mRNA_D-mesarthrocarpus_Contig10390.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10390.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10390.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10390.1.1 vs. uniprot
Match: W4GWE0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GWE0_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.450e-24
Identity = 57/124 (45.97%), Postives = 82/124 (66.13%), Query Frame = 1
Query:  424 YVMRDGRGIYLHPEEDAPGPPRAQNKRFITKVIFLAAVARPRIISDGV-WFDGKIGIWPIADTVAAMRSIKNHKKGTMMLKPATINAERYKELMIDQVIPAIKARMPRPPGHTIFVQQD-AKPH 789
            +  +  + +YL P E+ P     ++KR+ITKV+FL+AVARPR + D V WFDGKIG W   + V A RS +N   GT++ KP ++  + Y++++ID VIPAIKA+ PR     I +QQD A+PH
Sbjct:  121 FATKISKKMYLAPGEEPPHR-TCKSKRYITKVMFLSAVARPRWVDDEVGWFDGKIGTWHFTERVPAERSSRNRAAGTLVTKPVSVTQDIYRKMLIDNVIPAIKAKWPRNSSRCITIQQDNARPH 243          
BLAST of mRNA_D-mesarthrocarpus_Contig10390.1.1 vs. uniprot
Match: W4GP40_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GP40_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.100e-24
Identity = 58/124 (46.77%), Postives = 79/124 (63.71%), Query Frame = 1
Query:  424 YVMRDGRGIYLHPEEDAPGPPRAQNKRFITKVIFLAAVARPRI-ISDGVWFDGKIGIWPIADTVAAMRSIKNHKKGTMMLKPATINAERYKELMIDQVIPAIKARMPRPPGHTIFVQQD-AKPH 789
            Y+ R  + +YL P E+ P     ++KRFITKV+FL+AVARPR   +   WFDG+IG W    TV A RS +N   GTM+  P T+  + Y++++ID VIPAIKA+ P      I +QQD A+PH
Sbjct:   97 YMTRVKKTLYLLPGEEPPHR-STKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQTVPAQRSSRNRPSGTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWPNDKAARILLQQDNARPH 219          
BLAST of mRNA_D-mesarthrocarpus_Contig10390.1.1 vs. uniprot
Match: W4GHD6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GHD6_9STRA)

HSP 1 Score: 108 bits (269), Expect = 5.350e-24
Identity = 59/127 (46.46%), Postives = 82/127 (64.57%), Query Frame = 1
Query:  424 YVMRDGRGIYLHPEEDAPGPPRAQNKRFITKVIFLAAVARPRI-ISDGVWFDGKIGIWPIADTVAAMRSIKNHKKGTMMLKPATINAERYKELMIDQVIPAIKARMPRP-PGHTIFVQQD-AKPHTG 795
            ++ +  R  Y + +E  P   R ++KRFITKV+FLAAVARPR        FDGKIGIWP    + A R+ KN  KGTM+  P ++ ++ Y+ +++D V+PAIK +MPR   G TI++QQD A PH G
Sbjct:  180 FLTKVKRKFYAYSDEVVPAS-RVKSKRFITKVMFLAAVARPRYDFQKKSMFDGKIGIWPFVVQLPAQRNSKNRVKGTMLTVPQSVTSDVYRAMILDNVVPAIKEKMPRNGQGGTIYMQQDNASPHNG 305          
BLAST of mRNA_D-mesarthrocarpus_Contig10390.1.1 vs. uniprot
Match: A0A6A4YXI9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YXI9_9STRA)

HSP 1 Score: 108 bits (269), Expect = 3.350e-23
Identity = 56/124 (45.16%), Postives = 79/124 (63.71%), Query Frame = 1
Query:  424 YVMRDGRGIYLHPEEDAPGPPRAQNKRFITKVIFLAAVARPRIISD-GVWFDGKIGIWPIADTVAAMRSIKNHKKGTMMLKPATINAERYKELMIDQVIPAIKARMPRPPGHTIFVQQD-AKPH 789
            +  R  +  YL P E AP     ++KRFI+KV+FL+AVARPR+  D G WFDGKIG W   + VAA R+ +N   GT+  +P ++    YK ++ID+VIP IK++ P   G  + +QQD A+PH
Sbjct:  187 FATRVSKRYYLAPGE-APPHRTCKSKRFISKVMFLSAVARPRLNDDTGEWFDGKIGTWHFTEKVAAARTSRNRPAGTLETQPVSVTRPVYKAMLIDKVIPTIKSKWPSSAGRNVIIQQDNARPH 309          
BLAST of mRNA_D-mesarthrocarpus_Contig10390.1.1 vs. uniprot
Match: A0A6A4ZIA5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZIA5_9STRA)

HSP 1 Score: 107 bits (266), Expect = 7.090e-23
Identity = 53/123 (43.09%), Postives = 82/123 (66.67%), Query Frame = 1
Query:  424 YVMRDGRGIYLHPEEDAPGPPRAQNKRFITKVIFLAAVARPRIISDGVWFDGKIGIWPIADTVAAMRSIKNHKKGTMMLKPATINAERYKELMIDQVIPAIKARMPRPPGHTIFVQQD-AKPH 789
            Y+ R  +  Y++ E++       ++KRFITKV+FLAA+ARPR+  DG  FDGKIG+WP  + + A R+ KN  KGTM+  P +++A+ Y  ++++ V+PAIK++ P  P   + +QQD A PH
Sbjct:  196 YLTRVKKKFYVY-EDEVVAARFVKSKRFITKVMFLAAIARPRVELDGTIFDGKIGVWPFVEKMPARRNSKNRAKGTMITTPQSVDAKVYLNMVLNNVVPAIKSKFP--PQSGVIIQQDNASPH 315          
BLAST of mRNA_D-mesarthrocarpus_Contig10390.1.1 vs. uniprot
Match: A0A6A4Z7D1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z7D1_9STRA)

HSP 1 Score: 107 bits (266), Expect = 7.300e-23
Identity = 55/124 (44.35%), Postives = 85/124 (68.55%), Query Frame = 1
Query:  424 YVMRDGRGIYLHPEEDAPGPPRAQNKRFITKVIFLAAVARPRIISDGVWFDGKIGIWPIADTVAAMRSIKNHKKGTMMLKPATINAERYKELMIDQVIPAIKARMPRPPGHT-IFVQQD-AKPH 789
            Y+ +  R  Y++ E++A      ++KRFITKV+FLAA+ARPR+  +G  FDGKIG+WP  + + A R+ KN  KGT++  P +++A+ Y E++++ V+PAIKA+ PR    T + +QQD A PH
Sbjct:  196 YLTKVKRKFYVY-EDEAVAARFVKSKRFITKVMFLAAIARPRVDFNGNIFDGKIGVWPFVEKLPAKRNSKNRAKGTIVTTPQSVDAKVYLEMVLNNVVPAIKAKFPRSTLRTGVTIQQDNASPH 318          
BLAST of mRNA_D-mesarthrocarpus_Contig10390.1.1 vs. uniprot
Match: A0A485LTD1_9STRA (Aste57867_25464 protein n=4 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LTD1_9STRA)

HSP 1 Score: 105 bits (261), Expect = 9.360e-23
Identity = 55/119 (46.22%), Postives = 77/119 (64.71%), Query Frame = 1
Query:  424 YVMRDGRGIYLHPEEDAPGPPRAQNKRFITKVIFLAAVARPRIISD-GVWFDGKIGIWPIADTVAAMRSIKNHKKGTMMLKPATINAERYKELMIDQVIPAIKARMPRPPGHTIFVQQD 777
            Y+ +  R  YL P E  P   + ++KRFITKV+FL+AVARPR I D G+W+DGKIG WP  ++V A R+  N   GT   KP T+  + Y+E +ID+V+PAI A+ P+    T+ +Q D
Sbjct:  177 YLSKATRTFYLVPGEREPER-KCKSKRFITKVMFLSAVARPRYIHDTGLWWDGKIGTWPFVESVTAQRASVNRPAGTYETKPITVTKDVYREFIIDKVLPAIAAKWPKI-DRTVLLQHD 293          
BLAST of mRNA_D-mesarthrocarpus_Contig10390.1.1 vs. uniprot
Match: A0A6A5A6A6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A6A6_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.460e-22
Identity = 55/125 (44.00%), Postives = 84/125 (67.20%), Query Frame = 1
Query:  424 YVMRDGRGIYLHPEEDAPGPPRAQNKRFITKVIFLAAVARPRIISD-GVWFDGKIGIWPIADTVAAMRSIKNHKKGTMMLKPATINAERYKELMIDQVIPAIKARMP-RPPGHTIFVQQD-AKPH 789
            ++    + +Y++ +E+       ++KRFITKV+FLAAVARPR   + G  F GKIG+WP  + V A R+ +N  KGT++L P  + AE Y+ +++D+V+PAI+A+MP R  G  I++QQD A PH
Sbjct:   76 FLTTAKKRVYVYADEEV-ALRALKSKRFITKVMFLAAVARPRFDHNKGSMFSGKIGVWPFVEQVVAQRNSRNRPKGTVLLVPQAVTAEVYRTMILDKVVPAIQAKMPQRVQGSLIYLQQDNASPH 199          
BLAST of mRNA_D-mesarthrocarpus_Contig10390.1.1 vs. uniprot
Match: A0A485LKI0_9STRA (Aste57867_22629 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKI0_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.660e-22
Identity = 53/119 (44.54%), Postives = 76/119 (63.87%), Query Frame = 1
Query:  424 YVMRDGRGIYLHPEEDAPGPPRAQNKRFITKVIFLAAVARPRIISD-GVWFDGKIGIWPIADTVAAMRSIKNHKKGTMMLKPATINAERYKELMIDQVIPAIKARMPRPPGHTIFVQQD 777
            Y+ +  R  YL P E  P   + ++KRFITKV+FL+AVARPR I D G+W+DGKIG WP  ++V A R+  N    T   KP T+  + Y+E ++D+V+PAI A+ P+    T+ +Q D
Sbjct:   64 YLSKATRTFYLVPGEREPER-KCKSKRFITKVMFLSAVARPRYIHDTGLWWDGKIGTWPFVESVTAQRASVNRPADTYETKPITVTKDVYREFIVDKVLPAIAAKWPKI-DRTVLLQHD 180          
BLAST of mRNA_D-mesarthrocarpus_Contig10390.1.1 vs. uniprot
Match: W4FAY9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FAY9_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.630e-22
Identity = 56/124 (45.16%), Postives = 78/124 (62.90%), Query Frame = 1
Query:  424 YVMRDGRGIYLHPEEDAPGPPRAQNKRFITKVIFLAAVARPRI-ISDGVWFDGKIGIWPIADTVAAMRSIKNHKKGTMMLKPATINAERYKELMIDQVIPAIKARMPRPPGHTIFVQQD-AKPH 789
            Y+ R  + +YL P E+ P     ++KRFITKV+FL+AVARPR   +   WFDG+IG W    +V A RS +N    TM+  P T+  + Y++++ID VIPAIKA+ P      I +QQD A+PH
Sbjct:  175 YMTRVKKTLYLLPGEEPPHR-STKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQSVPAQRSSRNRPSWTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWPNDKAARILLQQDNARPH 297          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10390.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W4GWE0_9STRA1.450e-2445.97Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
W4GP40_9STRA2.100e-2446.77Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
W4GHD6_9STRA5.350e-2446.46Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6A4YXI9_9STRA3.350e-2345.16Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6A4ZIA5_9STRA7.090e-2343.09Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6A4Z7D1_9STRA7.300e-2344.35Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A485LTD1_9STRA9.360e-2346.22Aste57867_25464 protein n=4 Tax=Aphanomyces stella... [more]
A0A6A5A6A6_9STRA1.460e-2244.00Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A485LKI0_9STRA1.660e-2244.54Aste57867_22629 protein n=1 Tax=Aphanomyces stella... [more]
W4FAY9_9STRA2.630e-2245.16Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10390contigD-mesarthrocarpus_Contig10390:3522..4316 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog157072.XP_008870373.1
Model size795
Max annot lvl157072.XP_008870373.1|-
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.55e-23
EggNOG OGs2CMKC@1|root,2QQNW@2759|Eukaryota
Cds size366
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789177.846312-UTR-D-mesarthrocarpus_Contig10390:3521..39501680789177.846312-UTR-D-mesarthrocarpus_Contig10390:3521..3950Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10390 3522..3950 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789177.860173-CDS-D-mesarthrocarpus_Contig10390:3950..43161680789177.860173-CDS-D-mesarthrocarpus_Contig10390:3950..4316Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10390 3951..4316 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10390.1.1prot_D-mesarthrocarpus_Contig10390.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10390 3951..4316 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10390.1.1

>prot_D-mesarthrocarpus_Contig10390.1.1 ID=prot_D-mesarthrocarpus_Contig10390.1.1|Name=mRNA_D-mesarthrocarpus_Contig10390.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=122bp
MRDGRGIYLHPEEDAPGPPRAQNKRFITKVIFLAAVARPRIISDGVWFDG
KIGIWPIADTVAAMRSIKNHKKGTMMLKPATINAERYKELMIDQVIPAIK
ARMPRPPGHTIFVQQDAKPHTG
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mRNA from alignment at D-mesarthrocarpus_Contig10390:3522..4316+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10390.1.1 ID=mRNA_D-mesarthrocarpus_Contig10390.1.1|Name=mRNA_D-mesarthrocarpus_Contig10390.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=795bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10390:3522..4316+ (Discosporangium mesarthrocarpum MT17_79)
AAGCTGCCTTGTGGGTCGGGGAAGGACATCGCACAGGAGTTTCGAATCTC CCGAACGACAGTTTTCCGTCATCTCAAGGCGTACGACCTCCAGAAGCCAG ATGGACAATCTGTAGACATGTCTCGTGGGCGCGATGGGCGTTGTGGTCGC CGTAATGCGGTGACCGACCCGTGGGAAGTGCTTCAATCAGGCGCACGTCG TACCACAAATGGGCGGTCAAATCGAGATCCCCCTCTCCTCGTTGTGGGGC CTGTGCAAGCGGGTGGGAGTGAGGAAGCACGAACGGTGGGTCAAGCCGGT GCTGTCGGACAAGCAGAAGCGTGATAGGGTGGGTTTTTCGCTAAGCCACA TGCACAGGAAGGGAGGAGCTAGGGTGGTGGTGGACGACATGTACGACTGG GTCCATGTAGATGAGAAGTGGTCTACGTGATGAGGGATGGGAGGGGAATC TACCTGCACCCAGAAGAGGACGCCCCCGGACCGCCAAGGGCCCAGAACAA GAGATTCATCACCAAGGTGATATTCCTTGCTGCTGTGGCAAGGCCTAGGA TAATCTCCGATGGGGTGTGGTTTGACGGCAAGATCGGTATCTGGCCCATC GCGGATACTGTGGCGGCAATGCGCAGCATTAAGAACCACAAGAAGGGCAC TATGATGCTGAAACCAGCTACGATAAACGCGGAGAGGTACAAGGAACTCA TGATCGATCAGGTCATCCCCGCAATCAAGGCGAGAATGCCTAGACCACCA GGTCACACGATCTTCGTGCAGCAGGATGCAAAGCCGCACACGGGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10390:3522..4316+

>mRNA_D-mesarthrocarpus_Contig10390.1.1 ID=mRNA_D-mesarthrocarpus_Contig10390.1.1|Name=mRNA_D-mesarthrocarpus_Contig10390.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=366bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10390:3522..4316+ (Discosporangium mesarthrocarpum MT17_79)
ATGAGGGATGGGAGGGGAATCTACCTGCACCCAGAAGAGGACGCCCCCGG
ACCGCCAAGGGCCCAGAACAAGAGATTCATCACCAAGGTGATATTCCTTG
CTGCTGTGGCAAGGCCTAGGATAATCTCCGATGGGGTGTGGTTTGACGGC
AAGATCGGTATCTGGCCCATCGCGGATACTGTGGCGGCAATGCGCAGCAT
TAAGAACCACAAGAAGGGCACTATGATGCTGAAACCAGCTACGATAAACG
CGGAGAGGTACAAGGAACTCATGATCGATCAGGTCATCCCCGCAATCAAG
GCGAGAATGCCTAGACCACCAGGTCACACGATCTTCGTGCAGCAGGATGC
AAAGCCGCACACGGGG
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