mRNA_D-mesarthrocarpus_Contig1034.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: A0A1Z5KS64_FISSO (Ribonucleases P/MRP protein subunit RPP25 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS64_FISSO) HSP 1 Score: 88.2 bits (217), Expect = 8.330e-17 Identity = 52/112 (46.43%), Postives = 72/112 (64.29%), Query Frame = 2 Query: 272 QVRVTQHGKVTGYVLHAETVLFGGEKTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESP--LDTTHIGYQPPLS 601
+VR+TQ GK Y+ +A ++ G T+++K MGRAI +AVT+AE +KRK+ LHQ LS+V +V+ P EE VS +TITLS++P LD +H GYQPPLS
Sbjct: 30 EVRITQQGKPRNYISYAMSLFTDGSTTIVLKAMGRAINKAVTIAEILKRKIP-LHQQNTLSSVEMVDVYEPM-EEGLDVVTSRRYVSCMTITLSQTPEALDPSHTGYQPPLS 139
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: A0A1X0P9P6_9TRYP (Alba domain-containing protein n=1 Tax=Trypanosoma theileri TaxID=67003 RepID=A0A1X0P9P6_9TRYP) HSP 1 Score: 89.4 bits (220), Expect = 9.650e-17 Identity = 55/126 (43.65%), Postives = 72/126 (57.14%), Query Frame = 2 Query: 248 KSGMATRRQVRVTQHGKVTGYVLHAETVLFGGE-----KTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESPLDTTHIGYQPPLSLEE 610
+ G ++RVT Y+ +A +L G E TV I MG AI AV +AE VKR+V GLHQTTD+S+ + + P DE+ ++R + VS I ITLS PLD H+GYQPPL EE
Sbjct: 21 EKGQGPENEIRVTSKHGQRSYIAYAIALLRGEEGKTQYDTVKISAMGAAIHNAVNIAEIVKRRVAGLHQTTDISSEVIRDEYEPVDEK-KERLEVERKVSTILITLSLKPLDKNHVGYQPPLPEEE 145
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: A0A7J7PXC7_9CHLO (DNA/RNA-binding protein alba-like protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PXC7_9CHLO) HSP 1 Score: 89.4 bits (220), Expect = 1.860e-16 Identity = 50/116 (43.10%), Postives = 73/116 (62.93%), Query Frame = 2 Query: 254 GMATRRQVRVTQHGKVTGYVLHAETVLFG-GEKTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESPLDTTHIGYQPPL 598
G +VR+T KV Y+ +A +L G +V++KGMG+AI + V VAE +KR++ GLHQ T+ + +V+ P+ EE R + VS ITITLS PLD++++GYQPPL
Sbjct: 14 GDIQENEVRITAVNKVRNYITYAMALLEEKGHSSVVLKGMGKAINKTVVVAEIIKRRMVGLHQITETCSTNIVDVWEPK-EEGLDRLETTRRVSVITITLSREPLDSSNVGYQPPL 128
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: A0A2P6TCW8_CHLSO (Ribonuclease P subunit p25 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TCW8_CHLSO) HSP 1 Score: 89.0 bits (219), Expect = 2.580e-16 Identity = 49/120 (40.83%), Postives = 74/120 (61.67%), Query Frame = 2 Query: 242 PMKSGMATRRQVRVTQHGKVTGYVLHAETVLFG-GEKTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESPLDTTHIGYQPPL 598
P ++ +VR+T GK Y+ + ++L G +V++K MG+AI + VT+AE +KR++ GLHQ T +S+V L ++ P+ EE + VS ITI LS+ PLDT+ GYQPPL
Sbjct: 10 PREAEEHAENEVRITSQGKSRSYISYGTSLLTEKGHSSVVLKAMGKAINKTVTIAEIMKRRIAGLHQNTAISSVELTDKWEPK-EEGLDPIETTRHVSVITIILSKDPLDTSSTGYQPPL 128
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: A0A059BQ58_EUCGR (Alba domain-containing protein n=7 Tax=Myrtoideae TaxID=1699513 RepID=A0A059BQ58_EUCGR) HSP 1 Score: 89.4 bits (220), Expect = 2.800e-16 Identity = 48/127 (37.80%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 242 PMKSGMATRRQVRVTQHGKVTGYVLHAETVLFG-GEKTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESPLDTTHIGYQPPLSLEETAT 619
P + ++R+T G++ Y+ +A T+L G K ++ K MGRAI + VT+ E +KR++ GLHQ T + ++ + + P EE + VS ITITLS+ LDT+ +GYQPPL E T
Sbjct: 10 PREETPIDENEIRITSQGRMRSYITYAMTLLQEKGSKEIVFKAMGRAINKTVTIVELIKRRIVGLHQVTSIGSIDITDTWEPL-EEGLVTLETTRHVSMITITLSKKELDTSSVGYQPPLPAEMVKT 135
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: A0A2P6V1L4_9CHLO (Ribonuclease P subunit p25 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V1L4_9CHLO) HSP 1 Score: 89.0 bits (219), Expect = 2.840e-16 Identity = 50/110 (45.45%), Postives = 71/110 (64.55%), Query Frame = 2 Query: 272 QVRVTQHGKVTGYVLHAETVLFG-GEKTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESPLDTTHIGYQPPL 598
+VR+T GK Y+ + ++L G V++K MG+AI + VT+AE +KR++ GLHQ T +S+V L + P+ EE R + VS ITITLS+ PLDT+ GYQPPL
Sbjct: 20 EVRITSQGKSRSYISYGTSLLTEKGHSAVVLKAMGKAINKTVTIAEIMKRRIVGLHQCTAISSVELKDHWEPK-EEGLDRIETTRHVSVITITLSKEPLDTSLPGYQPPL 128
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: A0A6A6KYJ0_HEVBR (Alba domain-containing protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6KYJ0_HEVBR) HSP 1 Score: 84.7 bits (208), Expect = 9.880e-16 Identity = 46/114 (40.35%), Postives = 71/114 (62.28%), Query Frame = 2 Query: 272 QVRVTQHGKVTGYVLHAETVLFG-GEKTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESPLDTTHIGYQPPLSLEE 610
++R+T G++ Y+ +A T+L G +I+K MGRAI + V +AE +KR++ GLHQ T + + + + P EE + VS ITIT S++ LDTT IGYQPPL +++
Sbjct: 20 EIRITTQGRMRNYITYATTLLQEKGSSEIILKAMGRAINKTVMIAELIKRRIVGLHQNTSIGSNDITDMWEPL-EEGLLPLETVRHVSMITITFSKNELDTTSIGYQPPLPVDQ 132
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: A0A0D6QTD5_ARACU (Alba domain-containing protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6QTD5_ARACU) HSP 1 Score: 87.0 bits (214), Expect = 1.060e-15 Identity = 48/115 (41.74%), Postives = 71/115 (61.74%), Query Frame = 2 Query: 272 QVRVTQHGKVTGYVLHAETVLFG--GEKTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESPLDTTHIGYQPPLSLEE 610
++R+T GK+ Y+ +A T+L G +IIK MGRAI + VT+AE +KR++ GLHQ T++ ++ + + P EE + VS ITITLS LDT GYQPPL +++
Sbjct: 20 EIRITTQGKMRNYITYATTLLQKDKGSAEIIIKAMGRAINKTVTIAEIIKRRIAGLHQITNIGSIDITDSWEPL-EEGLLPLETTRHVSMITITLSTKELDTNSPGYQPPLPVDQ 133
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: I0YRA5_COCSC (Alba-domain-containing protein n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YRA5_COCSC) HSP 1 Score: 85.1 bits (209), Expect = 1.280e-15 Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = 2 Query: 272 QVRVTQHGKVTGYVLHAETVLFG-GEKTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESPLDTTHIGYQPPLSLE 607
+VR+ GK+ Y+ +A T+L G V++K MGRAI + VT+AE +KR++ GLHQ T + +V + + P EE R + VS ITITLS + LD T +GYQ P+ E
Sbjct: 21 EVRIMAAGKMRNYISYATTLLTDKGHDAVVLKAMGRAINKTVTIAEIIKRRIMGLHQNTQIGSVDITDTWEPL-EEGLNRLETTRHVSVITITLSTALLDITTVGYQAPIENE 132
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: A0A8J4D3Z5_9CHLO (Alba domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D3Z5_9CHLO) HSP 1 Score: 85.5 bits (210), Expect = 1.590e-15 Identity = 52/128 (40.62%), Postives = 73/128 (57.03%), Query Frame = 2 Query: 242 PMKSGMATRRQVRVTQHGKVTGYV-LHAETVLFGGEKTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESPLDTTHIGYQPPLSLEETATD 622
P G A +VRV + YV L + G + V++K MG+AI + V +AE +KR+V GLHQ ++ S++TLV+ P +EE Q +VS +TITLS DTTH GYQPPL ++ D
Sbjct: 10 PRDDGPAAENEVRVRSTEQTRFYVSLGLNLLREKGHRAVVLKAMGKAINKTVAIAEVLKRRVAGLHQLSETSSMTLVDEYEP-NEEGLDPIQVSRNVSVLTITLSLDQPDTTHPGYQPPLPADQVKPD 136 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1034.2.1 >prot_D-mesarthrocarpus_Contig1034.2.1 ID=prot_D-mesarthrocarpus_Contig1034.2.1|Name=mRNA_D-mesarthrocarpus_Contig1034.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=483bp MGKNQTCGDGCDGWEHDPLCPAASTDSIICKNCKVAGTESRTVPLSNSFPback to top mRNA from alignment at D-mesarthrocarpus_Contig1034:10450..13617- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1034.2.1 ID=mRNA_D-mesarthrocarpus_Contig1034.2.1|Name=mRNA_D-mesarthrocarpus_Contig1034.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3168bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1034:10450..13617- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1034:10450..13617- >mRNA_D-mesarthrocarpus_Contig1034.2.1 ID=mRNA_D-mesarthrocarpus_Contig1034.2.1|Name=mRNA_D-mesarthrocarpus_Contig1034.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1449bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1034:10450..13617- (Discosporangium mesarthrocarpum MT17_79)back to top |