prot_E-fasciculatus_F_contig10032.47.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10032.47.1
Unique Nameprot_E-fasciculatus_F_contig10032.47.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length94
Homology
BLAST of mRNA_E-fasciculatus_F_contig10032.47.1 vs. uniprot
Match: A0A6H5L316_9PHAE (SHSP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L316_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 1.070e-43
Identity = 82/88 (93.18%), Postives = 86/88 (97.73%), Query Frame = 0
Query:    3 ETDDLYTLAFDLPAGVDHDGLEVSISGRLLTVKASITREQEADPFTSRGGWVTRSSRVDSVSRSFVLPEGLVESSATASLAEGKAEVR 90
            ET+DLYTLAFDLPAGVDHDGLEVS+S RLLTVKASITREQEADPF +RGGWVTRSSRVDSVSRSFVLPEGLVESSATASL+EGKAEVR
Sbjct:  127 ETNDLYTLAFDLPAGVDHDGLEVSVSDRLLTVKASITREQEADPFITRGGWVTRSSRVDSVSRSFVLPEGLVESSATASLSEGKAEVR 214          
BLAST of mRNA_E-fasciculatus_F_contig10032.47.1 vs. uniprot
Match: D8LP10_ECTSI (SHSP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP10_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 1.120e-43
Identity = 82/88 (93.18%), Postives = 85/88 (96.59%), Query Frame = 0
Query:    3 ETDDLYTLAFDLPAGVDHDGLEVSISGRLLTVKASITREQEADPFTSRGGWVTRSSRVDSVSRSFVLPEGLVESSATASLAEGKAEVR 90
            ETDDLY LAFDLPAGVDHDGL+VS+S RLLTVKASITREQEADPFT+RGGWVTRSSRVDSVSRSFVLPEGLVESSATASLAE KAEVR
Sbjct:  123 ETDDLYALAFDLPAGVDHDGLDVSVSDRLLTVKASITREQEADPFTTRGGWVTRSSRVDSVSRSFVLPEGLVESSATASLAESKAEVR 210          
BLAST of mRNA_E-fasciculatus_F_contig10032.47.1 vs. uniprot
Match: D7FTP7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTP7_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 6.710e-9
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 0
Query:    1 MQETDDLYTLAFDLPAGVDHDGLEVSISGRLLTVKASITREQEADPFT------SRG--GWV-TR-SSRVDSVSRSFVLPEGL 73
            ++ETD  Y L F+LP+G+   GLEVS+SGRLLTV+A  TRE+  D  +      S G  GWV TR +++ ++ +RSF LP+ +
Sbjct:  111 VRETDAGYALTFNLPSGISDTGLEVSVSGRLLTVEARTTREENHDVISKSADKGSEGSKGWVMTRCTTKTNAAARSFTLPDSV 193          
BLAST of mRNA_E-fasciculatus_F_contig10032.47.1 vs. uniprot
Match: E4NTY4_HALBP (Heat shock protein Hsp20 n=2 Tax=Halogeometricum borinquense TaxID=60847 RepID=E4NTY4_HALBP)

HSP 1 Score: 53.9 bits (128), Expect = 5.120e-7
Identity = 35/85 (41.18%), Postives = 50/85 (58.82%), Query Frame = 0
Query:    1 MQETDDLYTLAFDLPAGVDHDGLEVSISGRLLTVKASITREQEADPFTSRGGWVTRSSRVDSVSRSFVLPEGLVESSATASLAEG 85
            + ETDD +T+  DLP G + D +E+S SGR LT++A    EQ A+   S   +V R  R  +V RS  LP+ +VE  A+A+   G
Sbjct:   36 VSETDDEFTVVADLP-GYEKDDIEISASGRELTIRA----EQTAETEESGDRYVRRERRQSNVRRSLTLPQEVVEEEASATYKNG 115          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10032.47.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L316_9PHAE1.070e-4393.18SHSP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LP10_ECTSI1.120e-4393.18SHSP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FTP7_ECTSI6.710e-945.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
E4NTY4_HALBP5.120e-741.18Heat shock protein Hsp20 n=2 Tax=Halogeometricum b... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 2..87
e-value: 1.5E-6
score: 28.2
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 1..94
score: 11.721
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 1..93
e-value: 4.6E-12
score: 47.8
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 2..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10032contigE-fasciculatus_F_contig10032:4447..4728 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10032.47.1mRNA_E-fasciculatus_F_contig10032.47.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10032 4438..4728 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10032.47.1 ID=prot_E-fasciculatus_F_contig10032.47.1|Name=mRNA_E-fasciculatus_F_contig10032.47.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=94bp
MQETDDLYTLAFDLPAGVDHDGLEVSISGRLLTVKASITREQEADPFTSR
GGWVTRSSRVDSVSRSFVLPEGLVESSATASLAEGKAEVRPVKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR002068A-crystallin/Hsp20_dom