prot_E-fasciculatus_F_contig10589.469.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10589.469.1
Unique Nameprot_E-fasciculatus_F_contig10589.469.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length264
Homology
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BLAST of mRNA_E-fasciculatus_F_contig10589.469.1 vs. uniprot
Match: A0A6H5JMF4_9PHAE (Vps8 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF4_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 1.380e-74
Identity = 159/203 (78.33%), Postives = 162/203 (79.80%), Query Frame = 0 
Query:   63 SNVSPSRELERWRGDGXXXXXXXXXATLPPAASRGSGTAATAAGGLLSPRSFGGDDXXXXXXXXPESVSYSDPYSXXXXXXXXXSTYGDGN-GSLSGAPPRTAFLSRDEVSEDSRLLQQILRESEEEIAASAADRANGFGXXXXXXXXXXGAMTRLVSSVGGAGNDLYGAADDNLQSLDVDKIIESMELEAGEDDDVTGSRAG 264
            SNVSPSRELERWR DG         A LPP AS+GS TAA AAGGLLSPRSFGG+D         ESV YSDPYS         STYGDGN GSLSGAPPRTAFLSRDEVSEDSRLLQQILRESEEEIAAS ADRANGFG  XXXXXXXX AMTRLVSSVGGAG+DLYGAADDNLQSLDVDKIIESMELEAGEDDDVTG   G
Sbjct:    2 SNVSPSRELERWRDDGGGGRGAGTSANLPPVASQGSATAA-AAGGLLSPRSFGGEDTSTKGGRGAESVGYSDPYSGGGGS----STYGDGNNGSLSGAPPRTAFLSRDEVSEDSRLLQQILRESEEEIAASVADRANGFGAGXXXXXXXXXAMTRLVSSVGGAGSDLYGAADDNLQSLDVDKIIESMELEAGEDDDVTGRAGG 199
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10589.469.1 vs. uniprot
Match: D8LRX0_ECTSI (Vps8 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX0_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 4.570e-63
Identity = 157/204 (76.96%), Postives = 159/204 (77.94%), Query Frame = 0 
Query:   64 NVSPSRELERWRGDGXXXXXXXXXATLPPAASRGSGTAATAAGGLLSPRSFGGDDXXXXXXXXPESVSYSDPYSXXXXXXXXXSTYGDGN-GSLSGAPPRTAFLSRDEVSEDSRLLQQILRESEEEIAASAADRANGFGXXXXXXXXXXG--AMTRLVSSVGGAGNDLYGAADDNLQSLDVDKIIESMELEAGEDDDVTGSRAG 264
            NVSPSRELERWRGDG         A L P ASRGS TAA AAGGLLSPRSFGG+D         ESV YSD YS XXXXXXX   YGDGN GSLSGAPPRTAFLSRDEVSEDSRLLQQILRESEEEIAAS         XXXXXXXXXX   AMTRLVSSVGGAG+DLYGAADDNLQSLDVDKIIESMELEAGEDDDVTG   G
Sbjct:   10 NVSPSRELERWRGDGGGGRGAGTSANLLPVASRGSATAA-AAGGLLSPRSFGGEDTSTKRGGGAESVGYSDAYSGXXXXXXX---YGDGNNGSLSGAPPRTAFLSRDEVSEDSRLLQQILRESEEEIAASXXXXXXXXXXXXXXXXXXXXXXAMTRLVSSVGGAGSDLYGAADDNLQSLDVDKIIESMELEAGEDDDVTGRAGG 209
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10589.469.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JMF4_9PHAE1.380e-7478.33Vps8 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LRX0_ECTSI4.570e-6376.96Vps8 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 168..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10589contigE-fasciculatus_F_contig10589:2456..4090 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10589.469.1mRNA_E-fasciculatus_F_contig10589.469.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10589 2232..4090 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10589.469.1 ID=prot_E-fasciculatus_F_contig10589.469.1|Name=mRNA_E-fasciculatus_F_contig10589.469.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=264bp
MDQDVEAILNAPDSDDDDGLNVQGVSLEDILREDDGGYYHDEDDLVVGHR
GDEAENPPHLLGSNVSPSRELERWRGDGGGGRGAGASATLPPAASRGSGT
AATAAGGLLSPRSFGGDDASAKGGGGPESVSYSDPYSGGGGGGGGSSTYG
DGNGSLSGAPPRTAFLSRDEVSEDSRLLQQILRESEEEIAASAADRANGF
GAGGGGGSGSGGAMTRLVSSVGGAGNDLYGAADDNLQSLDVDKIIESMEL
EAGEDDDVTGSRAG
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