prot_E-fasciculatus_F_contig12970.2251.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12970.2251.1
Unique Nameprot_E-fasciculatus_F_contig12970.2251.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length287
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12970.2251.1 vs. uniprot
Match: A0A6H5L1W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1W2_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 8.570e-40
Identity = 142/288 (49.31%), Postives = 156/288 (54.17%), Query Frame = 0 
Query:    3 GVAKKATQVPTTTKXXXXXXXXXXXXXXXXXXRLEPVARADAVELLRQAVAKYRGAQVSAASPSAPSVSSPLPRXXXXXXXXXXXXYTSTKSSATPSYSXXXSYASSTGGIVSGGGGYGGSDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXSNRGGDTGKAKLTPGVPTPSASGDGARGGDPGSSTSSSIDSSGGQVEXXXXXXXXXXXXXXXXXXXAEEFAELAARCLGSALPEIALEA---HSLYVRAEASGLQPRTTALLPAYPLTADADDVVDADKDEDGHRRR 287
            G+AKK  Q PTT K                  RLEP+ARADAVELLRQAV KYRGAQVSAASP++ S       XXX    XXXXX             XXX               YGGSDGT                   XXXXXXXX + GG+TG ++L+   P P ASGDGA  GD  SST ++   +  +VE                   AEEFAELAARCLGSALPEIALEA   HSLYVRAEASGLQPRTTALLP YPLT D    VD   D+DGH RR
Sbjct:  171 GIAKKTAQAPTTAKTRKRKGRGWRGR------RLEPIARADAVELLRQAVVKYRGAQVSAASPTSSSXXXXXXXXXXPVASXXXXXXXXXXXXXXXXXXXXXXXXXXXA--------YGGSDGTSSYASISDGVVVIGRGVGSXXXXXXXXXSNGGETGTSRLSSSAPIPPASGDGANAGDTRSSTGNTNIDTSVRVESGSVGSGHDSTAVAAAAVAAEEFAELAARCLGSALPEIALEASVAHSLYVRAEASGLQPRTTALLPEYPLTTDD---VDTQDDDDGHWRR 441
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12970.2251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L1W2_9PHAE8.570e-4049.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12970contigE-fasciculatus_F_contig12970:36..1286 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12970.2251.1mRNA_E-fasciculatus_F_contig12970.2251.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12970 36..1286 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12970.2251.1 ID=prot_E-fasciculatus_F_contig12970.2251.1|Name=mRNA_E-fasciculatus_F_contig12970.2251.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=287bp
GGGVAKKATQVPTTTKRKQQQQQQQQRRGRGRRRRLEPVARADAVELLRQ
AVAKYRGAQVSAASPSAPSVSSPLPRPVPSPPPSPSPSYTSTKSSATPSY
SSTSSYASSTGGIVSGGGGYGGSDGTSNYASSSDGVVVIGGGFSSTSSTS
STSSNRGGDTGKAKLTPGVPTPSASGDGARGGDPGSSTSSSIDSSGGQVE
SGDIGSGDESTAVAAAAVAAEEFAELAARCLGSALPEIALEAHSLYVRAE
ASGLQPRTTALLPAYPLTADADDVVDADKDEDGHRRR
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