prot_E-fasciculatus_F_contig1093.745.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1093.745.1
Unique Nameprot_E-fasciculatus_F_contig1093.745.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length344
Homology
BLAST of mRNA_E-fasciculatus_F_contig1093.745.1 vs. uniprot
Match: A0A6H5KZG9_9PHAE (Protein-serine/threonine phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG9_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 5.400e-138
Identity = 272/323 (84.21%), Postives = 280/323 (86.69%), Query Frame = 0
Query:    1 MKRDRDGNQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNRPQQXXXXXXXXXXXXSSASRNGHVA-VSNGSSNRPPAAFAPATNAVGTASGTNGXXXXXXANVFTASSXXXXXXXXXXTPTSAATKRPKLGYERPDNWRATADEVLLKAGLERGSKEGRSRVLDEEGLSTRKGNDTKQXXXXXXXXXATKTVATTRSKRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMAGFDVVLCFETRVFYLVVE 322
            MKRDRDG+Q XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNRPQQXXXXXXXXXXXXSSASRNG VA VSNGSSN PPAAFAPAT AVGTAS  NG      ANVFTASS          TPTS+A KRPKLGYE PDNWRATADEVL+KAGLE G KEG+SR  DEEG STR+GND ++         ATKT+A  RSKRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMA FDVVLCFETRVFYLVVE
Sbjct:    1 MKRDRDGSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNRPQQXXXXXXXXXXXXSSASRNGQVAAVSNGSSNHPPAAFAPATAAVGTASRMNGAGDGGGANVFTASSYSERAPSSSSTPTSSAMKRPKLGYEHPDNWRATADEVLVKAGLEGGDKEGKSRAGDEEGSSTRRGNDKEKQQQPG----ATKTMAAARSKRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMADFDVVLCFETRVFYLVVE 319          
BLAST of mRNA_E-fasciculatus_F_contig1093.745.1 vs. uniprot
Match: D8LSD4_ECTSI (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSD4_ECTSI)

HSP 1 Score: 320 bits (820), Expect = 1.410e-106
Identity = 181/225 (80.44%), Postives = 183/225 (81.33%), Query Frame = 0
Query:  105 ANVFTASSXXXXXXXXXXTPTSAATKRPKLGYERPDNWRATADEVLLKAGLERGSKEGRSRVLDEEGLSTRKGNDTKQXXXXXXXXXATKTVATTRSKRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMAGFDVVLCFETRVFYLVVEGTYFSRT 329
            ANVFTASS          T TS+A KRPKLGYE PDNWRATADEVL+KAGLER  KE RSR  DEEG           XXXXXXXXX        RSKRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMA FDVVLCFETRVFYLVVEGT    T
Sbjct:   10 ANVFTASSSSARAPSSSSTATSSAMKRPKLGYEHPDNWRATADEVLVKAGLERVGKEERSRAGDEEGSXX----XXXXXXXXXXXXXXXXXXXXARSKRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMADFDVVLCFETRVFYLVVEGTCSPET 230          
BLAST of mRNA_E-fasciculatus_F_contig1093.745.1 vs. uniprot
Match: D8LTB5_ECTSI (Protein-serine/threonine phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTB5_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 2.260e-41
Identity = 76/123 (61.79%), Postives = 98/123 (79.67%), Query Frame = 0
Query:  201 SKRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMAGFDVVLCFETRVFYLVVEG 323
            S++ FAVVCS+N NRS+MA  LLKEH+ + +SYGTGREVRLPGKD  SP+ FPFGTPY +I D L  ++EALF +N++L L+ RNA  K AP+R+Q ++G  +A FDVV+CFE+RVF LVVEG
Sbjct:  140 SRKSFAVVCSSNVNRSIMAEILLKEHDIRAQSYGTGREVRLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERNATTKRAPERWQSLDGEHVASFDVVVCFESRVFDLVVEG 262          
BLAST of mRNA_E-fasciculatus_F_contig1093.745.1 vs. uniprot
Match: A0A2N9EIU2_FAGSY (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EIU2_FAGSY)

HSP 1 Score: 133 bits (334), Expect = 1.020e-34
Identity = 65/124 (52.42%), Postives = 83/124 (66.94%), Query Frame = 0
Query:  202 KRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMAGFDVVLCFETRVFYLVVEGTY 325
            K R+A+VCS+N NRSM AH LLK   F V SYGT   V+LPG  +  P V+ FGTPY+ +FD L+ KD  L+ +N +LP++ RN+ VK APQR+QE        FDVV  FE +VF +VVEG Y
Sbjct:    2 KFRYAMVCSSNQNRSMEAHSLLKRQGFDVSSYGTRAHVKLPGPSLREPNVYDFGTPYKQMFDDLRRKDPELYKRNGILPMLKRNSAVKLAPQRWQENAAD--GSFDVVFTFEEKVFDMVVEGWY 123          
BLAST of mRNA_E-fasciculatus_F_contig1093.745.1 vs. uniprot
Match: A0A251SE46_HELAN (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=5 Tax=Asteraceae TaxID=4210 RepID=A0A251SE46_HELAN)

HSP 1 Score: 134 bits (338), Expect = 1.390e-34
Identity = 69/136 (50.74%), Postives = 92/136 (67.65%), Query Frame = 0
Query:  204 RFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMAGFDVVLCFETRVFYLVVEGTYFSRTHEVCERYLGV 339
            R+A+VCS+N NRSM AH LLK   F V SYGTG  V+LPG  +  P V+ FGTPY+ +FD+L+ KD  L+ +N +LP++ RN  VK APQR+QE  GPD   FDVV  FE +VF +VVE  + +R H + +  L +
Sbjct:    4 RYAMVCSSNQNRSMEAHFLLKREGFDVCSYGTGTHVKLPGPSLREPNVYEFGTPYKQMFDELRRKDPELYKRNGILPMLKRNLAVKTAPQRWQE-NGPD-GHFDVVFTFEEKVFDMVVEDLH-TRDHVLLKPVLVI 136          
BLAST of mRNA_E-fasciculatus_F_contig1093.745.1 vs. uniprot
Match: A0A836ASG4_9ROSI (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836ASG4_9ROSI)

HSP 1 Score: 133 bits (334), Expect = 1.460e-34
Identity = 64/122 (52.46%), Postives = 84/122 (68.85%), Query Frame = 0
Query:  202 KRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMAGFDVVLCFETRVFYLVVEG 323
            K R+A+VCS+N NRSM AH LLK H F V SYGTG  V+LPG  +  P V+ FGTPY+ +FD L+ KD  L+ +N +LP++ RN+ VK APQR+Q+        F VVL FE +VF +V+EG
Sbjct:    2 KFRYAMVCSSNQNRSMEAHSLLKRHGFDVSSYGTGSHVKLPGPSLREPNVYDFGTPYKQMFDDLRRKDPELYKRNGILPMLKRNSGVKLAPQRWQDNAAD--GSFTVVLTFEEKVFDMVLEG 121          
BLAST of mRNA_E-fasciculatus_F_contig1093.745.1 vs. uniprot
Match: A0A7S0QYP3_9CHLO (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QYP3_9CHLO)

HSP 1 Score: 134 bits (336), Expect = 2.820e-34
Identity = 67/121 (55.37%), Postives = 86/121 (71.07%), Query Frame = 0
Query:  202 KRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMAGFDVVLCFETRVFYLVVE 322
            K+RFA+VC++N NRSM AH +LK +NFQV SYG G  V+LPG +  SP  +PFGTPY+ I+D LK KDE L+ +N LLP++ RN  VK AP+R+Q+    +   FDVVL FE  VF  VVE
Sbjct:    5 KKRFAMVCASNQNRSMEAHCMLKNNNFQVSSYGVGAHVKLPGPNQKSPNTYPFGTPYQYIYDDLKKKDEELYIRNGLLPMLERNITVKTAPERWQD----NRDQFDVVLTFEESVFEKVVE 121          
BLAST of mRNA_E-fasciculatus_F_contig1093.745.1 vs. uniprot
Match: UPI0010A4EFFF (RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A4EFFF)

HSP 1 Score: 131 bits (329), Expect = 3.660e-34
Identity = 64/125 (51.20%), Postives = 86/125 (68.80%), Query Frame = 0
Query:  202 KRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQE--IEGPDMAGFDVVLCFETRVFYLVVEGT 324
            K R+AVVCS+N NRSM AH LLK   F V SYGTG  V+LPG+ +  P V+ FGTPY+ + D L+ KD+ L+ +N +LP++ RN+ VK APQR+Q+   EG     FD+V  FE +VF +V EG+
Sbjct:    2 KFRYAVVCSSNQNRSMEAHSLLKRQGFDVCSYGTGAHVKLPGRSLREPNVYDFGTPYKQMLDDLRRKDQELYKRNGILPMLKRNSTVKLAPQRWQDNAAEG----SFDIVFTFEEKVFDMVAEGS 122          
BLAST of mRNA_E-fasciculatus_F_contig1093.745.1 vs. uniprot
Match: A0A4S4E2H4_CAMSI (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=4 Tax=asterids TaxID=71274 RepID=A0A4S4E2H4_CAMSI)

HSP 1 Score: 133 bits (335), Expect = 4.070e-34
Identity = 66/138 (47.83%), Postives = 91/138 (65.94%), Query Frame = 0
Query:  202 KRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMAGFDVVLCFETRVFYLVVEGTYFSRTHEVCERYLGV 339
            K R+A+VCS+N NRSM AH LLK   F+V SYGTG  V+LPG  +  P V+ FGTPY+ +FD L+ KD  L+ +N +LP++ RN+ VK APQR+Q+        FDVV  FE +VF +V+E  + SR H + +  L +
Sbjct:    3 KLRYAMVCSSNQNRSMEAHSLLKREGFEVSSYGTGSHVKLPGPSLREPNVYDFGTPYKQMFDDLRRKDPELYKRNGILPMLKRNSAVKLAPQRWQDNAADGY--FDVVFTFEEKVFDMVIEDLH-SRDHVLMKPVLVI 137          
BLAST of mRNA_E-fasciculatus_F_contig1093.745.1 vs. uniprot
Match: UPI00053FFF3D (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FFF3D)

HSP 1 Score: 133 bits (334), Expect = 5.400e-34
Identity = 63/124 (50.81%), Postives = 88/124 (70.97%), Query Frame = 0
Query:  202 KRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMAGFDVVLCFETRVFYLVVEGTY 325
            K R+A+VCS+N NRSM AH ++K+  F V SYGTG  V+LPG  I+ P V+ FGTPY+ +FD+L+ KD  L+ +N +LP++ RN+ VK APQR+Q+     +  FDVV+ FE +VF +VVE  Y
Sbjct:    2 KLRYAMVCSSNQNRSMEAHFIMKKQGFDVSSYGTGAHVKLPGPSISKPNVYEFGTPYKQMFDELRRKDPELYKRNGILPMLKRNSSVKLAPQRWQDNAHDGV--FDVVITFEEKVFDMVVEDLY 123          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1093.745.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZG9_9PHAE5.400e-13884.21Protein-serine/threonine phosphatase n=1 Tax=Ectoc... [more]
D8LSD4_ECTSI1.410e-10680.44RNA polymerase II subunit A C-terminal domain phos... [more]
D8LTB5_ECTSI2.260e-4161.79Protein-serine/threonine phosphatase n=1 Tax=Ectoc... [more]
A0A2N9EIU2_FAGSY1.020e-3452.42RNA polymerase II subunit A C-terminal domain phos... [more]
A0A251SE46_HELAN1.390e-3450.74RNA polymerase II subunit A C-terminal domain phos... [more]
A0A836ASG4_9ROSI1.460e-3452.46RNA polymerase II subunit A C-terminal domain phos... [more]
A0A7S0QYP3_9CHLO2.820e-3455.37RNA polymerase II subunit A C-terminal domain phos... [more]
UPI0010A4EFFF3.660e-3451.20RNA polymerase II subunit A C-terminal domain phos... [more]
A0A4S4E2H4_CAMSI4.070e-3447.83RNA polymerase II subunit A C-terminal domain phos... [more]
UPI00053FFF3D5.400e-3450.81RNA polymerase II subunit A C-terminal domain phos... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2300coord: 203..279
e-value: 1.0E-12
score: 50.2
NoneNo IPR availablePANTHERPTHR20383:SF9RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASE SSU72coord: 202..323
IPR006811RNA polymerase II subunit APFAMPF04722Ssu72coord: 204..324
e-value: 8.5E-43
score: 146.1
IPR006811RNA polymerase II subunit APANTHERPTHR20383FAMILY NOT NAMEDcoord: 202..323

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1093contigE-fasciculatus_F_contig1093:16146..17652 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1093.745.1mRNA_E-fasciculatus_F_contig1093.745.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1093 13433..19896 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1093.745.1 ID=prot_E-fasciculatus_F_contig1093.745.1|Name=mRNA_E-fasciculatus_F_contig1093.745.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=344bp
MKRDRDGNQHQHHYEDQHQWHQHQQYQQHQQEEEEIPPPPPPRNRPQQEI
PPPPPPRIRPSSASRNGHVAVSNGSSNRPPAAFAPATNAVGTASGTNGGG
DGGGANVFTASSSSARAPSSSSTPTSAATKRPKLGYERPDNWRATADEVL
LKAGLERGSKEGRSRVLDEEGLSTRKGNDTKQQQQQHQQQGATKTVATTR
SKRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPE
VFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEG
PDMAGFDVVLCFETRVFYLVVEGTYFSRTHEVCERYLGVPMPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006811RNA_pol_II_suA