prot_E-fasciculatus_F_contig10584.465.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10584.465.1
Unique Nameprot_E-fasciculatus_F_contig10584.465.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length81
Homology
BLAST of mRNA_E-fasciculatus_F_contig10584.465.1 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 3.720e-43
Identity = 72/81 (88.89%), Postives = 78/81 (96.30%), Query Frame = 0
Query:    1 MNVKFMMDRSMRQDVAFLRWPIPRLVCVLPAPESGAKPLEEKDRSFEEWSATLRTWCLGGKRKGKWAATQKLRLFFLCPYD 81
            MNVKFMMDRS++QD+AFLRWPIPRLVCVLPAPESGAKPLEEKDRSF++WSATLR WCLGGKRKGK  AT+KLRLFFLCPYD
Sbjct:  721 MNVKFMMDRSIKQDLAFLRWPIPRLVCVLPAPESGAKPLEEKDRSFDKWSATLRNWCLGGKRKGKGVATRKLRLFFLCPYD 801          
BLAST of mRNA_E-fasciculatus_F_contig10584.465.1 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 6.100e-42
Identity = 72/81 (88.89%), Postives = 75/81 (92.59%), Query Frame = 0
Query:    1 MNVKFMMDRSMRQDVAFLRWPIPRLVCVLPAPESGAKPLEEKDRSFEEWSATLRTWCLGGKRKGKWAATQKLRLFFLCPYD 81
            MNVK MMDRSMRQDVAFLRWPIPRLVCVLPAPESGAKPLEE DRSFE+WSATLR WCLGGKR GK  AT+KLR+FFLCPYD
Sbjct:  710 MNVKLMMDRSMRQDVAFLRWPIPRLVCVLPAPESGAKPLEEGDRSFEQWSATLRNWCLGGKRTGKGFATRKLRMFFLCPYD 790          
BLAST of mRNA_E-fasciculatus_F_contig10584.465.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 4.020e-41
Identity = 71/81 (87.65%), Postives = 75/81 (92.59%), Query Frame = 0
Query:    1 MNVKFMMDRSMRQDVAFLRWPIPRLVCVLPAPESGAKPLEEKDRSFEEWSATLRTWCLGGKRKGKWAATQKLRLFFLCPYD 81
            MNVKFMMDRSMRQDVAFLRWPIPRLVCVLPAPES AKPLEEKDRSFE+WSATLR WC+ GKR GK  AT+KLR+FFLCPYD
Sbjct:  997 MNVKFMMDRSMRQDVAFLRWPIPRLVCVLPAPESRAKPLEEKDRSFEQWSATLRNWCVDGKRTGKGFATRKLRVFFLCPYD 1077          
BLAST of mRNA_E-fasciculatus_F_contig10584.465.1 vs. uniprot
Match: A0A6H5JXU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU4_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 2.900e-36
Identity = 63/76 (82.89%), Postives = 69/76 (90.79%), Query Frame = 0
Query:    2 NVKFMMDRSMRQDVAFLRWPIPRLVCVLPAPESGAKPLEEKDRSFEEWSATLRTWCLGGKRKGKWAATQKLRLFFL 77
             VKFM DRS+RQD AFL+WPIPRL+C+LPAP+SGAKPLEEKD SFEEWSATLR WCLGGKRKGK  AT+KLRLFFL
Sbjct:  277 GVKFMTDRSIRQDAAFLQWPIPRLLCLLPAPKSGAKPLEEKDGSFEEWSATLRKWCLGGKRKGKGVATRKLRLFFL 352          
BLAST of mRNA_E-fasciculatus_F_contig10584.465.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 4.090e-24
Identity = 48/72 (66.67%), Postives = 57/72 (79.17%), Query Frame = 0
Query:   10 SMRQDVAFLRWPIPRLVCVLPAPESGAKPLEEKDRSFEEWSATLRTWCLGGKRKGKWAATQKLRLFFLCPYD 81
            S+ ++VAFL WPIP L+CVLPA ESGAKPL+E+DRSFEEWS  L+  C  G + G+  ATQKLRLFFLCP D
Sbjct:  874 SLARNVAFLLWPIPSLMCVLPARESGAKPLDERDRSFEEWSTVLQKRCSEGNKMGRGVATQKLRLFFLCPLD 945          
BLAST of mRNA_E-fasciculatus_F_contig10584.465.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 5.460e-11
Identity = 39/88 (44.32%), Postives = 49/88 (55.68%), Query Frame = 0
Query:   13 QDVAFLRWPIPRLVCVLPAPESGAKPLEEKDRSFEEWSATLRTWC------------------LG-GKRKGKWAATQKLRLFFLCPYD 81
            ++VA LRWPIPR VCVLPA ++    L E DRSFE+WS  L+ WC                  LG  K + +   T++LRLFFLC  D
Sbjct:  881 REVAILRWPIPRFVCVLPARDTR---LSESDRSFEKWSTALKEWCASKSPAKDAKNPNRKTSILGLNKPQLRGLVTRELRLFFLCGQD 965          
BLAST of mRNA_E-fasciculatus_F_contig10584.465.1 vs. uniprot
Match: A0A6H5JXK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK6_9PHAE)

HSP 1 Score: 49.7 bits (117), Expect = 4.850e-5
Identity = 29/67 (43.28%), Postives = 38/67 (56.72%), Query Frame = 0
Query:   10 SMRQDVAFLRWPIPRLVCVLPAPESGAKPLEEKDRSFEEWSATLRTWCLGGKRKGKWAATQKLRLFF 76
            S+ Q+VAF+RWPIPRLV +L AP+SG   L  + R                + KG+   T+KLRLFF
Sbjct:  225 SIAQNVAFMRWPIPRLVWLLLAPDSGEPALTAEQRC--------------NQAKGRRLVTRKLRLFF 277          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10584.465.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5K9A9_9PHAE3.720e-4388.89Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L2L4_9PHAE6.100e-4288.89Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FU35_ECTSI4.020e-4187.65LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JXU4_9PHAE2.900e-3682.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLG1_ECTSI4.090e-2466.67LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUH6_ECTSI5.460e-1144.32LRR-GTPase of the ROCO family, incomplete sequence... [more]
A0A6H5JXK6_9PHAE4.850e-543.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10584contigE-fasciculatus_F_contig10584:676..1179 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10584.465.1mRNA_E-fasciculatus_F_contig10584.465.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10584 668..1179 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10584.465.1 ID=prot_E-fasciculatus_F_contig10584.465.1|Name=mRNA_E-fasciculatus_F_contig10584.465.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=81bp
MNVKFMMDRSMRQDVAFLRWPIPRLVCVLPAPESGAKPLEEKDRSFEEWS
ATLRTWCLGGKRKGKWAATQKLRLFFLCPYD
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