mRNA_D-mesarthrocarpus_Contig1034.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1034.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig1034.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: A0A1Z5KS64_FISSO (Ribonucleases P/MRP protein subunit RPP25 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS64_FISSO)

HSP 1 Score: 88.2 bits (217), Expect = 8.330e-17
Identity = 52/112 (46.43%), Postives = 72/112 (64.29%), Query Frame = 2 
Query:  272 QVRVTQHGKVTGYVLHAETVLFGGEKTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESP--LDTTHIGYQPPLS 601
            +VR+TQ GK   Y+ +A ++   G  T+++K MGRAI +AVT+AE +KRK+  LHQ   LS+V +V+   P  EE          VS +TITLS++P  LD +H GYQPPLS
Sbjct:   30 EVRITQQGKPRNYISYAMSLFTDGSTTIVLKAMGRAINKAVTIAEILKRKIP-LHQQNTLSSVEMVDVYEPM-EEGLDVVTSRRYVSCMTITLSQTPEALDPSHTGYQPPLS 139
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: A0A1X0P9P6_9TRYP (Alba domain-containing protein n=1 Tax=Trypanosoma theileri TaxID=67003 RepID=A0A1X0P9P6_9TRYP)

HSP 1 Score: 89.4 bits (220), Expect = 9.650e-17
Identity = 55/126 (43.65%), Postives = 72/126 (57.14%), Query Frame = 2 
Query:  248 KSGMATRRQVRVTQHGKVTGYVLHAETVLFGGE-----KTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESPLDTTHIGYQPPLSLEE 610
            + G     ++RVT       Y+ +A  +L G E      TV I  MG AI  AV +AE VKR+V GLHQTTD+S+  + +   P DE+ ++R +    VS I ITLS  PLD  H+GYQPPL  EE
Sbjct:   21 EKGQGPENEIRVTSKHGQRSYIAYAIALLRGEEGKTQYDTVKISAMGAAIHNAVNIAEIVKRRVAGLHQTTDISSEVIRDEYEPVDEK-KERLEVERKVSTILITLSLKPLDKNHVGYQPPLPEEE 145
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: A0A7J7PXC7_9CHLO (DNA/RNA-binding protein alba-like protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PXC7_9CHLO)

HSP 1 Score: 89.4 bits (220), Expect = 1.860e-16
Identity = 50/116 (43.10%), Postives = 73/116 (62.93%), Query Frame = 2 
Query:  254 GMATRRQVRVTQHGKVTGYVLHAETVLFG-GEKTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESPLDTTHIGYQPPL 598
            G     +VR+T   KV  Y+ +A  +L   G  +V++KGMG+AI + V VAE +KR++ GLHQ T+  +  +V+   P+ EE   R +    VS ITITLS  PLD++++GYQPPL
Sbjct:   14 GDIQENEVRITAVNKVRNYITYAMALLEEKGHSSVVLKGMGKAINKTVVVAEIIKRRMVGLHQITETCSTNIVDVWEPK-EEGLDRLETTRRVSVITITLSREPLDSSNVGYQPPL 128
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: A0A2P6TCW8_CHLSO (Ribonuclease P subunit p25 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TCW8_CHLSO)

HSP 1 Score: 89.0 bits (219), Expect = 2.580e-16
Identity = 49/120 (40.83%), Postives = 74/120 (61.67%), Query Frame = 2 
Query:  242 PMKSGMATRRQVRVTQHGKVTGYVLHAETVLFG-GEKTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESPLDTTHIGYQPPL 598
            P ++      +VR+T  GK   Y+ +  ++L   G  +V++K MG+AI + VT+AE +KR++ GLHQ T +S+V L ++  P+ EE     +    VS ITI LS+ PLDT+  GYQPPL
Sbjct:   10 PREAEEHAENEVRITSQGKSRSYISYGTSLLTEKGHSSVVLKAMGKAINKTVTIAEIMKRRIAGLHQNTAISSVELTDKWEPK-EEGLDPIETTRHVSVITIILSKDPLDTSSTGYQPPL 128
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: A0A059BQ58_EUCGR (Alba domain-containing protein n=7 Tax=Myrtoideae TaxID=1699513 RepID=A0A059BQ58_EUCGR)

HSP 1 Score: 89.4 bits (220), Expect = 2.800e-16
Identity = 48/127 (37.80%), Postives = 73/127 (57.48%), Query Frame = 2 
Query:  242 PMKSGMATRRQVRVTQHGKVTGYVLHAETVLFG-GEKTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESPLDTTHIGYQPPLSLEETAT 619
            P +       ++R+T  G++  Y+ +A T+L   G K ++ K MGRAI + VT+ E +KR++ GLHQ T + ++ + +   P  EE     +    VS ITITLS+  LDT+ +GYQPPL  E   T
Sbjct:   10 PREETPIDENEIRITSQGRMRSYITYAMTLLQEKGSKEIVFKAMGRAINKTVTIVELIKRRIVGLHQVTSIGSIDITDTWEPL-EEGLVTLETTRHVSMITITLSKKELDTSSVGYQPPLPAEMVKT 135
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: A0A2P6V1L4_9CHLO (Ribonuclease P subunit p25 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V1L4_9CHLO)

HSP 1 Score: 89.0 bits (219), Expect = 2.840e-16
Identity = 50/110 (45.45%), Postives = 71/110 (64.55%), Query Frame = 2 
Query:  272 QVRVTQHGKVTGYVLHAETVLFG-GEKTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESPLDTTHIGYQPPL 598
            +VR+T  GK   Y+ +  ++L   G   V++K MG+AI + VT+AE +KR++ GLHQ T +S+V L +   P+ EE   R +    VS ITITLS+ PLDT+  GYQPPL
Sbjct:   20 EVRITSQGKSRSYISYGTSLLTEKGHSAVVLKAMGKAINKTVTIAEIMKRRIVGLHQCTAISSVELKDHWEPK-EEGLDRIETTRHVSVITITLSKEPLDTSLPGYQPPL 128
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: A0A6A6KYJ0_HEVBR (Alba domain-containing protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6KYJ0_HEVBR)

HSP 1 Score: 84.7 bits (208), Expect = 9.880e-16
Identity = 46/114 (40.35%), Postives = 71/114 (62.28%), Query Frame = 2 
Query:  272 QVRVTQHGKVTGYVLHAETVLFG-GEKTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESPLDTTHIGYQPPLSLEE 610
            ++R+T  G++  Y+ +A T+L   G   +I+K MGRAI + V +AE +KR++ GLHQ T + +  + +   P  EE     +    VS ITIT S++ LDTT IGYQPPL +++
Sbjct:   20 EIRITTQGRMRNYITYATTLLQEKGSSEIILKAMGRAINKTVMIAELIKRRIVGLHQNTSIGSNDITDMWEPL-EEGLLPLETVRHVSMITITFSKNELDTTSIGYQPPLPVDQ 132
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: A0A0D6QTD5_ARACU (Alba domain-containing protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6QTD5_ARACU)

HSP 1 Score: 87.0 bits (214), Expect = 1.060e-15
Identity = 48/115 (41.74%), Postives = 71/115 (61.74%), Query Frame = 2 
Query:  272 QVRVTQHGKVTGYVLHAETVLFG--GEKTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESPLDTTHIGYQPPLSLEE 610
            ++R+T  GK+  Y+ +A T+L    G   +IIK MGRAI + VT+AE +KR++ GLHQ T++ ++ + +   P  EE     +    VS ITITLS   LDT   GYQPPL +++
Sbjct:   20 EIRITTQGKMRNYITYATTLLQKDKGSAEIIIKAMGRAINKTVTIAEIIKRRIAGLHQITNIGSIDITDSWEPL-EEGLLPLETTRHVSMITITLSTKELDTNSPGYQPPLPVDQ 133
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: I0YRA5_COCSC (Alba-domain-containing protein n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YRA5_COCSC)

HSP 1 Score: 85.1 bits (209), Expect = 1.280e-15
Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = 2 
Query:  272 QVRVTQHGKVTGYVLHAETVLFG-GEKTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESPLDTTHIGYQPPLSLE 607
            +VR+   GK+  Y+ +A T+L   G   V++K MGRAI + VT+AE +KR++ GLHQ T + +V + +   P  EE   R +    VS ITITLS + LD T +GYQ P+  E
Sbjct:   21 EVRIMAAGKMRNYISYATTLLTDKGHDAVVLKAMGRAINKTVTIAEIIKRRIMGLHQNTQIGSVDITDTWEPL-EEGLNRLETTRHVSVITITLSTALLDITTVGYQAPIENE 132
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Match: A0A8J4D3Z5_9CHLO (Alba domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D3Z5_9CHLO)

HSP 1 Score: 85.5 bits (210), Expect = 1.590e-15
Identity = 52/128 (40.62%), Postives = 73/128 (57.03%), Query Frame = 2 
Query:  242 PMKSGMATRRQVRVTQHGKVTGYV-LHAETVLFGGEKTVIIKGMGRAIGRAVTVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITITLSESPLDTTHIGYQPPLSLEETATD 622
            P   G A   +VRV    +   YV L    +   G + V++K MG+AI + V +AE +KR+V GLHQ ++ S++TLV+   P +EE     Q   +VS +TITLS    DTTH GYQPPL  ++   D
Sbjct:   10 PRDDGPAAENEVRVRSTEQTRFYVSLGLNLLREKGHRAVVLKAMGKAINKTVAIAEVLKRRVAGLHQLSETSSMTLVDEYEP-NEEGLDPIQVSRNVSVLTITLSLDQPDTTHPGYQPPLPADQVKPD 136
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1034.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Z5KS64_FISSO8.330e-1746.43Ribonucleases P/MRP protein subunit RPP25 n=1 Tax=... [more]
A0A1X0P9P6_9TRYP9.650e-1743.65Alba domain-containing protein n=1 Tax=Trypanosoma... [more]
A0A7J7PXC7_9CHLO1.860e-1643.10DNA/RNA-binding protein alba-like protein n=1 Tax=... [more]
A0A2P6TCW8_CHLSO2.580e-1640.83Ribonuclease P subunit p25 n=1 Tax=Chlorella sorok... [more]
A0A059BQ58_EUCGR2.800e-1637.80Alba domain-containing protein n=7 Tax=Myrtoideae ... [more]
A0A2P6V1L4_9CHLO2.840e-1645.45Ribonuclease P subunit p25 n=1 Tax=Micractinium co... [more]
A0A6A6KYJ0_HEVBR9.880e-1640.35Alba domain-containing protein n=1 Tax=Hevea brasi... [more]
A0A0D6QTD5_ARACU1.060e-1541.74Alba domain-containing protein n=2 Tax=Araucariace... [more]
I0YRA5_COCSC1.280e-1542.48Alba-domain-containing protein n=2 Tax=Coccomyxa T... [more]
A0A8J4D3Z5_9CHLO1.590e-1540.63Alba domain-containing protein n=2 Tax=Volvox reti... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1034contigD-mesarthrocarpus_Contig1034:10450..13617 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog71139.XP_010061099.1
PFAMsAlba
Model size1543
Max annot lvl35493|Streptophyta
KEGG koko:K14525
KEGG Pathwayko03008,ko03013,map03008,map03013
Hectar predicted targeting categoryother localisation
Exons5
Evalue3.98e-17
EggNOG OGsKOG2567@1|root,KOG2567@2759|Eukaryota,37MQY@33090|Viridiplantae,3GEIG@35493|Streptophyta
EC3.1.26.5
DescriptionRibonuclease P protein subunit p25-like
Cds size1449
COG categoryS
BRITEko00000,ko00001,ko01000,ko03009,ko03016,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1034.2.1prot_D-mesarthrocarpus_Contig1034.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1034 10450..13523 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789174.0264544-CDS-D-mesarthrocarpus_Contig1034:10449..112081680789174.0264544-CDS-D-mesarthrocarpus_Contig1034:10449..11208Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1034 10450..11208 -
1680789174.039126-CDS-D-mesarthrocarpus_Contig1034:11683..117731680789174.039126-CDS-D-mesarthrocarpus_Contig1034:11683..11773Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1034 11684..11773 -
1680789174.0563667-CDS-D-mesarthrocarpus_Contig1034:12328..125831680789174.0563667-CDS-D-mesarthrocarpus_Contig1034:12328..12583Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1034 12329..12583 -
1680789174.0715418-CDS-D-mesarthrocarpus_Contig1034:13065..132301680789174.0715418-CDS-D-mesarthrocarpus_Contig1034:13065..13230Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1034 13066..13230 -
1680789174.088211-CDS-D-mesarthrocarpus_Contig1034:13343..135231680789174.088211-CDS-D-mesarthrocarpus_Contig1034:13343..13523Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1034 13344..13523 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789174.100266-UTR-D-mesarthrocarpus_Contig1034:13523..136171680789174.100266-UTR-D-mesarthrocarpus_Contig1034:13523..13617Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1034 13524..13617 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1034.2.1

>prot_D-mesarthrocarpus_Contig1034.2.1 ID=prot_D-mesarthrocarpus_Contig1034.2.1|Name=mRNA_D-mesarthrocarpus_Contig1034.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=483bp
MGKNQTCGDGCDGWEHDPLCPAASTDSIICKNCKVAGTESRTVPLSNSFP
MKSGMATRRQVRVTQHGKVTGYVLHAETVLFGGEKTVIIKGMGRAIGRAV
TVAETVKRKVKGLHQTTDLSTVTLVNRNTPQDEEARKRAQQPSSVSFITI
TLSESPLDTTHIGYQPPLSLEETATDCHCTLREGNASSLEEEQQSAGSFE
DQLKGDAGPAVRDAQTSLGIVQAQASVLPQQVYPAQEVGIVQPGYPLMAF
PEQQSFHMRQAYARPAQPLQALPMQGHHVRSQSMHDCPLQQGYLANPGFS
VQAWALPVVQGSPTQTQGHSPQGYSAQQQQQQQRLQQPIFPNQQGNIAQG
YPMQGYVLPWQSSMPIQAFPSHGYAHQQVQGVGGEPPGAASNLGFPPGEG
VVGQGQVFQAQGFQDQLAQGFPITGMPVFGTPVQPSPIQGITTHNFGGSM
DGLPMQGLLVSQAYPALEWGTATSQVYAPHMGF
back to top

mRNA from alignment at D-mesarthrocarpus_Contig1034:10450..13617-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1034.2.1 ID=mRNA_D-mesarthrocarpus_Contig1034.2.1|Name=mRNA_D-mesarthrocarpus_Contig1034.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3168bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1034:10450..13617- (Discosporangium mesarthrocarpum MT17_79)
AAGCGCGGTCCGGCCCTCTCGACGCGTTAAGACAGCCTTCTGAGTGAGGG
ACGGAGGAAGAGGTTTAAGTGGGGGTGTGGCTGCTTCTCAGCGGATGGGC
AAGAACCAGACATGTGGAGACGGCTGTGATGGATGGGAACACGACCCATT
GTGCCCCGCTGCTTCTACCGACTCCATTATTTGCAAGAATTGCAAGGTGG
CAGGGACAGAGTCCCGCACCGTGCCTCTGTCTAACTCGTTTCCGATGAAG
AGTGGCATGGCAACCCGACGGCAGGTGCGTCGTCTCTTGTCAGCGACGGA
AGTCCACACGCTGCCCTCGATTGTGCGTGAACTGACCACACGAATTAGTT
TTCTAAGTGAGGGGTCCCTGTACCCCCTCCTGTACAGGTGCGCGTCACAC
AGCACGGTAAAGTTACTGGATATGTGTTGCATGCAGAGACGGTGTTGTTC
GGCGGAGAGAAAACTGTCATCATTAAGGGTATGGGGAGAGCGATTGGCAG
GGCGGTTACCGTGGCCGAGACGGTCAAGCGCAAGGTCAAGGGCCTACACC
AGGTGAATTAAGATGTTGGCCTAACTCGCTACCCCTCGAGCGGGTGATCT
AGTGTTCGTGCCCTCTCGTTTACGGCTTAATATCAAATTGCTCTTCCTCC
CCTTGTTGCAGTCCCACTCACTCCACCAGTGCTTCGTACTTCGTATGAAG
CACTGTAGTTATTATCAAACAACAGTCAGAGCCCAAGAGCACCTCGTACC
TGTGGAATTTGGCCAGGAGTGGCGGCGTCTAGGTCCTATTTTTATGGTAA
CGCAATTTCATATGTTGTTCAATTTAGGATCCAGATGTGCAATACCATGT
GCAAAAACGAACCCACCTTCCTACTACTGCCCAGTACAGTGTAGTTATTA
CTTCACCTGGGCGAAAGCCCTCGTTGGAAAGCCACCCAGGGCACACGCTG
TTGTTCATTGAAGAAATTTCAACAACCACCCCTCTTTCCCAGACTCATAC
GGCTCCGATCTTGTTTCTCTCACCTACACCTCAGACCACAGATCTGTCCA
CGGTTACGTTGGTCAACCGCAACACCCCGCAGGACGAGGAGGCACGCAAG
AGGGCCCAGCAGCCCTCCAGCGTTAGCTTCATCACTATCACCCTATCAGA
ATCCCCCCTGGATACCACCCATATAGGGTACCAACCCCCACTGAGTCTAG
AGGAAACTGCAACCGACTGCCATTGCACATTGAGGGAGGGCAACGCATCC
AGCCTGGAGGAAGAACAACAATCCGCGGGGAGCTTCGAGGTCTGGATGAG
TGGTCTGTGTAGGGGAGCATCTGAACCCCATCTCTTTCCAAATAGAGATC
GCCCCTTGTGCCTAATTTTTTCATTCTTTCCCTTTCAATTGATTAAACCT
TCCCAAAGACTAAGCCATTCTCGTCCTTTCAATCATTCTTTGCGAAATGC
TTCTGGTACCCTTCGTTGTATGAGCACGGAGGAACCCCATCACCGACTTT
CAAGCTGGGGGGAAGGGGAACCCAACTCGCTCAGCAACCTTCACAGCTAG
CTAACTGCGTTCAAATTTGGTAGAATTTTTCCAAAGCTATTTCCTTGGCT
GTGCATGACTTGGTGAACCCCAGAGTTTTGAGCATACGTCCGATGCCTCT
GTCCTCTCTGCTGTAACCCAGGTGGGTCCCGCCTTACCCGCTGTTTTCCT
TGCCCTTTTTTAGTTGCCAAGATTTTGACATCAAGAGCAGGTGCAGTGTG
AACATGAATTGAAGTGTTCTGCCAAAACTGAATCTTCAAGTCTGCTGACA
TTTTGTTGCGGTCCCCCCCGACCTTCTGCCACACCGTTGCACAGGATCAG
CTCAAGGGAGATGCAGGTCCGGCTGTGAGAGATGCACAAACCTCCCTTGG
AATAGTCCAGGCTCAAGCTTCTGTCTTGCCGCAGGTCTGTTGAAATTTTC
GGTTGCGTTTAGATGACAAAAAAACTCCAGCAGGTTATCAACCTGCGATA
AGGTGTTCCCTCTCCCAAGTCATTTCGTAACCACCAGCGTTGTTCTGTTG
CAAGGGTGACAAACAGGAAAATGGCGCTTGATTGTGCCTGTGTCAGTTAG
TAGTTTGCTTGTGCTACAGAGTGAAGAGGAGCTTCTCCAAGAAGCTCAGA
GTTGAACAACACATGATTAAATCGCTGCAGTGATGTCTCGGATGTGTCAG
AGGGAACCCAACTTATGGTAAGGAGTCTAGGGAAGGTGTATCTCCTTCCC
CCAAGACACCTACTTCATACAGTTGTAAAAAAAGCAAGCAGTAAATAAAT
GCACCCAAACTCACCCAAAGTTTTGACATACGGACCATGCCCTTTTTATG
TACTCTTTTTCTCTGTTGCATTCATTGTACTTAAAAAACAATAAAATTCA
TTACCACAGCAAGTCTACCCTGCCCAGGAAGTCGGTATTGTCCAGCCGGG
CTACCCCCTCATGGCCTTCCCAGAGCAGCAGAGCTTCCACATGCGCCAAG
CCTATGCAAGACCGGCTCAACCTCTGCAGGCACTCCCAATGCAAGGCCAC
CATGTGCGCTCCCAGTCCATGCATGACTGTCCTCTCCAGCAGGGCTACCT
GGCCAATCCTGGCTTCTCTGTCCAGGCTTGGGCGCTGCCTGTTGTTCAGG
GCAGCCCCACTCAGACTCAGGGCCATTCCCCTCAGGGGTACTCTGCACAG
CAGCAGCAGCAGCAGCAGCGGCTGCAGCAGCCCATCTTCCCGAACCAGCA
GGGCAACATTGCCCAGGGCTACCCTATGCAAGGCTACGTCCTGCCCTGGC
AGAGCAGCATGCCCATTCAGGCATTCCCCTCACATGGCTATGCCCACCAG
CAGGTTCAGGGAGTTGGTGGCGAGCCCCCAGGTGCCGCCTCAAACCTGGG
CTTCCCACCGGGCGAGGGTGTAGTGGGACAAGGCCAGGTGTTCCAGGCGC
AAGGCTTCCAGGATCAGCTTGCTCAAGGGTTCCCGATCACAGGTATGCCT
GTCTTTGGGACACCGGTCCAACCTTCACCCATTCAGGGCATCACCACACA
CAACTTTGGTGGCTCCATGGATGGCCTCCCCATGCAGGGCTTGCTCGTGT
CTCAGGCGTATCCTGCGCTGGAATGGGGCACGGCCACCAGTCAAGTCTAT
GCCCCCCACATGGGCTTC
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1034:10450..13617-

>mRNA_D-mesarthrocarpus_Contig1034.2.1 ID=mRNA_D-mesarthrocarpus_Contig1034.2.1|Name=mRNA_D-mesarthrocarpus_Contig1034.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1449bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1034:10450..13617- (Discosporangium mesarthrocarpum MT17_79)
ATGGGCAAGAACCAGACATGTGGAGACGGCTGTGATGGATGGGAACACGA
CCCATTGTGCCCCGCTGCTTCTACCGACTCCATTATTTGCAAGAATTGCA
AGGTGGCAGGGACAGAGTCCCGCACCGTGCCTCTGTCTAACTCGTTTCCG
ATGAAGAGTGGCATGGCAACCCGACGGCAGGTGCGCGTCACACAGCACGG
TAAAGTTACTGGATATGTGTTGCATGCAGAGACGGTGTTGTTCGGCGGAG
AGAAAACTGTCATCATTAAGGGTATGGGGAGAGCGATTGGCAGGGCGGTT
ACCGTGGCCGAGACGGTCAAGCGCAAGGTCAAGGGCCTACACCAGACCAC
AGATCTGTCCACGGTTACGTTGGTCAACCGCAACACCCCGCAGGACGAGG
AGGCACGCAAGAGGGCCCAGCAGCCCTCCAGCGTTAGCTTCATCACTATC
ACCCTATCAGAATCCCCCCTGGATACCACCCATATAGGGTACCAACCCCC
ACTGAGTCTAGAGGAAACTGCAACCGACTGCCATTGCACATTGAGGGAGG
GCAACGCATCCAGCCTGGAGGAAGAACAACAATCCGCGGGGAGCTTCGAG
GATCAGCTCAAGGGAGATGCAGGTCCGGCTGTGAGAGATGCACAAACCTC
CCTTGGAATAGTCCAGGCTCAAGCTTCTGTCTTGCCGCAGCAAGTCTACC
CTGCCCAGGAAGTCGGTATTGTCCAGCCGGGCTACCCCCTCATGGCCTTC
CCAGAGCAGCAGAGCTTCCACATGCGCCAAGCCTATGCAAGACCGGCTCA
ACCTCTGCAGGCACTCCCAATGCAAGGCCACCATGTGCGCTCCCAGTCCA
TGCATGACTGTCCTCTCCAGCAGGGCTACCTGGCCAATCCTGGCTTCTCT
GTCCAGGCTTGGGCGCTGCCTGTTGTTCAGGGCAGCCCCACTCAGACTCA
GGGCCATTCCCCTCAGGGGTACTCTGCACAGCAGCAGCAGCAGCAGCAGC
GGCTGCAGCAGCCCATCTTCCCGAACCAGCAGGGCAACATTGCCCAGGGC
TACCCTATGCAAGGCTACGTCCTGCCCTGGCAGAGCAGCATGCCCATTCA
GGCATTCCCCTCACATGGCTATGCCCACCAGCAGGTTCAGGGAGTTGGTG
GCGAGCCCCCAGGTGCCGCCTCAAACCTGGGCTTCCCACCGGGCGAGGGT
GTAGTGGGACAAGGCCAGGTGTTCCAGGCGCAAGGCTTCCAGGATCAGCT
TGCTCAAGGGTTCCCGATCACAGGTATGCCTGTCTTTGGGACACCGGTCC
AACCTTCACCCATTCAGGGCATCACCACACACAACTTTGGTGGCTCCATG
GATGGCCTCCCCATGCAGGGCTTGCTCGTGTCTCAGGCGTATCCTGCGCT
GGAATGGGGCACGGCCACCAGTCAAGTCTATGCCCCCCACATGGGCTTC
back to top