prot_E-fasciculatus_F_contig1104.838.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1104.838.1
Unique Nameprot_E-fasciculatus_F_contig1104.838.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length265
Homology
BLAST of mRNA_E-fasciculatus_F_contig1104.838.1 vs. uniprot
Match: A0A6H5KX12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX12_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 6.910e-18
Identity = 71/99 (71.72%), Postives = 81/99 (81.82%), Query Frame = 0
Query:   29 IADGQNATQLFVVDGGSRLHLSGMTLAHGSSASSGGAIHANQSSVSFSGSTSLISNHALRNXXXXXXXXXXXXXXGDGAQFSFNFANDSGGAIYATDSS 127
            +ADGQN TQLF VDGGSRLHLSGM +AHGS+A  GGAI A++S VSFSG+TS +SN A   XXXXXXXXXXXXXX DG +FS N A +SGGAI+A DSS
Sbjct:   86 VADGQNVTQLFYVDGGSRLHLSGMAIAHGSAAY-GGAIFASRSDVSFSGNTSFVSNSASXXXXXXXXXXXXXXXXXDGTKFSSNSAVESGGAIFAIDSS 183          
BLAST of mRNA_E-fasciculatus_F_contig1104.838.1 vs. uniprot
Match: A0A6H5JL43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL43_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 1.080e-15
Identity = 57/104 (54.81%), Postives = 67/104 (64.42%), Query Frame = 0
Query:   29 IADGQNATQLFVVDGGSRLHLSGMTLAHGSSASSGGAIHANQSSVSFSGSTSLISNHA------LRNXXXXXXXXXXXXXXGDGAQFSFNFANDSGGAIYATDS 126
            IADG  +TQLF VDGGS LHLS MTL++G++ S GGA+ ANQSSVSF G+TS  SN A      LRN              GDG +FS N+AN SGGAI A+ S
Sbjct:   61 IADGSGSTQLFAVDGGSNLHLSNMTLSNGNT-SFGGAVFANQSSVSFFGTTSFSSNSAYYGAPFLRNMEAINAYESTVSWDGDGTRFSSNYANGSGGAILASPS 163          
BLAST of mRNA_E-fasciculatus_F_contig1104.838.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 6.350e-10
Identity = 50/98 (51.02%), Postives = 56/98 (57.14%), Query Frame = 0
Query:   29 IADGQNATQLFVVDGGSRLHLSGMTLAHGSSASSGGAIHANQSSVSFSGSTSLISNHALRNXXXXXXXXXXXXXXGDGAQFSFNFANDSGGAIYATDS 126
            IADGQN TQLF VDGGS+L LS MTLAHG+ AS GGAI+  QS VSFSG+                              FS N+A+ SGGAIYAT S
Sbjct:   85 IADGQNITQLFYVDGGSKLRLSDMTLAHGN-ASEGGAIYVTQSIVSFSGNI----------------------------VFSSNYADTSGGAIYATSS 153          
BLAST of mRNA_E-fasciculatus_F_contig1104.838.1 vs. uniprot
Match: D7G1E0_ECTSI (EsV-1-12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E0_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 3.110e-8
Identity = 49/99 (49.49%), Postives = 57/99 (57.58%), Query Frame = 0
Query:   29 IADGQNATQLFVVDGGSRLHLSGMTLAHGSSASSGGAIHANQSSVSFSGSTSLISNHALRNXXXXXXXXXXXXXXGDGAQFSFNFANDSGGAIYATDSS 127
            IADG  +TQLFVV+GGS LHLS MTL++G+ A SGGAI A  SSVSFSG+TS                            F+ NFAN  GGAIYA  S+
Sbjct:  281 IADGGGSTQLFVVEGGSTLHLSDMTLSNGN-ALSGGAISAADSSVSFSGNTS----------------------------FNSNFANFYGGAIYANSST 350          
BLAST of mRNA_E-fasciculatus_F_contig1104.838.1 vs. uniprot
Match: D8LHW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHW0_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 1.910e-7
Identity = 42/81 (51.85%), Postives = 48/81 (59.26%), Query Frame = 0
Query:   29 IADGQNATQLFVVDGGSRLHLSGMTLAHGSSASSGGAIHANQSSVSFSGSTSLISNHALRNXXXXXXXXXXXXXXGDGAQF 109
            IADGQ+ T+LF VDGGS LHLS +TL +G   S GGAI+A QSSVSF G+ S ISN A                 GDG  F
Sbjct:   33 IADGQDTTRLFYVDGGSSLHLSDVTLLNGRY-SDGGAIYAEQSSVSFGGNVSFISNSASNFGGAIFTNSSTLSWDGDGTLF 112          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1104.838.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KX12_9PHAE6.910e-1871.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL43_9PHAE1.080e-1554.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J7J9_9PHAE6.350e-1051.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1E0_ECTSI3.110e-849.49EsV-1-12 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
D8LHW0_ECTSI1.910e-751.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 107..126
e-value: 3.4E-4
score: 18.3
coord: 76..97
e-value: 4.8E-4
score: 17.8
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 226..244
e-value: 0.028
score: 14.9
NoneNo IPR availablePANTHERPTHR19862FAMILY NOT NAMEDcoord: 40..244
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 29..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1104contigE-fasciculatus_F_contig1104:9096..9890 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1104.838.1mRNA_E-fasciculatus_F_contig1104.838.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1104 8938..9890 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1104.838.1 ID=prot_E-fasciculatus_F_contig1104.838.1|Name=mRNA_E-fasciculatus_F_contig1104.838.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=265bp
MGKSSSKKQSMSRVAQPSTSPELDQAPFIADGQNATQLFVVDGGSRLHLS
GMTLAHGSSASSGGAIHANQSSVSFSGSTSLISNHALRNGGAIYASGSNV
SWYGDGAQFSFNFANDSGGAIYATDSSTVSWDGDDTQFTSNSADIDGGAM
CVSYDSVVYWYGDGTQFISNSAVYSDGGAMRVSYDSVVYWYGDGTQFTSN
SAESDRGAMYVSSDSAVYWNGDDTHFTSNSALGDPGDGGGAIYAIDNSSV
SWDGDGTRFTSNNAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence
IPR003368POMP_repeat