mRNA_D-mesarthrocarpus_Contig1039.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1039.1.2 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI) HSP 1 Score: 325 bits (832), Expect = 1.640e-98 Identity = 156/319 (48.90%), Postives = 222/319 (69.59%), Query Frame = 1
Query: 376 TGMCAGMYWFMYDITGEEKWKLQAKFLTQGLRGAQFEDDQDLGFQVLNSYGLGLKLIPTNNWWERKVLTAAETLDRLRWMEDVGGYYAWKSPKRRPEWERAINIDMIMNMEILLQADIWSGQSLYTEKAISHADRTWTDLVKDDYGTWHVADYTNYTTAGIIDKGTYQGYSDDSTWSRGQAWAVYGFAMFYRITQEPRYLDYAQKTLGYFMDNLPADMVAYADFDAPVEGQC-KDSSANAIVASALIDLTVTTRDLSFAEMAESLLEPLLTA-EYLVNPVTSTYESILMKGCREWGDVELGTITGDYFFLEALLRYKNL 1326
+GM AGM+W+ Y+ TG+ W+ A+ + +GL G + DD DLGFQ LNS+GLG +L+ T+++ + L+ A++L R++ ++ +++W +PK P+WERA+N+DMIMNMEI+L A + G + Y++ A +HAD TW DLV+DDY T+HVADY N +T ++DKGTYQG+ DDSTWSRGQAWA+YGF M +R Q+PR+LDY TL YF+DNLP D V YADFDAPV+ KDSSA AIV SAL +L T + S+ E + L LL + Y + T +++IL WGD +G++T DYF LE+++RY+ +
Sbjct: 57 SGMVAGMFWYQYEATGQNIWRTYAEDMQEGLEGVELLDDNDLGFQTLNSFGLGYRLVGTSSFKDI-TLSGAQSLYDYRYVSNIPAFWSWANPKSEPQWERAVNVDMIMNMEIMLWAAVNDGDAEYSDAAENHADTTWADLVRDDYSTFHVADY-NKSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFIMVHRYLQKPRFLDYGINTLSYFVDNLPDDNVPYADFDAPVDSDNPKDSSATAIVTSALFELFEQTGEPSYLEKGQEFLSSLLLSPNYFDSSATDGWQAILRNSAAAWGDAAVGSVTADYFLLESMVRYQTM 373
BLAST of mRNA_D-mesarthrocarpus_Contig1039.1.2 vs. uniprot
Match: A0A6H5JQV0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV0_9PHAE) HSP 1 Score: 318 bits (815), Expect = 1.080e-96 Identity = 155/317 (48.90%), Postives = 219/317 (69.09%), Query Frame = 1
Query: 382 MCAGMYWFMYDITGEEKWKLQAKFLTQGLRGAQFEDDQDLGFQVLNSYGLGLKLIPTNNWWERKVLTAAETLDRLRWMEDVGGYYAWKSPKRRPEWERAINIDMIMNMEILLQADIWSGQSLYTEKAISHADRTWTDLVKDDYGTWHVADYTNYTTAGIIDKGTYQGYSDDSTWSRGQAWAVYGFAMFYRITQEPRYLDYAQKTLGYFMDNLPADMVAYADFDAPVEGQC-KDSSANAIVASALIDLTVTTRDLSFAEMAESLLEPLL-TAEYLVNPVTSTYESILMKGCREWGDVELGTITGDYFFLEALLRYKNL 1326
M AGM W+ Y+ TG+ W+ A+ + +GL G + DD DLGFQ LNS+GLG +L+ T ++ +R L+ A++L R++ ++ +++W +P P+WERA+N+DMIMNMEI+L A + G + Y++ +HAD TW DLV+DDY T+HVADY + +T ++DKGTYQG+ DDSTWSRGQAWA+YGF M YR +E R+LDYA TL YF+DNLP D V YADFDAPV+ KDSSA AIV SAL +L T + ++ E A+ L LL ++ Y + T +++IL WGD +G++T DYF LE+++RYK +
Sbjct: 1 MVAGMCWYQYEATGQSIWQTYAEDMQEGLEGIEVLDDNDLGFQTLNSFGLGYRLVGTTSFKDR-TLSGAQSLYDYRYVSNIPAFWSWANPTNEPQWERAVNVDMIMNMEIMLWAAVNGGDAEYSDAVENHADTTWADLVRDDYSTYHVADY-DPSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFTMVYRYLKEQRFLDYAINTLSYFVDNLPDDNVPYADFDAPVDSDNPKDSSATAIVTSALFELFELTGEPTYLEKAQEFLTSLLLSSTYFDSSATDGWQAILRNSAAAWGDEAVGSVTADYFLLESMVRYKTM 315
BLAST of mRNA_D-mesarthrocarpus_Contig1039.1.2 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI) HSP 1 Score: 313 bits (802), Expect = 6.690e-94 Identity = 156/317 (49.21%), Postives = 217/317 (68.45%), Query Frame = 1
Query: 382 MCAGMYWFMYDITGEEKWKLQAKFLTQGLRGAQFEDDQDLGFQVLNSYGLGLKLIPTNNWWERKVLTAAETLDRLRWMEDVGGYYAWKSPKRRPEWERAINIDMIMNMEILLQADIWSGQSLYTEKAISHADRTWTDLVKDDYGTWHVADYTNYTTAGIIDKGTYQGYSDDSTWSRGQAWAVYGFAMFYRITQEPRYLDYAQKTLGYFMDNLPADMVAYADFDAPVEGQC-KDSSANAIVASALIDLTVTTRDLSFAEMAESLLEPLL-TAEYLVNPVTSTYESILMKGCREWGDVELGTITGDYFFLEALLRYKNL 1326
M AGM+W+ Y+ T KWK A+ + +GL G + DD DLGFQ LNS+GLG +L+ ++ ER L AE+L R+ ++ +++WK P + P+WERA+N+DMIMNMEI+L A G + Y++ +HAD TW DLV++DY T+HVADY + +T + DKGTYQG+ DDSTWSRGQAWAVYGFAM +R ++ R+LD + TLGYF+DNLP D V YADFDAP KDSSA AIVASAL +L T + ++ E A+ L LL ++ Y + T ++++L + WG+ +G++TGDYF LEA++RYK +
Sbjct: 1 MVAGMFWYQYEATCASKWKTYAEDIQEGLEGVELLDDNDLGFQTLNSFGLGYRLVGKGSFKER-TLAGAESLYDFRYASNIPAFWSWKKPSKEPQWERAVNVDMIMNMEIMLWAANNGGDTDYSDAVENHADTTWADLVREDYSTYHVADY-DPSTGDLEDKGTYQGWQDDSTWSRGQAWAVYGFAMVHRYLKDERFLDRSILTLGYFVDNLPDDNVPYADFDAPENSDNPKDSSATAIVASALFELFELTGEPTYLEKAQEFLSSLLLSSTYFDSSATDGWQALLRESAAAWGEDSVGSVTGDYFLLEAMVRYKTM 315
BLAST of mRNA_D-mesarthrocarpus_Contig1039.1.2 vs. uniprot
Match: A0A6H5KCI0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI0_9PHAE) HSP 1 Score: 294 bits (753), Expect = 4.810e-85 Identity = 150/321 (46.73%), Postives = 210/321 (65.42%), Query Frame = 1
Query: 376 TGMCAGMYWFMYDITGEEKWKLQAKFLTQGLRGAQFEDDQDLGFQVLNSYGLGLKLIPTNNWWERKVLTAAETLDRLRWMEDVGGYYAWKSPKRRPEWERAINIDMIMNMEILLQADIWSGQSLYTEKAISHADRTWTDLVKDDYGTWHVADYTNYTTAGIIDKGTYQGYSDDSTWSRGQAWAVYGFAMFYRITQEPRYLDYAQKTLGYFMDNLPADMVAYADFDAPVEG--QCKDSSANAIVASALIDLTVTTRDLSFAEMAESLLEPLLTAEYLVNPVTSTYESILMKGCREWGDV--ELGTITGDYFFLEALLRYKNL 1326
+GM AGM+W+ Y+ TG+E K A+F GL G + E+D D GFQ+LNS+GLG +L + + +R VLT AE L RW ++ Y++W++P RRP+W+RA+N+DM+MN+EILL A + G+ E A HAD TW D+V++D T HVA Y + T +I+ GTYQGY++ STW+RGQAWA+YG+AM YR E R+LD + L Y+ DNLP D++ ADFDAP KDSSA AIV+S L++L + T D ++ +++ L L T Y+SIL + REWGD E+G + GDYFFLE ++RY+ L
Sbjct: 124 SGMVAGMFWYQYEATGDETMKTAAEFYCSGLEGLESEEDNDTGFQILNSFGLGYRLTGSEEYLQR-VLTGAEALHGFRWDGNIPAYWSWENPSRRPDWDRAVNVDMMMNLEILLWAGLNGGEDHELEVA-GHADSTWKDIVREDNSTNHVAAY-DIDTGELIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLEYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQTYLSALFAGTCYQPDATDGYQSILRRAMREWGDEDGEIGAVFGDYFFLETMVRYQKL 441
BLAST of mRNA_D-mesarthrocarpus_Contig1039.1.2 vs. uniprot
Match: A0A6N6ZAI7_9BACT (Putative unsaturated glucuronyl hydrolase n=1 Tax=Puniceicoccaceae bacterium 5H TaxID=2508868 RepID=A0A6N6ZAI7_9BACT) HSP 1 Score: 252 bits (643), Expect = 1.680e-72 Identity = 136/324 (41.98%), Postives = 197/324 (60.80%), Query Frame = 1
Query: 376 TGMCAGMYWFMYDITGEEKWKLQAKFLTQGLRGAQFEDDQDLGFQVLNSYGLGLKL---IPTNNWWERKVLTAAETLDRLRWMEDVGGYYAWKSPKRRPEWER-AINIDMIMNMEILLQADIWSGQSLYTEKAISHADRTWTDLVKDDYGTWHVADYTNYTTAGIIDKGTYQGYSDDSTWSRGQAWAVYGFAMFYRITQEPRYLDYAQKTLGYFMDNLPA---DMVAYADFDAPVEGQC-KDSSANAIVASALIDLTVTTRDLSFAEMAESLLEPLLTAEYLVNPVTSTYESILMKGCREWGDVELGTITGDYFFLEALLRYKN 1323
+G G++W++ D++ + W + QG+R D D GFQ+ ++G L L + T+++ ++ A+TL RW ++G + AW + P E +NIDM+MNMEI+L A G + + + AISHAD +W DLV+DDY T+HV DY + K T+QG+ DSTWSRGQAWAVYG+ M YR TQ PR L+ A+ T YFM A D V Y+DFDAP++ + +D+SA AIVASA ++L TT + + AE++L L A YL + + YES+L KG +WG+ E+G +TGDY+F+EA+ RY N
Sbjct: 74 SGFVPGIFWYLSDLSNDAIWANRGARWDQGVRSRATATDNDTGFQIYCAFGTALMLGADVDTSDYTS-VIIQGADTLIDERWNSNIGAFRAWPASDSTPNTEPFEVNIDMMMNMEIILWASQHGGNTAWADAAISHADASWEDLVRDDYSTFHVVDYN--LDGSVDSKRTHQGWKTDSTWSRGQAWAVYGYTMLYRYTQLPRMLERAEHTFDYFMTATEAQVDDYVPYSDFDAPIDSENPRDTSAAAIVASAALELYQTTGEQKYLTAAENMLNSLTQAPYL--SIGTDYESVLAKGSEKWGEPEVGAVTGDYYFIEAMWRYLN 392
BLAST of mRNA_D-mesarthrocarpus_Contig1039.1.2 vs. uniprot
Match: D8LHN8_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN8_ECTSI) HSP 1 Score: 244 bits (623), Expect = 7.950e-71 Identity = 123/254 (48.43%), Postives = 173/254 (68.11%), Query Frame = 1
Query: 376 TGMCAGMYWFMYDITGEEKWKLQAKFLTQGLRGAQFEDDQDLGFQVLNSYGLGLKLIPTNNWWERKVLTAAETLDRLRWMEDVGGYYAWKSPKRRPEWERAINIDMIMNMEILLQADIWSGQSLYTEKAISHADRTWTDLVKDDYGTWHVADYTNYTTAGIIDKGTYQGYSDDSTWSRGQAWAVYGFAMFYRITQEPRYLDYAQKTLGYFMDNLPADMVAYADFDAPVEG--QCKDSSANAIVASALIDLTVTT 1131
+GM AGM+W+ Y+ TG+E K A+F GL G + E+D D GFQ+LNS+GLG +L ++++ +R VLT AE L RW ++ Y++W++P +RP+W+RA+N+DM+MN+EILL A + G+ E HAD TW D+V++D T HVA Y + T I+ GTYQGY++ STW+RGQAWA+YG+AM YR E R+LD + L Y+ DNLP D++ ADFDAP KDSSA AIV+S L++L + T
Sbjct: 87 SGMVAGMFWYQYEATGDEAMKTAAEFYCSGLEGLESEEDNDTGFQILNSFGLGYRLTGSDDYLQR-VLTGAEALHDFRWDGNIPAYWSWENPTKRPDWDRAVNVDMMMNLEILLWAGLNGGEDHELEVE-GHADSTWKDIVREDNSTNHVAAY-DIDTGEFIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLET 337
BLAST of mRNA_D-mesarthrocarpus_Contig1039.1.2 vs. uniprot
Match: A0A4Y7ZV10_9GAMM (Glucuronyl hydrolase n=2 Tax=Psychromonas sp. RZ22 TaxID=2555643 RepID=A0A4Y7ZV10_9GAMM) HSP 1 Score: 243 bits (619), Expect = 1.690e-69 Identity = 133/333 (39.94%), Postives = 208/333 (62.46%), Query Frame = 1
Query: 376 TGMCAGMYWFMYDITGEEKWKLQAKFLTQGLRGAQFEDDQDLGFQVLNSYGLGLKLIPTNNWWERKVL-TAAETLDRLRWMEDVGGYYAWKSPKRRP-EWERAINIDMIMNMEILLQADIWSGQSLYTEKAISHADRTWTDLVKDDYGTWHVADYTNYTTAGIIDKGTYQGYSDDSTWSRGQAWAVYGFAMFYRITQEPRYLDYAQKTLGYFMDNLPA---DMVAYADFDAPVE-GQCKDSSANAIVASALIDLTVTTRDLSFAEMAESLLEPLLTAEYLVNPVTSTYESILMKGCREWGDVELGTITGDYFFLEALLRYKNLYTAAPVSPHY 1356
+G G++W++ +T +++WK +A T+G+R + D D GFQ+ +S+GLG + N + V+ T A+TL R+ ++G + +WK P +NID +MNME++L + + YT+ AISHAD+TW + V+++ T+HV Y + ++ K T+QG+ +STWSRGQAWAVY +AM+YR T R L+ ++K+ Y+++ D+V YADFDAP++ +DSSA AIVASALI+L T++ + A+++L L T YL N YESIL+KG +WG+ E+G+I GDYFF+EAL R+K ++T P+ H+
Sbjct: 89 SGFVPGIFWYLSVMTEDKEWKNRAVSWTEGVRARSYATDNDTGFQIFDSFGLGYTIGGENTEDYKSVMVTGAKTLVEERYNNEIGAFRSWKQGVSNPISMPFEVNIDQLMNMELVLWVGKNADKPEYTQMAISHADKTWANNVRENGSTYHVVSYNSQ--GQVVKKRTHQGWKTESTWSRGQAWAVYAYAMYYRYTGLDRMLERSKKSYQYYLEATKKQTNDLVPYADFDAPLDKDNPRDSSAAAIVASALIELYKITKEEQYLNDAQAMLNSLATPTYLAN--NPDYESILLKGSEKWGEPEVGSIFGDYFFVEALYRWK-VWTNKPLPEHF 416
BLAST of mRNA_D-mesarthrocarpus_Contig1039.1.2 vs. uniprot
Match: UPI00200F5605 (glycoside hydrolase family 88 protein n=1 Tax=Agarivorans sp. TSD2052 TaxID=2937286 RepID=UPI00200F5605) HSP 1 Score: 238 bits (607), Expect = 6.590e-68 Identity = 134/325 (41.23%), Postives = 200/325 (61.54%), Query Frame = 1
Query: 376 TGMCAGMYWFMYDITGEEKWKLQAKFLTQGLRGAQFEDDQDLGFQVLNSYGLGLKLIPTNNWWERKVLTA-AETLDRLRWMEDVGGYYAWKSPKRRPE-WERAINIDMIMNMEILLQADIWSGQSL----YTEKAISHADRTWTDLVKDDYGTWHVADYTNYTTAGIIDKGTYQGYSDDSTWSRGQAWAVYGFAMFYRITQEPRYLDYAQKTLGYFMDNLPA---DMVAYADFDAPVEGQC-KDSSANAIVASALIDLTVTTRDLSFAEMAESLLEPLLTAEYLVNPVTSTYESILMKGCREWGDVELGTITGDYFFLEALLRYK 1320
+G G++W++ +T +E W+ +AKF T G+R + D D GFQ+ +S+GLG L +KVL A T+ R+ +++G + +W+ + P +NID +MNME++L W GQ+ YTE AISHAD+TW ++ + T+HV Y ++DK T+QG+ DSTWSRGQAW+VY +AM+YR T R L+ + K+ YF++ D + YADFDAP++ + +DSSA AIVASAL++L T + + AES+L L T E+L + Y+SIL+KG +WG+ E+GTI GDYFF+EAL R++
Sbjct: 77 SGFVPGIFWYLNALTNDEVWQQRAKFWTDGVRSRAYATDNDTGFQIFDSFGLGYTLGGNATPDYKKVLIGGANTMVEQRYNKNIGTFRSWRQGAKNPTILPFEVNIDQLMNMELIL----WVGQNADKPDYTEMAISHADKTWEHNLRKNASTYHVVGYG--LDGKVVDKRTHQGWKADSTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIEATKLQTQDFIPYADFDAPIDDKNPRDSSATAIVASALLELYKITNEEKYLVDAESMLTSLATPEFLA--MDPEYQSILLKGSEKWGEEEVGTIFGDYFFIEALYRWQ 393
BLAST of mRNA_D-mesarthrocarpus_Contig1039.1.2 vs. uniprot
Match: UPI001F1B9B3F (glycoside hydrolase family 88 protein n=1 Tax=Vibrio hippocampi TaxID=654686 RepID=UPI001F1B9B3F) HSP 1 Score: 232 bits (592), Expect = 1.140e-65 Identity = 128/322 (39.75%), Postives = 200/322 (62.11%), Query Frame = 1
Query: 376 TGMCAGMYWFMYDITGEEKWKLQAKFLTQGLRGAQFEDDQDLGFQVLNSYGLGLKLIP-TNNWWERKVLTAAETLDRLRWMEDVGGYYAWKSPKRRPEW-ERAINIDMIMNMEILLQADIWSGQSLYTEKAISHADRTWTDLVKDDYGTWHVADYTNYTTAGIID-KGTYQGYSDDSTWSRGQAWAVYGFAMFYRITQEPRYLDYAQKTLGYFMDNLPA---DMVAYADFDAPVEGQC-KDSSANAIVASALIDLTVTTRDLSFAEMAESLLEPLLTAEYLVNPVTSTYESILMKGCREWGDVELGTITGDYFFLEALLRYK 1320
+G G++W++ +T ++ W+ +A+F T+G+R + D D GFQV +S+GLG + T++ +++ + A TL R+ +D+G + +W P +NID +MNME++L + + YT+ A+SHAD+TW V+D+ T+HV +Y G +D K T+QG+ DSTWSRGQAW+VY +AM+YR T R L+ + K+ YF+ D+V Y+DFDAP++ + KD+SA A+VAS L++L T+D + AE++L L EYL + Y++IL KG +WG+ E+GTI GDYFF+EAL R+K
Sbjct: 82 SGFVPGIFWYLNAMTADQSWQKKAEFWTEGVRSRAYATDNDTGFQVFDSFGLGYTIGGVTSDDYKQVLKDGANTLVTERYNKDIGAFRSWNQRIDNPTTLPFEVNIDQLMNMELVLWVGANADKPEYTQMAVSHADKTWQHGVRDNGSTYHVV---SYNLDGSVDSKRTHQGWQTDSTWSRGQAWSVYAYAMYYRFTGLERMLERSIKSYDYFLSATQQQTNDLVPYSDFDAPIDVRNPKDTSATAVVASGLLELYHITKDEKYLNDAEAMLISLAKPEYLARE--TEYQAILKKGSEKWGEPEVGTIFGDYFFIEALYRWK 398
BLAST of mRNA_D-mesarthrocarpus_Contig1039.1.2 vs. uniprot
Match: R9PSV9_AGAAL (Putative unsaturated glucuronyl hydrolase n=4 Tax=Agarivorans TaxID=261825 RepID=R9PSV9_AGAAL) HSP 1 Score: 232 bits (591), Expect = 1.580e-65 Identity = 125/325 (38.46%), Postives = 207/325 (63.69%), Query Frame = 1
Query: 376 TGMCAGMYWFMYDITGEEKWKLQAKFLTQGLRGAQFEDDQDLGFQVLNSYGLGLKL--IPTNNWWERKVLTAAETLDRLRWMEDVGGYYAWK----SPKRRPEWERAINIDMIMNMEILLQADIWSGQSLYTEKAISHADRTWTDLVKDDYGTWHVADYTNYTTAGIIDKGTYQGYSDDSTWSRGQAWAVYGFAMFYRITQEPRYLDYAQKTLGYFMDNLPA---DMVAYADFDAPVEGQC-KDSSANAIVASALIDLTVTTRDLSFAEMAESLLEPLLTAEYLVNPVTSTYESILMKGCREWGDVELGTITGDYFFLEALLRYK 1320
+G G++W++ ++ +W+ A+ T+G+R + D D GFQ+ NS+GLG + P++++ ++ ++ A TL + R+ +D+G + +W+ +P R P +NID +MNME++L + + +T+ AISHAD+TW V+++ T+HV Y+ + ++ K T+QG+ +STWSRGQAW+VY +AM+YR T R L+ + K+ YF+++ D+V Y+DFDAP++ +DSSA AIVASALI+L T+ + A+ +L L T +YL + + Y+SIL+KG +WG+ E+GTI GDYFF+EAL R++
Sbjct: 83 SGFIPGIFWYLNALSNNGQWQQYAEHWTEGVRSRAYATDNDTGFQIFNSFGLGYTMGKKPSDDY-KQVLIDGASTLVKQRYNKDIGAFRSWRQGISNPTRLPF---EVNIDQLMNMELVLWVGKHANKPEFTKMAISHADKTWEHGVRENGSTYHVVSYS--PSGEVVKKRTHQGWKTESTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIESTKQQTQDLVPYSDFDAPIDDDNPRDSSATAIVASALIELYKITQQEKYLNDAQQMLASLSTPKYLA--MDNNYQSILLKGSEKWGEPEVGTIFGDYFFIEALYRWQ 399 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1039.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1039.1.2 >prot_D-mesarthrocarpus_Contig1039.1.2 ID=prot_D-mesarthrocarpus_Contig1039.1.2|Name=mRNA_D-mesarthrocarpus_Contig1039.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=359bp MSTKYAPRLTLKASITVLHLCILPGSLGILTGMCAGMYWFMYDITGEEKWback to top mRNA from alignment at D-mesarthrocarpus_Contig1039:17740..22834- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1039.1.2 ID=mRNA_D-mesarthrocarpus_Contig1039.1.2|Name=mRNA_D-mesarthrocarpus_Contig1039.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=5095bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1039:17740..22834- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1039:17740..22834- >mRNA_D-mesarthrocarpus_Contig1039.1.2 ID=mRNA_D-mesarthrocarpus_Contig1039.1.2|Name=mRNA_D-mesarthrocarpus_Contig1039.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1077bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1039:17740..22834- (Discosporangium mesarthrocarpum MT17_79)back to top |