prot_E-fasciculatus_F_contig1284.2143.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1284.2143.1
Unique Nameprot_E-fasciculatus_F_contig1284.2143.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length321
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1284.2143.1 vs. uniprot
Match: D7G1Y8_ECTSI (Similar to mitochondrial import inner membrane translocase,TIM17/22/23-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Y8_ECTSI)

HSP 1 Score: 469 bits (1208), Expect = 1.410e-164
Identity = 271/320 (84.69%), Postives = 279/320 (87.19%), Query Frame = 0 
Query:    1 MGWFGLGRRKPADEGSQSSPAPSTDGSNMSGG-GAQAASESIARSSMSMAEPVGGSKVTAAXXXXXXXXXXRADAFDKLSAGEEQQEQH-GEGIAGASPGYAVRLKSAFLDTVTTANRAPETLEEAMAVIKGERAVKPDYGRAVSTVSAAFAGGCAHGWWHGAALAAKYPPHQRSIVRVRAGARGGLRFATFALIFEGSSAIMEALRRKKDFVGGTVGGALAGMAYGXXXXXAAARSGLFYGVWLGGVFGLFRNHVASLREQARLAEEDERLAQEERDAIGEAALRRSIAGIEAQLRTWPTAAADSEDGTDTTELASSRR 318
            MGWFGLGRRKPADE S SSP  STDG NMS G GAQAASES  RS   MAEPVG  K T            RADA DK S  EEQQEQ  GEG+A +SPGYA RLK+AFLDTV TA RAPET+EEAMAVIKGERAVKPDYGRAV TVSAAFAGGCAHGWWHGAALAAKYPPHQRSIVRVRAGAR GLRFATFALIFEGSSA+MEALRRKKDFVGGTVGGALAGMAYGXXXXXAAARSGLFYGVWLGGVFGLFRNHVASLREQARLAEEDERLAQEERDAIGE ALRRSIAGI+AQ+RTWPTAAADSED TDTTELASS+R
Sbjct:    1 MGWFGLGRRKPADESSPSSPTLSTDGINMSTGCGAQAASESTGRSCTPMAEPVGAPKTTL----NAPAAAMRADACDKASPVEEQQEQQQGEGVADSSPGYAHRLKAAFLDTVATAKRAPETMEEAMAVIKGERAVKPDYGRAVGTVSAAFAGGCAHGWWHGAALAAKYPPHQRSIVRVRAGARRGLRFATFALIFEGSSAVMEALRRKKDFVGGTVGGALAGMAYGXXXXXAAARSGLFYGVWLGGVFGLFRNHVASLREQARLAEEDERLAQEERDAIGETALRRSIAGIDAQVRTWPTAAADSEDETDTTELASSQR 316
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1284.2143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1Y8_ECTSI1.410e-16484.69Similar to mitochondrial import inner membrane tra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 254..274
NoneNo IPR availablePFAMPF02466Tim17coord: 144..237
e-value: 6.6E-8
score: 32.9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 232..236
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 237..254
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 210..231
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 255..320
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..209
NoneNo IPR availableTMHMMTMhelixcoord: 236..255
NoneNo IPR availableTMHMMTMhelixcoord: 210..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1284contigE-fasciculatus_F_contig1284:5530..9878 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1284.2143.1mRNA_E-fasciculatus_F_contig1284.2143.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1284 5028..9878 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1284.2143.1 ID=prot_E-fasciculatus_F_contig1284.2143.1|Name=mRNA_E-fasciculatus_F_contig1284.2143.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=321bp
MGWFGLGRRKPADEGSQSSPAPSTDGSNMSGGGAQAASESIARSSMSMAE
PVGGSKVTAAAAAAAAAAAARADAFDKLSAGEEQQEQHGEGIAGASPGYA
VRLKSAFLDTVTTANRAPETLEEAMAVIKGERAVKPDYGRAVSTVSAAFA
GGCAHGWWHGAALAAKYPPHQRSIVRVRAGARGGLRFATFALIFEGSSAI
MEALRRKKDFVGGTVGGALAGMAYGVSGGVAAARSGLFYGVWLGGVFGLF
RNHVASLREQARLAEEDERLAQEERDAIGEAALRRSIAGIEAQLRTWPTA
AADSEDGTDTTELASSRRQS*
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