prot_E-fasciculatus_F_contig10937.751.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10937.751.1
Unique Nameprot_E-fasciculatus_F_contig10937.751.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length93
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10937.751.1 vs. uniprot
Match: D8LMX2_ECTSI (Plectin isoform 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMX2_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 1.740e-28
Identity = 74/78 (94.87%), Postives = 75/78 (96.15%), Query Frame = 0 
Query:    1 RGRQAEAEALQLHDAAEKALEEVKQGARTTIEEMAARHSEELEAERKRVSEEEAVAREAALKAAGEESSQQQTKAVAN 78
            RGRQAE EALQL DAAEKALEEVKQGARTTIEEMAARHSEELEAERKRVS+EEAVAREAALKAAGEE SQQQTKAVAN
Sbjct: 1763 RGRQAEVEALQLQDAAEKALEEVKQGARTTIEEMAARHSEELEAERKRVSDEEAVAREAALKAAGEEFSQQQTKAVAN 1840
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10937.751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMX2_ECTSI1.740e-2894.87Plectin isoform 1 n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 32..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10937contigE-fasciculatus_F_contig10937:3071..4384 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10937.751.1mRNA_E-fasciculatus_F_contig10937.751.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10937 3071..4385 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10937.751.1 ID=prot_E-fasciculatus_F_contig10937.751.1|Name=mRNA_E-fasciculatus_F_contig10937.751.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=93bp
RGRQAEAEALQLHDAAEKALEEVKQGARTTIEEMAARHSEELEAERKRVS
EEEAVAREAALKAAGEESSQQQTKAVANARAAATAEARARAER
back to top