prot_E-fasciculatus_F_contig10591.473.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10591.473.1
Unique Nameprot_E-fasciculatus_F_contig10591.473.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length189
Homology
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BLAST of mRNA_E-fasciculatus_F_contig10591.473.1 vs. uniprot
Match: D8LSB8_ECTSI (PNPLA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSB8_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 4.870e-45
Identity = 88/95 (92.63%), Postives = 91/95 (95.79%), Query Frame = 0 
Query:   86 MEEVARVIGEVADGVLKHVSDRMPGLEAFTLEILDTIFAPRLVLRHLMVAVALQTGLLTYNGLVMVANRLLSRMSTRHGEAKAYRHKMRNAKNYE 180
            ME V R+IGEVAD VLKHVSDRMPGLEAFTLEILDTIFAPRLVLRHLMVAVALQTGLLTYNGLV+VANRLLSR+STRHGEAKAYRHKMR AKNYE
Sbjct:    1 MERVGRMIGEVADAVLKHVSDRMPGLEAFTLEILDTIFAPRLVLRHLMVAVALQTGLLTYNGLVVVANRLLSRLSTRHGEAKAYRHKMRTAKNYE 95
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BLAST of mRNA_E-fasciculatus_F_contig10591.473.1 vs. uniprot
Match: A0A835ZEF1_9STRA (Acyl transferase/acyl hydrolase/lysophospholipase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEF1_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 4.010e-14
Identity = 41/96 (42.71%), Postives = 65/96 (67.71%), Query Frame = 0 
Query:   85 KMEEVARVIGEVADGVLKHVSDRMPGLEAFTLEILDTIFAPRLVLRHLMVAVALQTGLLTYNGLVMVANRLLSRMSTRHGEAKAYRHKMRNAKNYE 180
            ++ E  R++ ++AD  L+ +S++ PG+EA+ LE L+TIFAPRL+LRHL+ A+ALQ GL+T+N        ++ RM+ +H   K     +R A+NYE
Sbjct:   20 RLSEYLRLLEQLADKALQLLSEKAPGIEAWLLEALETIFAPRLLLRHLVAAMALQAGLITWNMATAAYGHMMGRMNRKHRALKEAHAALRLAQNYE 115
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10591.473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSB8_ECTSI4.870e-4592.63PNPLA domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835ZEF1_9STRA4.010e-1442.71Acyl transferase/acyl hydrolase/lysophospholipase ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..52
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 53..131
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..152
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 153..188
NoneNo IPR availableTMHMMTMhelixcoord: 127..149
NoneNo IPR availableTMHMMTMhelixcoord: 29..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10591contigE-fasciculatus_F_contig10591:1137..3706 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10591.473.1mRNA_E-fasciculatus_F_contig10591.473.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10591 1076..4125 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10591.473.1 ID=prot_E-fasciculatus_F_contig10591.473.1|Name=mRNA_E-fasciculatus_F_contig10591.473.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=189bp
MKGEPPSRCPPDRGGDGGHRSVDRGSSSLLSGVAVLAGVAVSGVSAAAAA
AASSRSEGGGGGVSRRAGPAAAAAVVASEEVATAKMEEVARVIGEVADGV
LKHVSDRMPGLEAFTLEILDTIFAPRLVLRHLMVAVALQTGLLTYNGLVM
VANRLLSRMSTRHGEAKAYRHKMRNAKNYEVRDVTVLS*
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