prot_E-fasciculatus_F_contig11589.1267.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig11589.1267.1
Unique Nameprot_E-fasciculatus_F_contig11589.1267.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length75
Homology
BLAST of mRNA_E-fasciculatus_F_contig11589.1267.1 vs. uniprot
Match: D8LR79_ECTSI (Cyclin-dependent kinases regulatory subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR79_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 2.040e-30
Identity = 54/70 (77.14%), Postives = 61/70 (87.14%), Query Frame = 0
Query:    1 ISQLPPAQLLSEAELESFGVFQDRGWVHYSILR-RPNILLFRRPMGTDPVTGAVDPVQQRMAQEGYRQQL 69
            +++L P+QLLSEAELES GVFQDRGW HYSILR  PNILLFRRPMGTDPVTG VDP +QRMA+  +RQQL
Sbjct:    1 MNKLSPSQLLSEAELESLGVFQDRGWEHYSILRPEPNILLFRRPMGTDPVTGTVDPARQRMAEAAFRQQL 70          
BLAST of mRNA_E-fasciculatus_F_contig11589.1267.1 vs. uniprot
Match: A0A7S2BBH9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BBH9_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.260e-18
Identity = 40/72 (55.56%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    4 LPPAQLLSEAELESFGVFQDRGWVHYSILR-RPNILLFRRPMGTDPVTGAVDPVQQRMAQEGYRQQLNPDQS 74
            LP A+LLSE E    GV Q RGW HY+I R  P+ILLFRRP+GTDPVTG +DP  +R A++ Y+  L  +Q+
Sbjct:   49 LPKARLLSEQEWRGIGVQQSRGWAHYAIHRPEPHILLFRRPLGTDPVTGKIDPALEREAKDAYQNNLELNQA 120          
BLAST of mRNA_E-fasciculatus_F_contig11589.1267.1 vs. uniprot
Match: K0TR55_THAOC (Cyclin-dependent kinases regulatory subunit n=2 Tax=Thalassiosirales TaxID=33847 RepID=K0TR55_THAOC)

HSP 1 Score: 80.5 bits (197), Expect = 6.510e-18
Identity = 42/67 (62.69%), Postives = 48/67 (71.64%), Query Frame = 0
Query:    4 LPPAQLLSEAELESFGVFQDRGWVHYSILR-RPNILLFRRPMGTDPVTGAVDPVQQRMAQEGYRQQL 69
            LP  +LLSE E  S GV Q RGW HY+I R  P+ILLFRRP+GTDP TGAVDP  +RMA E Y+ Q 
Sbjct:   45 LPKTRLLSENEWRSIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQTGAVDPELKRMALEEYKGQF 111          
BLAST of mRNA_E-fasciculatus_F_contig11589.1267.1 vs. uniprot
Match: A0A7S3VGP8_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGP8_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.430e-17
Identity = 41/75 (54.67%), Postives = 51/75 (68.00%), Query Frame = 0
Query:    1 ISQLPPAQLLSEAELESFGVFQDRGWVHYSILR-RPNILLFRRPMGTDPVTGAVDPVQQRMAQEGYRQQLNPDQS 74
            + QLP  +LLSE+E    GV Q RGWVHY++ R  P+ILLFRRP+GTDP TG VDP  +R A E Y+ Q    Q+
Sbjct:   29 LRQLPRNRLLSESEWRGVGVQQSRGWVHYALHRPEPHILLFRRPLGTDPQTGRVDPELKRQALEEYKTQFGLKQN 103          
BLAST of mRNA_E-fasciculatus_F_contig11589.1267.1 vs. uniprot
Match: A0A1E7F3Q6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3Q6_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 3.870e-17
Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 0
Query:    4 LPPAQLLSEAELESFGVFQDRGWVHYSILR-RPNILLFRRPMGTDPVTGAVDPVQQRMAQEGYRQQLN 70
            LP ++LLSE+E    GV Q RGW HY+I R  P+ILLFRRP+GTDP +G VDP  +R A+E YR Q +
Sbjct:   34 LPKSRLLSESEWRGIGVQQSRGWGHYAIHRPEPHILLFRRPLGTDPQSGRVDPEMERKAREEYRAQYD 101          
BLAST of mRNA_E-fasciculatus_F_contig11589.1267.1 vs. uniprot
Match: A0A835YHQ2_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHQ2_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 5.340e-17
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 0
Query:    4 LPPAQLLSEAELESFGVFQDRGWVHYSILR-RPNILLFRRPMGTDPVTGAVDPVQQRMAQEGYRQQL 69
            LP  +LL E E    GV Q RGWVHY+I R  P+ILLF RP+GTDP++G VDP ++R A+EGY + L
Sbjct:   31 LPNTRLLQEEEWRLLGVQQSRGWVHYAIHRPEPHILLFHRPLGTDPLSGQVDPEKEREAKEGYAEHL 97          
BLAST of mRNA_E-fasciculatus_F_contig11589.1267.1 vs. uniprot
Match: D7G7T5_ECTSI (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T5_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 6.760e-17
Identity = 36/67 (53.73%), Postives = 52/67 (77.61%), Query Frame = 0
Query:    4 LPPAQLLSEAELESFGVFQDRGWVHYSILR-RPNILLFRRPMGTDPVTGAVDPVQQRMAQEGYRQQL 69
            LP +++L+E E    GV Q RGW+HY+I R  P+ILLF+RP+GTDPV+G VDPV ++ A++ Y+Q+L
Sbjct:   31 LPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQEL 97          
BLAST of mRNA_E-fasciculatus_F_contig11589.1267.1 vs. uniprot
Match: A0A6S9ANL1_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9ANL1_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.570e-16
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 0
Query:    4 LPPAQLLSEAELESFGVFQDRGWVHYSILR-RPNILLFRRPMGTDPVTGAVDPVQQRMAQEGYRQQL 69
            LP  +LLSE+E    GV Q RGW+HY+I R  P+ILLFRRP+GTDP +G VDP  +R A+E Y+ Q 
Sbjct:   33 LPKNRLLSESEWRGIGVQQSRGWMHYAIHRPEPHILLFRRPLGTDPQSGQVDPELEREAREEYKNQF 99          
BLAST of mRNA_E-fasciculatus_F_contig11589.1267.1 vs. uniprot
Match: A0A7S0UH58_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UH58_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.590e-16
Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 0
Query:    4 LPPAQLLSEAELESFGVFQDRGWVHYSILR-RPNILLFRRPMGTDPVTGAVDPVQQRMAQEGYRQQ 68
            LP ++LLSE+E    GV Q RGW HY+I R  P+ILLFRRP+GTDP +G VDP  +R A++ YR Q
Sbjct:   63 LPKSRLLSESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPEMERKARDEYRSQ 128          
BLAST of mRNA_E-fasciculatus_F_contig11589.1267.1 vs. uniprot
Match: A0A7R9U1M9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1M9_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.610e-16
Identity = 39/68 (57.35%), Postives = 47/68 (69.12%), Query Frame = 0
Query:    3 QLPPAQLLSEAELESFGVFQDRGWVHYSILR-RPNILLFRRPMGTDPVTGAVDPVQQRMAQEGYRQQL 69
            +L   +LLS+AE    GV Q RGW HY+I R  P+ILLFRRP+GTDP TG VDP  QR A+E Y + L
Sbjct:   66 RLSKTKLLSDAEWRELGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPTTGRVDPEAQREAKEAYMRSL 133          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11589.1267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR79_ECTSI2.040e-3077.14Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
A0A7S2BBH9_9STRA2.260e-1855.56Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
K0TR55_THAOC6.510e-1862.69Cyclin-dependent kinases regulatory subunit n=2 Ta... [more]
A0A7S3VGP8_9STRA1.430e-1754.67Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
A0A1E7F3Q6_9STRA3.870e-1757.35Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
A0A835YHQ2_9STRA5.340e-1756.72Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
D7G7T5_ECTSI6.760e-1753.73Cyclin-dependent kinases regulatory subunit n=2 Ta... [more]
A0A6S9ANL1_9STRA1.570e-1656.72Cyclin-dependent kinases regulatory subunit n=2 Ta... [more]
A0A7S0UH58_9STRA1.590e-1657.58Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
A0A7R9U1M9_9STRA2.610e-1657.35Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036858Cyclin-dependent kinase, regulatory subunit superfamilyGENE3D3.30.170.10coord: 1..59
e-value: 3.1E-11
score: 44.9
IPR036858Cyclin-dependent kinase, regulatory subunit superfamilySUPERFAMILY55637Cell cycle regulatory proteinscoord: 8..50
IPR000789Cyclin-dependent kinase, regulatory subunitPFAMPF01111CKScoord: 3..43
e-value: 6.5E-9
score: 35.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11589contigE-fasciculatus_F_contig11589:2206..2982 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11589.1267.1mRNA_E-fasciculatus_F_contig11589.1267.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig11589 2206..2982 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig11589.1267.1 ID=prot_E-fasciculatus_F_contig11589.1267.1|Name=mRNA_E-fasciculatus_F_contig11589.1267.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=75bp
ISQLPPAQLLSEAELESFGVFQDRGWVHYSILRRPNILLFRRPMGTDPVT
GAVDPVQQRMAQEGYRQQLNPDQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000789Cyclin-dep_kinase_reg-sub
IPR036858Cyclin-dep_kinase_reg-sub_sf