mRNA_D-mesarthrocarpus_Contig10383.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10383.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10383.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10383.1.1 vs. uniprot
Match: A0A7S2XZP8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZP8_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 2.430e-8
Identity = 24/30 (80.00%), Postives = 29/30 (96.67%), Query Frame = 1 
Query:   31 QSIDEGAGIDWGTAEALAFGSLLLEGNHVR 120
            ++I+EG GIDWGTAEALAFG+LL+EGNHVR
Sbjct:   54 KTIEEGKGIDWGTAEALAFGTLLMEGNHVR 83
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BLAST of mRNA_D-mesarthrocarpus_Contig10383.1.1 vs. uniprot
Match: W7TVJ9_9STRA (Oxoglutarate dehydrogenase (succinyl-transferring) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVJ9_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 8.090e-8
Identity = 24/30 (80.00%), Postives = 29/30 (96.67%), Query Frame = 1 
Query:   31 QSIDEGAGIDWGTAEALAFGSLLLEGNHVR 120
            ++++EG GIDWGTAEALAFG+LLLEGNHVR
Sbjct:  649 KTVEEGKGIDWGTAEALAFGTLLLEGNHVR 678
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BLAST of mRNA_D-mesarthrocarpus_Contig10383.1.1 vs. uniprot
Match: A0A7S0GI93_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GI93_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 8.110e-8
Identity = 25/27 (92.59%), Postives = 26/27 (96.30%), Query Frame = 1 
Query:   40 DEGAGIDWGTAEALAFGSLLLEGNHVR 120
            D+G GIDWGTAEALAFGSLLLEGNHVR
Sbjct:  286 DKGVGIDWGTAEALAFGSLLLEGNHVR 312
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BLAST of mRNA_D-mesarthrocarpus_Contig10383.1.1 vs. uniprot
Match: A0A7S1D9D1_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9D1_CYCTE)

HSP 1 Score: 54.3 bits (129), Expect = 1.090e-7
Identity = 24/27 (88.89%), Postives = 26/27 (96.30%), Query Frame = 1 
Query:   40 DEGAGIDWGTAEALAFGSLLLEGNHVR 120
            +EG GIDWGTAEA+AFGSLLLEGNHVR
Sbjct:   22 EEGEGIDWGTAEAMAFGSLLLEGNHVR 48
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BLAST of mRNA_D-mesarthrocarpus_Contig10383.1.1 vs. uniprot
Match: X6LB69_RETFI (Transket_pyr domain-containing protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6LB69_RETFI)

HSP 1 Score: 54.7 bits (130), Expect = 1.420e-7
Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 1 
Query:   31 QSIDEGAGIDWGTAEALAFGSLLLEGNHVR 120
            QSI+EG GIDWGT EALAFGSLLLEG HVR
Sbjct:  102 QSIEEGDGIDWGTGEALAFGSLLLEGYHVR 131
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BLAST of mRNA_D-mesarthrocarpus_Contig10383.1.1 vs. uniprot
Match: X6PAD4_RETFI (Transket_pyr domain-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6PAD4_RETFI)

HSP 1 Score: 54.7 bits (130), Expect = 1.520e-7
Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 1 
Query:   31 QSIDEGAGIDWGTAEALAFGSLLLEGNHVR 120
            QSI+EG GIDWGT EALAFGSLLLEG HVR
Sbjct:  408 QSIEEGDGIDWGTGEALAFGSLLLEGYHVR 437
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BLAST of mRNA_D-mesarthrocarpus_Contig10383.1.1 vs. uniprot
Match: A0A7S3LCB0_9STRA (Oxoglutarate dehydrogenase (succinyl-transferring) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LCB0_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 2.070e-7
Identity = 24/27 (88.89%), Postives = 26/27 (96.30%), Query Frame = 1 
Query:   40 DEGAGIDWGTAEALAFGSLLLEGNHVR 120
            +EG GIDWGTAEA+AFGSLLLEGNHVR
Sbjct:  665 EEGEGIDWGTAEAMAFGSLLLEGNHVR 691
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BLAST of mRNA_D-mesarthrocarpus_Contig10383.1.1 vs. uniprot
Match: A0A7S3XQH6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQH6_HETAK)

HSP 1 Score: 54.3 bits (129), Expect = 2.070e-7
Identity = 24/28 (85.71%), Postives = 26/28 (92.86%), Query Frame = 1 
Query:   37 IDEGAGIDWGTAEALAFGSLLLEGNHVR 120
            ++ G GIDWGTAEALAFGSLLLEGNHVR
Sbjct:  555 VEAGVGIDWGTAEALAFGSLLLEGNHVR 582
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BLAST of mRNA_D-mesarthrocarpus_Contig10383.1.1 vs. uniprot
Match: A0A6A0AKX2_HAELA (Transket_pyr domain-containing protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A6A0AKX2_HAELA)

HSP 1 Score: 50.8 bits (120), Expect = 2.540e-7
Identity = 22/28 (78.57%), Postives = 25/28 (89.29%), Query Frame = 1 
Query:   37 IDEGAGIDWGTAEALAFGSLLLEGNHVR 120
            ID G G+DWG AEALAFG+LL+EGNHVR
Sbjct:   40 IDSGEGVDWGFAEALAFGTLLVEGNHVR 67
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BLAST of mRNA_D-mesarthrocarpus_Contig10383.1.1 vs. uniprot
Match: A0A7S4WA40_9STRA (Oxoglutarate dehydrogenase (succinyl-transferring) n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4WA40_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 2.830e-7
Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = 1 
Query:   40 DEGAGIDWGTAEALAFGSLLLEGNHVR 120
            D G GIDWGTAEA+AFGSLLLEGNHVR
Sbjct:  656 DSGKGIDWGTAEAMAFGSLLLEGNHVR 682
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10383.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2XZP8_9STRA2.430e-880.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
W7TVJ9_9STRA8.090e-880.00Oxoglutarate dehydrogenase (succinyl-transferring)... [more]
A0A7S0GI93_9STRA8.110e-892.59Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1D9D1_CYCTE1.090e-788.89Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
X6LB69_RETFI1.420e-786.67Transket_pyr domain-containing protein (Fragment) ... [more]
X6PAD4_RETFI1.520e-786.67Transket_pyr domain-containing protein n=1 Tax=Ret... [more]
A0A7S3LCB0_9STRA2.070e-788.89Oxoglutarate dehydrogenase (succinyl-transferring)... [more]
A0A7S3XQH6_HETAK2.070e-785.71Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6A0AKX2_HAELA2.540e-778.57Transket_pyr domain-containing protein (Fragment) ... [more]
A0A7S4WA40_9STRA2.830e-788.89Oxoglutarate dehydrogenase (succinyl-transferring)... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10383contigD-mesarthrocarpus_Contig10383:400..519 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog653948.CCA19360
PFAMs2-oxogl_dehyd_N,E1_dh,OxoGdeHyase_C,Transket_pyr
Model size120
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00027,RC00627,RC02743,RC02833,RC02883
KEGG koko:K00164
KEGG ReactionR00621,R01933,R01940,R03316,R08549
KEGG Pathwayko00020,ko00310,ko00380,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map00380,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00009,M00011,M00032
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue2.48e-08
EggNOG OGsCOG0567@1|root,KOG0450@2759|Eukaryota
EC1.2.4.2
Descriptionoxoglutarate dehydrogenase (succinyl-transferring) activity
Cds size120
COG categoryC
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789177.4277666-CDS-D-mesarthrocarpus_Contig10383:399..5191680789177.4277666-CDS-D-mesarthrocarpus_Contig10383:399..519Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10383 400..519 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10383.1.1prot_D-mesarthrocarpus_Contig10383.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10383 400..519 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10383.1.1

>prot_D-mesarthrocarpus_Contig10383.1.1 ID=prot_D-mesarthrocarpus_Contig10383.1.1|Name=mRNA_D-mesarthrocarpus_Contig10383.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=40bp
LSSIVSGSPSQSIDEGAGIDWGTAEALAFGSLLLEGNHVR
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mRNA from alignment at D-mesarthrocarpus_Contig10383:400..519-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10383.1.1 ID=mRNA_D-mesarthrocarpus_Contig10383.1.1|Name=mRNA_D-mesarthrocarpus_Contig10383.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=120bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10383:400..519- (Discosporangium mesarthrocarpum MT17_79)
CTCTCTTCTATTGTGTCTGGATCACCCTCGCAGAGTATCGATGAGGGGGC
TGGGATCGACTGGGGGACCGCAGAGGCGCTGGCATTTGGTTCCCTGCTCC
TTGAGGGGAACCACGTGAGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10383:400..519-

>mRNA_D-mesarthrocarpus_Contig10383.1.1 ID=mRNA_D-mesarthrocarpus_Contig10383.1.1|Name=mRNA_D-mesarthrocarpus_Contig10383.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=120bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10383:400..519- (Discosporangium mesarthrocarpum MT17_79)
CTCTCTTCTATTGTGTCTGGATCACCCTCGCAGAGTATCGATGAGGGGGC
TGGGATCGACTGGGGGACCGCAGAGGCGCTGGCATTTGGTTCCCTGCTCC
TTGAGGGGAACCACGTGAGG
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