAE
APVADPASAAEALAAEESAAAAAAAAAAAAAHAEREAVLAAMAVIEEEAA
QATAEVAAEAMTQLPQGEESLGGKSLGGKVKGSENPLSDATATGRKEEAK
NGGGVTGAPEGGAEKPAAAAATQAKAAAETAVVAEAAPRAAAASADLRHP
HELDFRDLEEIPESTGPSFWGDDDDATLASTWATTAELESGGGGDGGNAA
AASPVKEGSSSSSSVATTAPTVSDHGGAVGESSPPKHTGLAEEGVGADAT
AGAAAGESEPSPGNGIPPGNDESAPVVPSPTSAPATSGSTTTTIKMSRAA
AGMASVGGEAKAGVAGRRRRRSLSTLPSSQKAKSSPPPPPASAAVGAGTS
SPDPPVAAPPLPPSLVAAEGGEGATSVAADITAFLPGKAASEGPPVVLAS
PETGGGAAAGSNGSGQREGGAANGMGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom