mRNA_E-fasciculatus_F_contig1284.2143.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1284.2143.1 vs. uniprot
Match: D7G1Y8_ECTSI (Similar to mitochondrial import inner membrane translocase,TIM17/22/23-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Y8_ECTSI) HSP 1 Score: 472 bits (1214), Expect = 8.900e-163 Identity = 271/320 (84.69%), Postives = 279/320 (87.19%), Query Frame = 1
Query: 1 MGWFGLGRRKPADEGSQSSPAPSTDGSNMSGG-GAQAASESIARSSMSMAEPVGGSKVTAAXXXXXXXXXXRADAFDKLSAGEEQQEQH-GEGIAGASPGYAVRLKSAFLDTVTTANRAPETLEEAMAVIKGERAVKPDYGRAVSTVSAAFAGGCAHGWWHGAALAAKYPPHQRSIVRVRAGARGGLRFATFALIFEGSSAIMEALRRKKDFVGGTVGGALAGMAYGXXXXXAAARSGLFYGVWLGGVFGLFRNHVASLREQARLAEEDERLAQEERDAIGEAALRRSIAGIEAQLRTWPTAAADSEDGTDTTELASSRR 954
MGWFGLGRRKPADE S SSP STDG NMS G GAQAASES RS MAEPVG K T RADA DK S EEQQEQ GEG+A +SPGYA RLK+AFLDTV TA RAPET+EEAMAVIKGERAVKPDYGRAV TVSAAFAGGCAHGWWHGAALAAKYPPHQRSIVRVRAGAR GLRFATFALIFEGSSA+MEALRRKKDFVGGTVGGALAGMAYGXXXXXAAARSGLFYGVWLGGVFGLFRNHVASLREQARLAEEDERLAQEERDAIGE ALRRSIAGI+AQ+RTWPTAAADSED TDTTELASS+R
Sbjct: 1 MGWFGLGRRKPADESSPSSPTLSTDGINMSTGCGAQAASESTGRSCTPMAEPVGAPKTTL----NAPAAAMRADACDKASPVEEQQEQQQGEGVADSSPGYAHRLKAAFLDTVATAKRAPETMEEAMAVIKGERAVKPDYGRAVGTVSAAFAGGCAHGWWHGAALAAKYPPHQRSIVRVRAGARRGLRFATFALIFEGSSAVMEALRRKKDFVGGTVGGALAGMAYGXXXXXAAARSGLFYGVWLGGVFGLFRNHVASLREQARLAEEDERLAQEERDAIGETALRRSIAGIDAQVRTWPTAAADSEDETDTTELASSQR 316 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1284.2143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1284.2143.1 >prot_E-fasciculatus_F_contig1284.2143.1 ID=prot_E-fasciculatus_F_contig1284.2143.1|Name=mRNA_E-fasciculatus_F_contig1284.2143.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=321bp MGWFGLGRRKPADEGSQSSPAPSTDGSNMSGGGAQAASESIARSSMSMAEback to top mRNA from alignment at E-fasciculatus_F_contig1284:5028..9878- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1284.2143.1 ID=mRNA_E-fasciculatus_F_contig1284.2143.1|Name=mRNA_E-fasciculatus_F_contig1284.2143.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4851bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1284:5028..9878- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1284:5028..9878- >mRNA_E-fasciculatus_F_contig1284.2143.1 ID=mRNA_E-fasciculatus_F_contig1284.2143.1|Name=mRNA_E-fasciculatus_F_contig1284.2143.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1926bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1284:5028..9878- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |