prot_E-fasciculatus_F_contig1208.1624.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1208.1624.1
Unique Nameprot_E-fasciculatus_F_contig1208.1624.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length131
Homology
BLAST of mRNA_E-fasciculatus_F_contig1208.1624.1 vs. uniprot
Match: D7G779_ECTSI (L51_S25_CI-B8 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G779_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 1.770e-88
Identity = 124/129 (96.12%), Postives = 129/129 (100.00%), Query Frame = 0
Query:    1 MATRGVFQLRKLTLKYCEHSGSSKGAREFIRNRIVEFANNTPAAEVVTELRPGQHPYIMGDYVSGEVKTIGIKNIAPGEIMDYAMMLRNSSGHKVRKFKKPVESRYPSIQGVWDIEAPLHTTDIHVEHH 129
            MATRGVFQLRKLTLKYC+HSGSSKGAREFIR+RIVEFANNTPAAEVVTELRPG+HPYIMGDYV+GEVKTIGIKNIAPGEIMDYAMMLRNSSGHKVRKFKKPVESRYPSIQGVWDI+APLHTTDIHVEHH
Sbjct:    1 MATRGVFQLRKLTLKYCDHSGSSKGAREFIRHRIVEFANNTPAAEVVTELRPGKHPYIMGDYVTGEVKTIGIKNIAPGEIMDYAMMLRNSSGHKVRKFKKPVESRYPSIQGVWDIDAPLHTTDIHVEHH 129          
BLAST of mRNA_E-fasciculatus_F_contig1208.1624.1 vs. uniprot
Match: A0A835ZEX9_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEX9_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.060e-36
Identity = 60/128 (46.88%), Postives = 82/128 (64.06%), Query Frame = 0
Query:    1 MATRGVFQLRKLTLKYCEHSGSSKGAREFIRNRIVEFANNTPAAEVVTELRPGQHPYIMGDYVSGEVKTIGIKNIAPGEIMDYAMMLRNSSGHKVRKFKKPVESRYPSIQGVWDIEAPLHTTDIHVEH 128
            MATRGV QL+++ ++YC+  GSS+G R+FI   +V FA   P  E++TE+R  +HP I  DY++G  KT+G+KN AP  I D+   LR ++G K R+F KPV SR PS+QG WD E         V H
Sbjct:    1 MATRGVMQLQRIHIRYCDWGGSSQGMRDFIGRELVAFAKAVPHCEIITEVRRNRHPIIRADYLTGIPKTLGVKNEAPSAIRDFLHRLRTTTGRKQRRFDKPVVSRLPSVQGAWDPEVAYQAMRTTVRH 128          
BLAST of mRNA_E-fasciculatus_F_contig1208.1624.1 vs. uniprot
Match: A0A024G7B8_9STRA (L51_S25_CI-B8 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G7B8_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.600e-32
Identity = 56/124 (45.16%), Postives = 84/124 (67.74%), Query Frame = 0
Query:    1 MATRGVFQLRKLTLKYCEHSGSSKGAREFIRNR-IVEFANNTPAAEVVTELRPGQHPYIMGDYVSGEVKTIGIKNIAPGEIMDYAMMLRNSSGHKVRKFKKPVESRYPSIQGVW--DIEAPLHT 121
            MATRG++QL+++T++YC+HSGSS+  R+F+ N+  +EF    P     TEL+PG+HP ++GDYV+ + K   +KN     IM     LR+SSG K+ K K+PV ++ PSIQG+W  D++ P  T
Sbjct:    1 MATRGIWQLKEVTIRYCQHSGSSRHVRDFLSNKQFLEFVKENPQVSFRTELKPGRHPVLIGDYVTNQQKVCDVKNKEQKVIMLQLQRLRDSSGRKMTKMKRPVITKCPSIQGIWQQDMQFPEFT 124          
BLAST of mRNA_E-fasciculatus_F_contig1208.1624.1 vs. uniprot
Match: F0WUQ8_9STRA (Uncharacterized protein AlNc14C277G10065 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WUQ8_9STRA)

HSP 1 Score: 119 bits (298), Expect = 3.690e-32
Identity = 56/124 (45.16%), Postives = 83/124 (66.94%), Query Frame = 0
Query:    1 MATRGVFQLRKLTLKYCEHSGSSKGAREFIRNR-IVEFANNTPAAEVVTELRPGQHPYIMGDYVSGEVKTIGIKNIAPGEIMDYAMMLRNSSGHKVRKFKKPVESRYPSIQGVW--DIEAPLHT 121
            MATRG++QL++LT++YC+HSGSS+  R+F+ N+  ++F    P     TEL+PG+HP ++GDYV+ E K   +KN     IM     LR+SSG K+ + K+P+ S+ PSIQG+W  D+  P  T
Sbjct:    1 MATRGIWQLKELTIRYCQHSGSSRYIRDFLNNKKFIDFVKENPQVAFRTELKPGRHPVLIGDYVTNEQKVCDVKNKEEKWIMLQLQRLRDSSGRKMTRMKRPIISKRPSIQGIWQQDMRFPEFT 124          
BLAST of mRNA_E-fasciculatus_F_contig1208.1624.1 vs. uniprot
Match: A0A7S1GKP3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKP3_CYCTE)

HSP 1 Score: 114 bits (286), Expect = 2.900e-30
Identity = 58/127 (45.67%), Postives = 80/127 (62.99%), Query Frame = 0
Query:    1 MATRGVFQLRKLTLKYCEHSGSSKGAREFIRN-RIVEFANNTPAAEVVTELRPGQHPYIMGDYVSGEVKTIGIKNIAPGEIMDYAMMLRNSSGHKVRKFKKPVESRYPSIQGVWDIEAPLHTTDIHV 126
            MATRGV+QL +L L YCEH GSS+  R++I + RIV++A + P  EV   +R G+HP I G+Y++G+ K I +KN     I     ML NSSG K++K K+ V ++ PS+QGVW     L  T   V
Sbjct:    1 MATRGVYQLARLRLVYCEHGGSSRTIRDYISSGRIVQWAKDHPHVEVEVHVRNGKHPLIEGEYLTGQPKQITVKNQTMERIQQVVDMLHNSSGRKIKKLKRTVVTQTPSVQGVWTPMLDLQNTKFTV 127          
BLAST of mRNA_E-fasciculatus_F_contig1208.1624.1 vs. uniprot
Match: A0A7S2W7Q4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W7Q4_9STRA)

HSP 1 Score: 115 bits (288), Expect = 3.110e-30
Identity = 60/128 (46.88%), Postives = 75/128 (58.59%), Query Frame = 0
Query:    1 MATRGVFQLRKLTLKYCEHSGSSKGAREFIRN-RIVEFANNTPAAEVVTELRPGQHPYIMGDYVSGEVKTIGIKNIAPGEIMDYAMMLRNSSGHKVRKFKKPVESRYPSIQGVWDIEAPLHTTDIHVE 127
            MATRGV QL+KL + YCEH GSS   REFI + +IV FA   P+  V+ +LR G HPYI G Y++G  K I IKN     I+    ML N+SG K+ K  K   +  PSIQGVW     +  +   VE
Sbjct:   31 MATRGVKQLQKLRIVYCEHGGSSASIREFISSGKIVSFAEKNPSVTVIAQLRNGNHPYIKGQYLTGNSKQICIKNETVPRIVKVVHMLNNTSGRKITKLGKSTRTATPSIQGVWTPMLDISDSSFQVE 158          
BLAST of mRNA_E-fasciculatus_F_contig1208.1624.1 vs. uniprot
Match: A0A7S1CP68_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CP68_9STRA)

HSP 1 Score: 114 bits (284), Expect = 6.170e-30
Identity = 54/114 (47.37%), Postives = 72/114 (63.16%), Query Frame = 0
Query:    1 MATRGVFQLRKLTLKYCEHSGSSKGAREFIRNRIVEFANNTPAAEVVTELRPGQHPYIMGDYVSGEVKTIGIKNIAPGEIMDYAMMLRNSSGHKVRKFKKPVESRYPSIQGVWD 114
            M TRGV+QL++LTL+YC  SGSS G REF+R+ +VEFA   P   V T +RP +HP  +GDY++G  K   +KN     +      LR+  G KV++   PV S  PS+QGVWD
Sbjct:    9 MCTRGVWQLKELTLRYCRSSGSSAGVREFMRDGLVEFARTNPQLTVRTVVRPNRHPNAIGDYLNGNTKVTDLKNKDAEAVGAVLQRLRDDGGRKVQRHHVPVRSSAPSVQGVWD 122          
BLAST of mRNA_E-fasciculatus_F_contig1208.1624.1 vs. uniprot
Match: A0A8J9RFE5_9CHLO (Probable 54S ribosomal protein L51, mitochondrial n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RFE5_9CHLO)

HSP 1 Score: 112 bits (281), Expect = 1.570e-29
Identity = 53/126 (42.06%), Postives = 82/126 (65.08%), Query Frame = 0
Query:    1 MATRGVFQLRKLTLKYCEHSGSSKGAREFIRNRIVEFANNTPAAEVVTELRPGQHPYIMGDYVSGEVKTIGIKNIAPGEIMDYAMMLRNSSGH------KVRKFKKPVESR-------YPSIQGVW 113
            MA  GV+QLRKLTL +C  SGSS+GAR F+ + +  F    P  +++ ELRPGQHPY+  +Y +G V+T+G+KN  P E++ +A+MLR+++G       KVR+ +  +++         PS+QG+W
Sbjct:    1 MARLGVWQLRKLTLNFCSFSGSSRGARAFVEDFLPTFKQENPHLQIIEELRPGQHPYLKAEYRNGRVRTVGVKNELPNEVLRHAVMLRSAAGRATHVKVKVRQTQPAIKTEDGQHRRASPSVQGMW 126          
BLAST of mRNA_E-fasciculatus_F_contig1208.1624.1 vs. uniprot
Match: UPI000900E4B3 (54S ribosomal protein L51, mitochondrial-like n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI000900E4B3)

HSP 1 Score: 112 bits (279), Expect = 2.160e-29
Identity = 54/119 (45.38%), Postives = 73/119 (61.34%), Query Frame = 0
Query:    1 MATRGVFQLRKLTLKYCEHSGSSKGAREFIRNRIVEFANNTPAAEVVTELRPGQHPYIMGDYVSGEVKTIGIKNIAPGEIMDYAMMLRNSSGHKVRKFKKPVESRYPSIQGVWDIEAPL 119
            MA RGV+QL+KL + YC   GSSKG REFI + +  F    P  EVVTEL  GQHP++ G Y +   + + ++N+ P EI+  A  LRNS G KV K K    +++PS+QG W  E  +
Sbjct:    1 MALRGVWQLQKLVVSYCNWGGSSKGLREFIESHLPAFKEVNPHLEVVTELNRGQHPFLKGLYKNKNERAVSVRNLNPEEILLEATRLRNSLGRKVVKMKTRHVTKHPSVQGTWSTELKM 119          
BLAST of mRNA_E-fasciculatus_F_contig1208.1624.1 vs. uniprot
Match: A0A7S3V4V6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4V6_9STRA)

HSP 1 Score: 111 bits (278), Expect = 6.100e-29
Identity = 56/114 (49.12%), Postives = 72/114 (63.16%), Query Frame = 0
Query:    1 MATRGVFQLRKLTLKYCEHSGSSKGAREFIRNR-IVEFANNTPAAEVVTELRPGQHPYIMGDYVSGEVKTIGIKNIAPGEIMDYAMMLRNSSGHKVRKFKKPVESRYPSIQGVW 113
            MATRGV QL KL + +CEH GSS   RE+I+   IV+FA + P  EV  +LR G+HPYI  +Y++G  K + +KN     I D   ML NSSG K+ K   PV +  PS+QGVW
Sbjct:   12 MATRGVKQLAKLRVVFCEHGGSSNLVREYIKTGGIVQFATDNPTVEVEAKLRNGKHPYIKAEYITGFSKQVCVKNEPLERIQDVMTMLNNSSGRKISKIGNPVRTDTPSVQGVW 125          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1208.1624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G779_ECTSI1.770e-8896.12L51_S25_CI-B8 domain-containing protein n=2 Tax=Ec... [more]
A0A835ZEX9_9STRA1.060e-3646.88Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A024G7B8_9STRA2.600e-3245.16L51_S25_CI-B8 domain-containing protein n=1 Tax=Al... [more]
F0WUQ8_9STRA3.690e-3245.16Uncharacterized protein AlNc14C277G10065 n=1 Tax=A... [more]
A0A7S1GKP3_CYCTE2.900e-3045.67Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2W7Q4_9STRA3.110e-3046.88Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1CP68_9STRA6.170e-3047.37Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A8J9RFE5_9CHLO1.570e-2942.06Probable 54S ribosomal protein L51, mitochondrial ... [more]
UPI000900E4B32.160e-2945.3854S ribosomal protein L51, mitochondrial-like n=1 ... [more]
A0A7S3V4V6_9STRA6.100e-2949.12Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007741Ribosomal protein/NADH dehydrogenase domainSMARTSM00916L51_S25_CI_B8_2coord: 18..91
e-value: 8.9E-11
score: 51.8
IPR007741Ribosomal protein/NADH dehydrogenase domainPFAMPF05047L51_S25_CI-B8coord: 26..74
e-value: 2.2E-7
score: 30.7
NoneNo IPR availableGENE3D3.40.30.10coord: 2..127
e-value: 3.5E-39
score: 135.9
IPR03992739S ribosomal protein L43/54S ribosomal protein L51PANTHERPTHR2139639S RIBOSOMAL PROTEIN L43coord: 1..116
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 8..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1208contigE-fasciculatus_F_contig1208:11458..13007 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1208.1624.1mRNA_E-fasciculatus_F_contig1208.1624.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1208 10508..13046 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1208.1624.1 ID=prot_E-fasciculatus_F_contig1208.1624.1|Name=mRNA_E-fasciculatus_F_contig1208.1624.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=131bp
MATRGVFQLRKLTLKYCEHSGSSKGAREFIRNRIVEFANNTPAAEVVTEL
RPGQHPYIMGDYVSGEVKTIGIKNIAPGEIMDYAMMLRNSSGHKVRKFKK
PVESRYPSIQGVWDIEAPLHTTDIHVEHHG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR039927MRPL43/MRPL51
IPR007741Ribosome/NADH_DH