prot_E-fasciculatus_F_contig102.190.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig102.190.1
Unique Nameprot_E-fasciculatus_F_contig102.190.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length80
Homology
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BLAST of mRNA_E-fasciculatus_F_contig102.190.1 vs. uniprot
Match: D7FKT0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT0_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 7.360e-12
Identity = 49/87 (56.32%), Postives = 58/87 (66.67%), Query Frame = 0 
Query:    1 DSRSASPLLHHRIRIAMARAMPRTRAMKTTSHTANFDL------YREWAERQQLESELESAYKSKMAVYEVAFV---LGMALGVAML 78
            DSR AS LLHHRI IA  RA+PRT AM      A + L       R+ AE Q+LES+LESAYKSKMAV+ + F+   LGM LG+AML
Sbjct:    3 DSRPASRLLHHRISIA--RAVPRTNAMNLL---AFYQLPESRWATRKLAEPQKLESDLESAYKSKMAVWGIIFMSSALGMVLGMAML 84
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BLAST of mRNA_E-fasciculatus_F_contig102.190.1 vs. uniprot
Match: D7FHM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM7_ECTSI)

HSP 1 Score: 46.6 bits (109), Expect = 7.110e-5
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 0 
Query:   33 TANFDLYREWAERQQLESELESAYKSKMAVYEVAFV---LGMALGVAML 78
            TA+    R+ AERQ+LESELESAYKS MAV+ V F+   LGMAL +AML
Sbjct:   33 TASRRTARQLAERQKLESELESAYKSTMAVWGVIFMASDLGMALVMAML 81
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig102.190.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKT0_ECTSI7.360e-1256.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHM7_ECTSI7.110e-563.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..78
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 79..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig102contigE-fasciculatus_F_contig102:22661..23647 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig102.190.1mRNA_E-fasciculatus_F_contig102.190.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig102 22609..23647 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig102.190.1 ID=prot_E-fasciculatus_F_contig102.190.1|Name=mRNA_E-fasciculatus_F_contig102.190.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=80bp
DSRSASPLLHHRIRIAMARAMPRTRAMKTTSHTANFDLYREWAERQQLES
ELESAYKSKMAVYEVAFVLGMALGVAMLE*
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