mRNA_D-mesarthrocarpus_Contig1032.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1032.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig1032.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1032.2.1 vs. uniprot
Match: W4GGI5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGI5_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 4.330e-16
Identity = 51/117 (43.59%), Postives = 71/117 (60.68%), Query Frame = 2
Query:  335 PQPPRASNKRFLKMMFLAAVARPR-KLSNGVWFDGKIGI*PIVDVAIARYGSKSRARGDPVLRPGGRGK--YKKIMIDEVIPAIKAKMPKPPGHTIFVHQDDAKPHTKKGVMEAIQA 676
            PQ    S +   K+MFL AVARPR      V +DGKIG+ PIV+  +A   SK+R RG PV  P    K  Y+++++D+VIPAI+AK P   G TI++ Q++A+PH      E + A
Sbjct:  128 PQRKVQSKRHITKVMFLCAVARPRFDFGRRVMWDGKIGLWPIVETKVAARRSKNRDRGTPVTVPMTVTKPIYRRLLVDKVIPAIQAKWPGQRGGTIYLQQNNARPHVAVDDAEVVAA 244          
BLAST of mRNA_D-mesarthrocarpus_Contig1032.2.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 2.130e-15
Identity = 52/118 (44.07%), Postives = 71/118 (60.17%), Query Frame = 2
Query:  335 PQPPRASNKRFLKMMFLAAVARPRKLS--NGVWFDGKIGI*PIVDVAIARYGSKSRARGDPVLRPGGRGK--YKKIMIDEVIPAIKAKMPKPPGHTIFVHQDDAKPHTKKGVMEAIQA 676
            PQ    S +   K+MFL AVARPR  S    +W DGK+G+ P V+  +A+  SK+R RG PV  P    K  Y++ ++D+VIPAI+A+ P   G TI+V QD+AKPH      E + A
Sbjct:  195 PQRKAQSKRHITKVMFLCAVARPRHDSAHRKMW-DGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVLAA 311          
BLAST of mRNA_D-mesarthrocarpus_Contig1032.2.1 vs. uniprot
Match: A0A6G0N758_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6G0N758_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.380e-15
Identity = 50/107 (46.73%), Postives = 70/107 (65.42%), Query Frame = 2
Query:  356 NKRFL-KMMFLAAVARPR-KLSNGVWFDGKIGI*PIVDVAIARYGSKSRARGDPVLRPGG--RGKYKKIMIDEVIPAIKAKMPKPPGHTIFVHQDDAKPHTKKGVME 664
            NKR++ K+MFLAAVARPR      V FD KIGI PIV+   A+  S +R +G PV +     R  Y+K+++D+V+PA +AK+P   G T+FV QD+A PH ++   E
Sbjct:  183 NKRYIGKIMFLAAVARPRYDCHRKVHFDDKIGIWPIVEETTAQRSSVNRPKGAPVTKSVSMTRVLYRKLLVDKVLPAFRAKLPVRRGTTVFVQQDNAGPHVREDDTE 289          
BLAST of mRNA_D-mesarthrocarpus_Contig1032.2.1 vs. uniprot
Match: A0A6A3WM28_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WM28_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.620e-15
Identity = 47/99 (47.47%), Postives = 64/99 (64.65%), Query Frame = 2
Query:  377 MFLAAVARPR-KLSNGVWFDGKIGI*PIVDVAIARYGSKSRARGDPVLRPGG--RGKYKKIMIDEVIPAIKAKMPKPPGHTIFVHQDDAKPHTKKGVME 664
            MFLAAVARPR      V FDGKIGI PIV+   A+  S +R +G PV +     R  Y+K+++D+V+PA +AK+P   G T+FV QD+A PH ++   E
Sbjct:    1 MFLAAVARPRYDCHRKVHFDGKIGIWPIVEETTAQRSSVNRPKGAPVTKSVSMTRVLYRKLLVDKVLPAFRAKLPVRRGTTVFVQQDNAGPHVREDDTE 99          
BLAST of mRNA_D-mesarthrocarpus_Contig1032.2.1 vs. uniprot
Match: A0A6A4ZTP8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4ZTP8_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 4.060e-15
Identity = 44/100 (44.00%), Postives = 65/100 (65.00%), Query Frame = 2
Query:  353 SNKRFLKMMFLAAVARPR-KLSNGVWFDGKIGI*PIVDVAIARYGSKSRARGDPVLRPGGRGK--YKKIMIDEVIPAIKAKMPKPPGHTIFVHQDDAKPH 643
            S +  +K+MFL AVARPR        +DGKIG  P ++  +A+  SK+R +G P+ +P    K  Y++ +ID+VIPAIK++ P    HTI++ QD+AKPH
Sbjct:   36 SKRHIVKVMFLTAVARPRWDFKRHRMWDGKIGTWPFIEHTVAQRRSKNRDKGAPITKPMNVTKKVYRQYLIDKVIPAIKSQWPGQHHHTIYLQQDNAKPH 135          
BLAST of mRNA_D-mesarthrocarpus_Contig1032.2.1 vs. uniprot
Match: A0A485K947_9STRA (Aste57867_1995 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K947_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 9.190e-15
Identity = 51/121 (42.15%), Postives = 76/121 (62.81%), Query Frame = 2
Query:  332 GPQPPRAS--NKRFLK-MMFLAAVARPR-KLSNGVWFDGKIGI*PIVDVAIARYGSKSRARGDPVLRPGG--RGKYKKIMIDEVIPAIKAKMPKPPGHTIFVHQDDAKPHTKKGVMEAIQA 676
            G + PR +  +KR++K +MFL+AVARPR   +   WFDGKIGI     +  A+  S++R  GDPV+ P    R  Y+++++D+VIPAI+AK P  P  T+ + Q++AKPH      E + A
Sbjct:   13 GEKAPRLTCKSKRYIKKVMFLSAVARPRWDPTRNCWFDGKIGIWHFTKIVPAKRTSRNRPAGDPVIEPVSVTRDVYRRMLVDKVIPAIRAKWPSTPT-TVKIQQNNAKPHVLVSDAEVLAA 132          
BLAST of mRNA_D-mesarthrocarpus_Contig1032.2.1 vs. uniprot
Match: A0A6G0PKH1_9STRA (Uncharacterized protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0PKH1_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 3.490e-14
Identity = 50/111 (45.05%), Postives = 70/111 (63.06%), Query Frame = 2
Query:  344 PRASNKRFL-KMMFLAAVARPR-KLSNGVWFDGKIGI*PIVDVAIARYGSKSRARGDPVLRPGG--RGKYKKIMIDEVIPAIKAKMPKPPGHTIFVHQDDAKPHTKKGVME 664
            P   NKR++ K+MFLAAVARPR      V FDGKIGI PIV+   A+  S +R +  PV +     R  Y+K+++D+V+PAI+AK+P     T+FV QD+  PH ++   E
Sbjct:  192 PSCPNKRYIGKIMFLAAVARPRYDYHRKVDFDGKIGIWPIVEEITAQRISVNRPKSAPVTKSVSMTRVLYRKLLVDKVLPAIRAKLPVRRDTTVFVQQDNTGPHVREDDTE 302          
BLAST of mRNA_D-mesarthrocarpus_Contig1032.2.1 vs. uniprot
Match: A0A485LD71_9STRA (Aste57867_19703 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LD71_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 3.730e-14
Identity = 44/100 (44.00%), Postives = 65/100 (65.00%), Query Frame = 2
Query:  353 SNKRFLKMMFLAAVARPR-KLSNGVWFDGKIGI*PIVDVAIARYGSKSRARGDPVLRPGGRGK--YKKIMIDEVIPAIKAKMPKPPGHTIFVHQDDAKPH 643
            S +  +K+MFL AVARPR        +DGKIG  P ++  +A+  SK+R +G P+ +P    K  Y++ +ID+VIPAIK++ P    HTI++ QD+AKPH
Sbjct:   36 SKRHIVKVMFLTAVARPRWDFKRHRMWDGKIGTWPFIEHTVAQRRSKNRDKGAPITKPLNVTKKVYRQYLIDKVIPAIKSQWPGQHRHTIYLQQDNAKPH 135          
BLAST of mRNA_D-mesarthrocarpus_Contig1032.2.1 vs. uniprot
Match: W4FXV7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FXV7_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 4.400e-14
Identity = 49/101 (48.51%), Postives = 67/101 (66.34%), Query Frame = 2
Query:  356 NKRFL-KMMFLAAVARPRKLSNGVW-FDGKIGI*PIVDVAIARYGSKSRARGDPVLRPG--GRGKYKKIMIDEVIPAIKAKMPKPPGHT-IFVHQDDAKPH 643
            +KRF+ K+MFLAAVARPR   +    FDGKIGI P V+  +A+  SK+RARG PV+ P     G Y+  ++D+  PAIKAK P+    + I++ QD+A PH
Sbjct:   82 SKRFITKVMFLAAVARPRYDHHAKKEFDGKIGIWPFVEHTLAKRTSKNRARGAPVITPQTVDSGVYQAAILDKATPAIKAKFPRTSQSSEIYIQQDNASPH 182          
BLAST of mRNA_D-mesarthrocarpus_Contig1032.2.1 vs. uniprot
Match: A0A6A4ZT35_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZT35_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 7.860e-14
Identity = 48/110 (43.64%), Postives = 70/110 (63.64%), Query Frame = 2
Query:  356 NKRFL-KMMFLAAVARPRKLSNGV-WFDGKIGI*PIVDVAIARYGSKSRARGDPVLRPGGRGKYKKIMIDEVIPAIKAKMPKPPG-HTIFVHQDDAKPHTKKGVMEAIQA 676
            +KRF+ K+MFLAAVARPR   +   +FDGKIGI P V+  IA+  S +R +G P++       Y+ ++I++VIPAIKAK+P+      I++ QD+A PH        +QA
Sbjct:   81 SKRFITKVMFLAAVARPRYDPHKKGFFDGKIGIWPFVETVIAKRNSPNRPKGTPLIVQVTADVYRGMIIEKVIPAIKAKVPRQDQTKIIYLQQDNASPHNSVTTQMLLQA 190          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1032.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W4GGI5_9STRA4.330e-1643.59Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
A0A6A5AA16_9STRA2.130e-1544.07Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A6G0N758_9STRA2.380e-1546.73Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A6A3WM28_9STRA2.620e-1547.47Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A6A4ZTP8_9STRA4.060e-1544.00Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A485K947_9STRA9.190e-1542.15Aste57867_1995 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6G0PKH1_9STRA3.490e-1445.05Uncharacterized protein n=3 Tax=Phytophthora fraga... [more]
A0A485LD71_9STRA3.730e-1444.00Aste57867_19703 protein n=2 Tax=Aphanomyces stella... [more]
W4FXV7_9STRA4.400e-1448.51Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6A4ZT35_9STRA7.860e-1443.64Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1032contigD-mesarthrocarpus_Contig1032:20935..21713 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog157072.XP_008872875.1
Model size767
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue9.04e-12
EggNOG OGs2CMKC@1|root,2QQNW@2759|Eukaryota
Cds size315
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789172.6803505-CDS-D-mesarthrocarpus_Contig1032:20934..210901680789172.6803505-CDS-D-mesarthrocarpus_Contig1032:20934..21090Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1032 20935..21090 +
1680789172.6928022-CDS-D-mesarthrocarpus_Contig1032:21102..212611680789172.6928022-CDS-D-mesarthrocarpus_Contig1032:21102..21261Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1032 21103..21261 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789172.7163687-UTR-D-mesarthrocarpus_Contig1032:21261..217131680789172.7163687-UTR-D-mesarthrocarpus_Contig1032:21261..21713Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1032 21262..21713 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1032.2.1prot_D-mesarthrocarpus_Contig1032.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1032 20935..21261 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1032.2.1

>prot_D-mesarthrocarpus_Contig1032.2.1 ID=prot_D-mesarthrocarpus_Contig1032.2.1|Name=mRNA_D-mesarthrocarpus_Contig1032.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=105bp
DVSRGRKGRSGRPSPLIDPREVPTAHRTRYRKWAAKAGVPFSSLWRLCKR
VKPTLTDKQRVDWVGFVLSHLHRRGGSGVLVYDMFDWVHVDEKWFYPMKD
GGKI*
back to top

mRNA from alignment at D-mesarthrocarpus_Contig1032:20935..21713+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1032.2.1 ID=mRNA_D-mesarthrocarpus_Contig1032.2.1|Name=mRNA_D-mesarthrocarpus_Contig1032.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=779bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1032:20935..21713+ (Discosporangium mesarthrocarpum MT17_79)
GATGTGTCCCGAGGGCGGAAGGGGCGCTCCGGTCGCCCATCACCTCTCAT CGATCCGCGGGAGGTCCCTACAGCCCACCGCACGAGGTACCGCAAATGGG CGGCCAAAGCGGGGGTCCCCTTCTCCTCGCTGTGGCGCTTGTGCAAGCGC GTGAAGGTGGCTTGAAAGCCGACCCTCACCGACAAGCAGAGGGTGGATTG GGTGGGTTTTGTCTTGAGCCATCTTCATAGGAGGGGCGGGAGTGGGGTCC TGGTGTACGACATGTTCGACTGGGTCCACGTGGACGAGAAGTGGTTCTAC CCTATGAAGGATGGGGGGAAAATCTAGTTCAACCGGACGAGGAGGTCCCC AACCCCCGAGGGCGTCGAACAAGCGGTTCCTCAAAATGATGTTCCTCGCT GCTGTTGCTCGCCCTAGGAAGCTTTCCAATGGGGTATGGTTTGACGGGAA GATCGGAATCTGACCAATTGTTGACGTGGCCATAGCACGGTACGGCAGTA AAAGTCGTGCCAGGGGAGACCCTGTCCTCAGGCCAGGTGGACGGGGAAAG TACAAGAAGATAATGATCGATGAGGTCATCCCCGCCATCAAGGCCAAGAT GCCTAAGCCGCCAGGCCACACCATCTTCGTGCACCAAGACGATGCCAAGC CGCACACGAAGAAAGGGGTCATGGAGGCAATCCAGGCAGAGGCTTAGGAA CAGCATCATAAGAGAGACTTTGCCTTCCAATTCCCCCAACCTCAATGTGA ACGATCTTGGCTTCTTCCACTCCACCCAG
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1032:20935..21713+

>mRNA_D-mesarthrocarpus_Contig1032.2.1 ID=mRNA_D-mesarthrocarpus_Contig1032.2.1|Name=mRNA_D-mesarthrocarpus_Contig1032.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=315bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1032:20935..21713+ (Discosporangium mesarthrocarpum MT17_79)
GATGTGTCCCGAGGGCGGAAGGGGCGCTCCGGTCGCCCATCACCTCTCAT
CGATCCGCGGGAGGTCCCTACAGCCCACCGCACGAGGTACCGCAAATGGG
CGGCCAAAGCGGGGGTCCCCTTCTCCTCGCTGTGGCGCTTGTGCAAGCGC
GTGAAGCCGACCCTCACCGACAAGCAGAGGGTGGATTGGGTGGGTTTTGT
CTTGAGCCATCTTCATAGGAGGGGCGGGAGTGGGGTCCTGGTGTACGACA
TGTTCGACTGGGTCCACGTGGACGAGAAGTGGTTCTACCCTATGAAGGAT
GGGGGGAAAATCTAG
back to top