mRNA_D-mesarthrocarpus_Contig1000.6.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1000.6.2
Unique NamemRNA_D-mesarthrocarpus_Contig1000.6.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1000.6.2 vs. uniprot
Match: D8LEC4_ECTSI (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEC4_ECTSI)

HSP 1 Score: 541 bits (1393), Expect = 8.700e-186
Identity = 265/343 (77.26%), Postives = 307/343 (89.50%), Query Frame = 1
Query:  265 QAMGWLDETPDRKVRSALLVTLRDITDGKIFVEAERAKLTRLLAKLKEEDGDVAGAADVLQEVHVETYGALDKKEKADFILEQIRLTLAKKDYVRALIQSRKINRKLLLDGDMQEIKIRYYRLMVQYNTHEKAPFDLCQDFHSIYDTPSIKEDKGQ-WQEPLQAAVLFLTLSPFSNHQQDMLFRVVKDTNLDQLPAYKALVKLFTTPEIIGYPIQGQEELEANPSLAAGGPELLEKWKSDFKLRVVQHNIRVVSKYYKQINTKRLAELLGLEEGEAERNVADMVCDGSLTYAKINRPAGVVSFSSPKPAEEVLSEWNSDISQLLQLVERSCHLINKENMLHKL 1290
            +A+GWLDETPD+  R  LLV LRDITDGKI+VEAERAKLTR+LAK+KEEDGDVAGAA+VLQEVHVETYGAL KKEKADFILEQIRLTLAKKD+VRALIQSRKINRK+LLD DMQ+IK+R+Y+LM++Y+THEKA FDLCQDFHSIYDTPS+++ +G+ W++ LQAAVLFL LSP  NHQQDMLFRV +   L++LPAYK LVKLFTTPEIIGYP++ QE LE++P LAAGGPELL KWK D KLR+VQHNIR V+ YYKQINTKRLA+LLGL+E +AER VADMV DGSL YAKI+RP G+++F   KP+EE+LSEWNSDI QLLQLVERSCHLINKENMLHK+
Sbjct:   98 EAVGWLDETPDKDTRVLLLVALRDITDGKIYVEAERAKLTRMLAKIKEEDGDVAGAAEVLQEVHVETYGALTKKEKADFILEQIRLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVRFYKLMIEYDTHEKATFDLCQDFHSIYDTPSVRDKEGEEWKQYLQAAVLFLVLSPNGNHQQDMLFRVAEYKKLEELPAYKMLVKLFTTPEIIGYPVENQEALESDPCLAAGGPELLAKWKEDLKLRIVQHNIRTVASYYKQINTKRLADLLGLDENQAERKVADMVSDGSLAYAKIDRPKGIINFDKRKPSEEILSEWNSDIGQLLQLVERSCHLINKENMLHKI 440          
BLAST of mRNA_D-mesarthrocarpus_Contig1000.6.2 vs. uniprot
Match: A0A835ZAZ9_9STRA (PCI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAZ9_9STRA)

HSP 1 Score: 424 bits (1091), Expect = 4.540e-140
Identity = 222/347 (63.98%), Postives = 270/347 (77.81%), Query Frame = 1
Query:  265 QAMGWLDETPDRKVRSALLVTLRDITDGKIFVEAERAKLTRLLAKLKEEDGDVAGAADVLQEVHVETYGALDKKEKADFILEQIRLTLAKKDYVRALIQSRKINRKLLLDGDMQEIKIRYYRLMVQYNTHEKAPFDLCQDFHSIYDTPSIKEDKGQWQEPLQAAVLFLTLSPFSNHQQDMLFRVVKDTNLDQLPAYKALVKLFTTPEIIGYPIQGQEELEAN--PSLAAGG------PELLEKWKSDFKLRVVQHNIRVVSKYYKQINTKRLAELLGLEEGEAERNVADMVCDGSLTYAKINRPAGVVSFSSPKPAEEVLSEWNSDISQLLQLVERSCHLINKENML 1281
            + M WLDETPD+  + AL+V LRDITDGKIFVE ERA+LTRLLA +KE+DGDVAGA +VLQEV VETYGALDKKEK DFILEQ+RLTL KKDYVRALIQSRKINRK++   DMQE+K+R+YRLM+ Y+ HEK PF LC D+H+I+ T  IK D  Q Q  L++ V++L LSP++N QQDML RV +   LD+L +YK L+KLFTT EII YP+    ELEA+   S+AA G      P LLE+W  D   RVVQHNIRV +KYYKQI T RLA LLGL+EG  ER+++ MV DG+L YA+INRP G++SFS P+P+EEVLS WNSD+S LL+L+E + HLINKE ML
Sbjct:   98 ECMLWLDETPDKATKIALIVALRDITDGKIFVEGERARLTRLLADIKEKDGDVAGAQEVLQEVAVETYGALDKKEKTDFILEQVRLTLLKKDYVRALIQSRKINRKIIEGDDMQELKVRFYRLMLDYDLHEKDPFSLCCDYHAIFATAIIKADAQQRQAALKSCVVYLVLSPYTNTQQDMLHRVSRYPELDELTSYKTLLKLFTTYEIIDYPLPFAAELEAHIKESIAATGTDPELGPPLLEQWLKDLHTRVVQHNIRVAAKYYKQIRTARLATLLGLDEGTTERSLSTMVSDGTL-YARINRPEGIISFSKPQPSEEVLSSWNSDLSSLLRLLEHTTHLINKETML 443          
BLAST of mRNA_D-mesarthrocarpus_Contig1000.6.2 vs. uniprot
Match: A0A7S2V6L0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6L0_9STRA)

HSP 1 Score: 418 bits (1074), Expect = 2.520e-137
Identity = 215/363 (59.23%), Postives = 276/363 (76.03%), Query Frame = 1
Query:  265 QAMGWLDETPDRKVRSALLVTLRDITDGKIFVEAERAKLTRLLAKLKEEDGDVAGAADVLQEVHVETYGALDKKEKADFILEQIRLTLAKKDYVRALIQSRKINRKLLLDGDMQEIKIRYYRLMVQYNTHEKAPFDLCQDFHSIYDTPSIKEDKGQWQEPLQAAVLFLTLSPFSNHQQDMLFRVVKDTNLDQLPAYKALVKLFTTPEIIGYPIQGQEELEANPSLAAGGPELL-EKWKSDFKLRVVQHNIRVVSKYYKQINTKRLAELLGLEEGEAERNVADMVC-------------------DGSLTYAKINRPAGVVSFSSPKPAEEVLSEWNSDISQLLQLVERSCHLINKENMLHKLT 1293
            +AMGW++ETP  + + ALL TLRDITDGKIF+EAERA+LTR LA L E  G V  AADVLQEVHVETYG+LDK+EKA+FILEQIRLTLAKKDYVRALIQSRKI+RK+L + DMQ+IKI +YRLM++Y+T+E+ P +LC+ +HSI  TP + ED  QW+E L+A VLFL LSP +N QQD+L +V  DT L++LP +K L  +FTT ++IGYP+QGQ++LEA+P LA   P  L +KW    + R VQH+IRVVSKYYK+I  +RLAELLGL+  + E +++ MV                    +GS  YA+I+RPAG+VSFS  +P EE+LS WN+DIS+LL LVE++CHLINKENML+K+ 
Sbjct:   96 EAMGWIEETPTPEAKLALLNTLRDITDGKIFLEAERARLTRQLAALHEAAGRVDQAADVLQEVHVETYGSLDKREKAEFILEQIRLTLAKKDYVRALIQSRKISRKVLEEEDMQDIKINFYRLMIEYHTYEEDPLELCRHYHSILHTPKVAEDDAQWKEALEATVLFLVLSPQTNTQQDLLQKVALDTRLEKLPNFKNLTTVFTTQQVIGYPLQGQQDLEAHPCLARHAPPTLPQKWAQQLRTRTVQHSIRVVSKYYKRIRMQRLAELLGLDVPQTESHLSTMVSAGSELVTPTGPSEKDVSAGEGSALYARIDRPAGIVSFSKHQPPEEILSAWNADISELLGLVEKTCHLINKENMLNKIN 458          
BLAST of mRNA_D-mesarthrocarpus_Contig1000.6.2 vs. uniprot
Match: A0A7S2RAT1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAT1_9STRA)

HSP 1 Score: 374 bits (959), Expect = 6.480e-120
Identity = 191/343 (55.69%), Postives = 251/343 (73.18%), Query Frame = 1
Query:  271 MGWLDETPDRKVRSALLVTLRDITDGKIFVEAERAKLTRLLAKLKEEDGDVAGAADVLQEVHVETYGALDKKEKADFILEQIRLTLAKKDYVRALIQSRKINRKLLLDGDMQEIKIRYYRLMVQYNTHEKAPFDLCQDFHSIYDTPSIKEDKGQ----WQEPLQAAVLFLTLSPFSNHQQDMLFRVVKDTNLDQLPAYKALVKLFTTPEIIGYPIQGQEELEANPSLAAGGPELLEKWKSDFKLRVVQHNIRVVSKYYKQINTKRLAELLGLEEGEAERNVADMVCDGSLTYAKINRPAGVVSFSSPKPAEEVLSEWNSDISQLLQLVERSCHLINKENMLHK 1287
            MGW+D TPD+  +  LLV LR++TDGKI+VEAERA++TR LA++KE DGD+AGA DVL +V+VETYGAL K+EK DFILEQIR+T+AK+D+VR LI ++K+ +K++ + D+Q++K+RY+RLM +Y  HEK  F+L Q F+S+YDTP I ED       W+  L++ +LFL L+P +NHQ DML R+     L+QL  +  +VKLFTT EII +P+  Q  +E       G PEL   W+     R  QHN+RVV+KYYK+I   RLAELLGL   EAE+ ++ +V  G+L YAKI+RPAG+ SF S   AEE LSEW+SDI QLL LVER+CHLINKENMLHK
Sbjct:  132 MGWIDTTPDKATKVDLLVALREVTDGKIYVEAERARITRQLAEIKEADGDIAGACDVLLDVYVETYGALSKREKVDFILEQIRMTIAKQDWVRVLIVAKKVQKKIIDEPDLQDLKMRYHRLMTEYYLHEKDAFELAQSFYSLYDTPCIAEDDSDLVSGWKHHLKSCILFLCLAPQTNHQADMLHRIAAIEKLEQLDEWHGVVKLFTTDEIITFPLPQQPVVEQLLK-EVGTPELFPYWQQQTHERTTQHNMRVVAKYYKRIRMVRLAELLGLTVDEAEKQLSALVSQGAL-YAKIDRPAGIASFKSRATAEETLSEWSSDIGQLLSLVERTCHLINKENMLHK 472          
BLAST of mRNA_D-mesarthrocarpus_Contig1000.6.2 vs. uniprot
Match: A0A6V2BEV7_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2BEV7_9STRA)

HSP 1 Score: 361 bits (926), Expect = 3.380e-115
Identity = 181/335 (54.03%), Postives = 249/335 (74.33%), Query Frame = 1
Query:  280 LDETPD--RKVRSALLVTLRDITDGKIFVEAERAKLTRLLAKLKEEDGDVAGAADVLQEVHVETYGALDKKEKADFILEQIRLTLAKKDYVRALIQSRKINRKLLLDGDMQEIKIRYYRLMVQYNTHEKAPFDLCQDFHSIYDTPSIKEDKGQWQEPLQAAVLFLTLSPFSNHQQDMLFRVVKDTNLDQLPAYKALVKLFTTPEIIGYPIQGQEELEANPSLAAGGPELLEKWKSDFKLRVVQHNIRVVSKYYKQINTKRLAELLGLEEGEAERNVADMVCDGSLTYAKINRPAGVVSFSSPKPAEEVLSEWNSDISQLLQLVERSCHLINKENM 1278
            LD + D  R +R  L+VTLRDITDGKIF+EAERA+LTR LA +KEE+GD+A AA+VLQ+VHVETYG+L K+EK +FILEQ+RLTL K+DY+RA I + KINRK + +  M++ KI+++ LM +Y+ HEK  F+L +D+HSIY T S++ D+ QW++ LQ++VLFL LSP+SN QQDM+ R+  D NL+++ + +  +KL    EII +P+  Q ELE+  +   GG EL   W+  F  R+VQHN+RV + YY++I+ KRLA+LLGL+  E E  +A MV DGS+ YAKI+RP  ++ F++ K  E VLS+W SDIS LL LVE + HLI+KENM
Sbjct:  122 LDVSTDEQRVIRERLVVTLRDITDGKIFLEAERARLTRALATIKEEEGDIAAAANVLQDVHVETYGSLSKREKVEFILEQMRLTLGKQDYIRAAIVAGKINRKAIAEEGMEQEKIKFFTLMTEYHRHEKDAFELAKDYHSIYSTSSVQADENQWRDALQSSVLFLALSPYSNEQQDMMNRIYIDPNLEKIDSCRETLKLLLRKEIINFPLPHQTELESMGAFTIGGDELTSHWRKTFHTRIVQHNVRVAALYYRRIHGKRLAQLLGLKPAELEAEIASMVSDGSV-YAKIDRPGDIIRFAAKKTPEAVLSDWASDISSLLDLVESTTHLIHKENM 455          
BLAST of mRNA_D-mesarthrocarpus_Contig1000.6.2 vs. uniprot
Match: A0A4D9CRV0_9STRA (PCI domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRV0_9STRA)

HSP 1 Score: 359 bits (922), Expect = 9.460e-115
Identity = 195/392 (49.74%), Postives = 275/392 (70.15%), Query Frame = 1
Query:  148 VVALSRDKESLVSCFWLGLGSCLLNLW*KIP--KSAYPSSLQ-AMG--WLDETPDRKVRSALLVTLRDITDGKIFVEAERAKLTRLLAKLKEEDGDVAGAADVLQEVHVETYGALDKKEKADFILEQIRLTLAKKDYVRALIQSRKINRKLLLDGD--MQEIKIRYYRLMVQYNT-HEKAPFDLCQDFHSIYDTPSIKEDKGQWQEPLQAAVLFLTLSPFSNHQQDMLFRVVK--DTNLDQLPAYKALVKLFTTPEIIGYPIQGQEELEANPSLAAGGPELLEKWKSDFKLRVVQHNIRVVSKYYKQINTKRLAELLGLEEGEAERNVADMVCDGSLTYAKINRPAGVVSFSSPKPAEEVLSEWNSDISQLLQLVERSCHLINKENMLHKLT 1293
             + L R+K+      W  + + L  L  +    K+A  + +Q AMG  +LD TPD + +  L+VTLRDITDGKIFVE ERA+LTR L+ L E +G VA A D++Q+VHVETYG+LDK+EK +FILEQIRLTLAKKD++R  I ++K+ +KLL   D  +Q +K+++YRLM++Y++  EK  F++ Q +HSIY+TP ++ ++ +W+  L A VLFL ++P SN Q DML R+V+  +  L QLP YK ++K +TT EII YP+    ++E++P+L   G EL + W    + RV+QHNIRV+S YYK+I   R A+LL L+  E E N+A +V +G+L YA+I+RPA  VSFS  K AEE LS+W +DIS+LL+LVER+ HLINKE MLHK+ 
Sbjct:   61 TIRLVREKKD-----WEQMNTTLTQLSKRRSQNKAAISAMVQEAMGPSYLDATPDAESKRKLIVTLRDITDGKIFVETERARLTRTLSHLLEAEGKVAEACDIIQDVHVETYGSLDKQEKLEFILEQIRLTLAKKDFIRTYIIAKKVTKKLLEGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEESEWRAALSACVLFLIIAPHSNQQSDMLHRLVRQEEDQLAQLPVYKEILKTYTTREIIRYPLPQLPDIESHPALTLYGHELAQHWLQQLRTRVIQHNIRVLSAYYKKIRLTRAADLLSLDVSELENNIATLVSEGAL-YARIDRPANQVSFSPTKIAEETLSDWAADISELLRLVERTTHLINKEQMLHKVV 446          
BLAST of mRNA_D-mesarthrocarpus_Contig1000.6.2 vs. uniprot
Match: A0A7S1ZZ80_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZ80_TRICV)

HSP 1 Score: 353 bits (906), Expect = 6.560e-112
Identity = 182/350 (52.00%), Postives = 246/350 (70.29%), Query Frame = 1
Query:  241 KSAYPSSLQAMGW----LDETPDRKVRSALLVTLRDITDGKIFVEAERAKLTRLLAKLKEEDGDVAGAADVLQEVHVETYGALDKKEKADFILEQIRLTLAKKDYVRALIQSRKINRKLLLDGDMQEIKIRYYRLMVQYNTHEKAPFDLCQDFHSIYDTPSIKEDKGQWQEPLQAAVLFLTLSPFSNHQQDMLFRVVKDTNLDQLPAYKALVKLFTTPEIIGYPIQGQEELEANPSLAAGGPELLEKWKSDFKLRVVQHNIRVVSKYYKQINTKRLAELLGLEEGEAERNVADMVCDGSLTYAKINRPAGVVSFSSPKPAEEVLSEWNSDISQLLQLVERSCHLINKENM 1278
            + A P  LQ  G+    +     + +R  L+V L +ITDGKIF+EAERA+LTR LA +KEEDGD+A AA+VLQ+VHVETYG+L K+EK +FILEQ+RLTL KKDY+RA I + KINRK + +  M+  KI+++ LM +Y+ HEK   +L +D+HSIY T S++ ++  W++ LQ+ VLFL LS +SN QQDML R+  D NL+++ + K  VKL    EII YP+  Q ELEA PS   GGP+L   W   F  R+VQHN+RV + YY++I+ +RLA+LLGLE  E E  +++MV DGS+ YAKI+RP  ++ FS  K  E +LS+W SDIS LL LVE + HLI+KE M
Sbjct:  129 QKAIPWVLQGDGFTPLPVQNEEQKAIREKLVVALMEITDGKIFLEAERARLTRALATIKEEDGDIAAAAEVLQDVHVETYGSLSKREKVEFILEQMRLTLGKKDYIRAAIVAGKINRKAVSEEGMEGEKIKFFTLMTEYHRHEKDAIELAKDYHSIYSTSSVQANEADWKDALQSTVLFLALSQYSNEQQDMLNRINLDPNLEKIESCKETVKLLLKKEIIHYPLPHQAELEAMPSFTVGGPDLTAHWHKIFHTRIVQHNVRVAALYYRRIHGRRLAQLLGLEPAELEAEISNMVSDGSV-YAKIDRPNDIIRFSQKKTPEAILSDWASDISSLLHLVESTTHLIHKEQM 477          
BLAST of mRNA_D-mesarthrocarpus_Contig1000.6.2 vs. uniprot
Match: A0A7S2S703_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S703_9STRA)

HSP 1 Score: 350 bits (898), Expect = 5.690e-111
Identity = 180/351 (51.28%), Postives = 247/351 (70.37%), Query Frame = 1
Query:  241 KSAYPSSLQAMGW----LDETPDRKVRSALLVTLRDITDGKIFVEAERAKLTRLLAKLKEEDGDVAGAADVLQEVHVETYGALDKKEKADFILEQIRLTLAKKDYVRALIQSRKINRKLLLDGDMQEIKIRYYRLMVQYNTHEKAPFDLCQDFHSIYDTPSIKEDKGQWQEPLQAAVLFLTLSPFSNHQQDMLFRVVKDTNLDQLPAYKALVKLFTTPEIIGYPIQGQEELEANPSLAAGGPELLEKWKSDFKLRVVQHNIRVVSKYYKQINTKRLAELLGLEEGEAERNVADMVCDGSLTYAKINRPAGVVSFSSPKPAEEVLSEWNSDISQLLQLVERSCHLINKENML 1281
            + A P  L+  G+    +     + +R  L+V LRDITDGKIF+E ERA+LTR LA +KE+DGD+ GA+DVLQEVHVETYG+L K+EK +FILEQ+RLTL KKDYVR  I S KINRK + +  M++ KI+Y+ LM +Y+ HE+  ++L +D+H IY T +++ ++ +W+E LQ  V+FL+LSP+S  QQDML R+  D NL+++ A K  VKLF   E I YP+  Q ELE+     A G  L+  WK  F+ R++QHN+RV S YY++I+ KRLA+LLGL   E ER +A+MV +G + YAKI+RP  ++ F+  K  E VLS+W SD+S LL LVE + HLINKENM+
Sbjct:  109 EKAIPWVLKGKGFEPLDVSNEEQKAIREKLVVALRDITDGKIFLERERARLTRALAIIKEQDGDIPGASDVLQEVHVETYGSLSKREKIEFILEQMRLTLGKKDYVRTAIVSGKINRKAIAEEGMEQEKIQYFTLMTEYHKHERNSYELAKDYHQIYQTSTVQANEEKWREALQCTVVFLSLSPYSMEQQDMLNRINIDPNLEKIIACKDTVKLFLKKEFIKYPMPYQSELESLSVFHADGEVLMAHWKKTFRTRIIQHNVRVASLYYRRIHGKRLAQLLGLSPDELEREIANMVSNGDV-YAKIDRPCDIIRFAQKKTPEAVLSDWASDVSSLLNLVESTTHLINKENMM 458          
BLAST of mRNA_D-mesarthrocarpus_Contig1000.6.2 vs. uniprot
Match: A0A7S4A230_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A230_9STRA)

HSP 1 Score: 346 bits (887), Expect = 2.070e-109
Identity = 178/350 (50.86%), Postives = 252/350 (72.00%), Query Frame = 1
Query:  265 QAMGWLDETP---DRKVRSALLVTLRDITDGKIFVEAERAKLTRLLAKLKEEDGDVAGAADVLQEVHVETYGALDKKEKADFILEQIRLTLAKKDYVRALIQSRKINRKLLLDGDMQEIKIRYYRLMVQYNTHEKAPFDLCQDFHSIYDTPSIKEDKGQWQEPLQAAVLFLTLSPFSNHQQDMLFRVVKDTN----LDQLPAYKALVKLFTTPEIIGYPI--QGQEELEANPSLAAGGPELLEKWKSDFKLRVVQHNIRVVSKYYKQINTKRLAELLGLEEGEAERNVADMVCDGSLTYAKINRPAGVVSFSSPKPAEEVLSEWNSDISQLLQLVERSCHLINKENMLHK 1287
            Q +  L++T    D   R  LL TL D+TDGK++ EAERAKLTR+L+ LKE  GDVA AAD+LQ+V+VETYGAL K+EK D+IL+Q+RL LAK D VRA I S+K+ RK L + D+Q++K+R+Y+LM +Y+  E APFDL Q+F +I++T ++++D+  W++ L +  LFL LS  +    DM+ RV+ D      L++LP  K L+ LFTT EI+ YP+  + Q  +EA+P+L   G E+ ++WK+  + RV+QHNIRVVS YY+Q++  RLA LLGL   EAE++V+DMV D  L YAKI+RP G++ F+ P+  +EVL +W SDIS++L LVE +C+LINKE M+HK
Sbjct:  101 QGLEQLEDTSVKLDDATREELLKTLCDVTDGKMYCEAERAKLTRMLSALKERQGDVASAADILQDVNVETYGALSKREKVDYILDQVRLMLAKGDRVRAYILSKKVQRKTLEEDDLQDLKVRFYKLMSEYHVLEDAPFDLAQNFWAIFNTKTVQDDEASWRDALSSTALFLALSQHAPGVSDMMHRVLADATAAPKLEKLPTAKHLLTLFTTQEIVAYPLTEEHQRAVEAHPALHTAGAEIHQRWKNTLRERVIQHNIRVVSGYYRQLSMARLANLLGLSVDEAEKHVSDMVSDSGL-YAKIDRPKGIIVFAKPQSPDEVLQDWASDISKMLSLVETTCYLINKETMMHK 449          
BLAST of mRNA_D-mesarthrocarpus_Contig1000.6.2 vs. uniprot
Match: B7FQA9_PHATC (Regulatory proteasome non-atpase subunit 5 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQA9_PHATC)

HSP 1 Score: 344 bits (882), Expect = 1.270e-108
Identity = 177/324 (54.63%), Postives = 234/324 (72.22%), Query Frame = 1
Query:  307 RSALLVTLRDITDGKIFVEAERAKLTRLLAKLKEEDGDVAGAADVLQEVHVETYGALDKKEKADFILEQIRLTLAKKDYVRALIQSRKINRKLLLDGDMQEIKIRYYRLMVQYNTHEKAPFDLCQDFHSIYDTPSIKEDKGQWQEPLQAAVLFLTLSPFSNHQQDMLFRVVKDTNLDQLPAYKALVKLFTTPEIIGYPIQGQEELEANPSLAAGGPELLEKWKSDFKLRVVQHNIRVVSKYYKQINTKRLAELLGLEEGEAERNVADMVCDGSLTYAKINRPAGVVSFSSPKPAEEVLSEWNSDISQLLQLVERSCHLINKENM 1278
            R  L+V LRD+TDGK+F+E ERA+LTR LA +KE+ GD++ AA+VLQ+VHVETYG+L KK+K +FILEQ+RLTLAKKD+VRA I + K+++K L + +M+  K+++Y LM  Y+ H+K   DL +D+H+IY TP I  D  +W+E LQA V+FL LSP+ N QQDML R+  + NL++LPA K  + L    EII YP+  Q ELEA P    GG +L   W   F  R++QHNIRVVS YYK+I+  RLA+LL LE    E+ +A MV +GS+ YAKI+RP  +V FS PK AE VLS+W SDI +LL LVE + HLI+KENM
Sbjct:  132 RDRLVVVLRDVTDGKLFLERERAQLTRALATIKEQQGDISEAANVLQDVHVETYGSLSKKDKIEFILEQMRLTLAKKDFVRAAIVAGKVSKKNLAEENMKTYKVQFYTLMTIYHRHDKNALDLARDYHAIYLTPHILADGVKWREALQATVVFLALSPYDNEQQDMLNRIALEENLEKLPACKKTIDLLLKKEIINYPMTHQAELEALPVCHEGGEDLAAHWHEVFHRRIIQHNIRVVSVYYKRIHGARLAQLLQLEPARVEKEIASMVSEGSI-YAKIDRPKDIVRFSQPKTAEAVLSDWASDIDKLLNLVETTTHLIDKENM 454          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1000.6.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEC4_ECTSI8.700e-18677.26PCI domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZAZ9_9STRA4.540e-14063.98PCI domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2V6L0_9STRA2.520e-13759.23Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RAT1_9STRA6.480e-12055.69Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6V2BEV7_9STRA3.380e-11554.03Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A4D9CRV0_9STRA9.460e-11549.74PCI domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S1ZZ80_TRICV6.560e-11252.00Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2S703_9STRA5.690e-11151.28Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S4A230_9STRA2.070e-10950.86Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
B7FQA9_PHATC1.270e-10854.63Regulatory proteasome non-atpase subunit 5 n=3 Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1000contigD-mesarthrocarpus_Contig1000:9868..17204 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LEC4
Preferred namePSMD12
PFAMsPCI
Model size1900
Max annot lvl2759|Eukaryota
KEGG koko:K03035
KEGG Pathwayko03050,ko05169,map03050,map05169
KEGG ModuleM00341
Hectar predicted targeting categoryother localisation
GOsGO:0000338,GO:0000502,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005838,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0007088,GO:0007275,GO:0007346,GO:0008021,GO:0008150,GO:0008152,GO:0008180,GO:0008541,GO:0009056,GO:0009057,GO:0009896,GO:0009987,GO:0010498,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0016192,GO:0016579,GO:0016604,GO:0016607,GO:0019538,GO:0019941,GO:0022624,GO:0030054,GO:0030071,GO:0030133,GO:0030141,GO:0030163,GO:0031331,GO:0031410,GO:0031595,GO:0031597,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032270,GO:0032436,GO:0032501,GO:0032502,GO:0032940,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034399,GO:0034515,GO:0034774,GO:0036211,GO:0036230,GO:0042119,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044445,GO:0044446,GO:0044451,GO:0044456,GO:0044464,GO:0045055,GO:0045202,GO:0045321,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046903,GO:0048518,GO:0048522,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051247,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060205,GO:0062033,GO:0065007,GO:0070013,GO:0070382,GO:0070646,GO:0070647,GO:0071704,GO:0090068,GO:0097458,GO:0097708,GO:0098793,GO:0099503,GO:0101002,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1904813,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:2001252
Exons9
Evalue9.07e-191
EggNOG OGsCOG5071@1|root,KOG1498@2759|Eukaryota
Descriptionproteasome-mediated ubiquitin-dependent protein catabolic process
Cds size1029
COG categoryO
BRITEko00000,ko00001,ko00002,ko03051
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1000.6.2prot_D-mesarthrocarpus_Contig1000.6.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1000 10469..16934 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789145.867562-UTR-D-mesarthrocarpus_Contig1000:9867..104681680789145.867562-UTR-D-mesarthrocarpus_Contig1000:9867..10468Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1000 9868..10468 -
1680789146.059579-UTR-D-mesarthrocarpus_Contig1000:16934..172041680789146.059579-UTR-D-mesarthrocarpus_Contig1000:16934..17204Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1000 16935..17204 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789145.8792903-CDS-D-mesarthrocarpus_Contig1000:10468..105731680789145.8792903-CDS-D-mesarthrocarpus_Contig1000:10468..10573Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1000 10469..10573 -
1680789145.890547-CDS-D-mesarthrocarpus_Contig1000:10979..110681680789145.890547-CDS-D-mesarthrocarpus_Contig1000:10979..11068Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1000 10980..11068 -
1680789145.9032967-CDS-D-mesarthrocarpus_Contig1000:11345..114821680789145.9032967-CDS-D-mesarthrocarpus_Contig1000:11345..11482Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1000 11346..11482 -
1680789145.917846-CDS-D-mesarthrocarpus_Contig1000:12002..121151680789145.917846-CDS-D-mesarthrocarpus_Contig1000:12002..12115Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1000 12003..12115 -
1680789145.9293945-CDS-D-mesarthrocarpus_Contig1000:12482..126561680789145.9293945-CDS-D-mesarthrocarpus_Contig1000:12482..12656Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1000 12483..12656 -
1680789145.9411871-CDS-D-mesarthrocarpus_Contig1000:14275..143411680789145.9411871-CDS-D-mesarthrocarpus_Contig1000:14275..14341Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1000 14276..14341 -
1680789145.9886765-CDS-D-mesarthrocarpus_Contig1000:14880..149821680789145.9886765-CDS-D-mesarthrocarpus_Contig1000:14880..14982Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1000 14881..14982 -
1680789146.028689-CDS-D-mesarthrocarpus_Contig1000:15735..158491680789146.028689-CDS-D-mesarthrocarpus_Contig1000:15735..15849Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1000 15736..15849 -
1680789146.04785-CDS-D-mesarthrocarpus_Contig1000:16805..169341680789146.04785-CDS-D-mesarthrocarpus_Contig1000:16805..16934Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1000 16806..16934 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1000.6.2

>prot_D-mesarthrocarpus_Contig1000.6.2 ID=prot_D-mesarthrocarpus_Contig1000.6.2|Name=mRNA_D-mesarthrocarpus_Contig1000.6.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=343bp
MGWLDETPDRKVRSALLVTLRDITDGKIFVEAERAKLTRLLAKLKEEDGD
VAGAADVLQEVHVETYGALDKKEKADFILEQIRLTLAKKDYVRALIQSRK
INRKLLLDGDMQEIKIRYYRLMVQYNTHEKAPFDLCQDFHSIYDTPSIKE
DKGQWQEPLQAAVLFLTLSPFSNHQQDMLFRVVKDTNLDQLPAYKALVKL
FTTPEIIGYPIQGQEELEANPSLAAGGPELLEKWKSDFKLRVVQHNIRVV
SKYYKQINTKRLAELLGLEEGEAERNVADMVCDGSLTYAKINRPAGVVSF
SSPKPAEEVLSEWNSDISQLLQLVERSCHLINKENMLHKLTG*
back to top

mRNA from alignment at D-mesarthrocarpus_Contig1000:9868..17204-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1000.6.2 ID=mRNA_D-mesarthrocarpus_Contig1000.6.2|Name=mRNA_D-mesarthrocarpus_Contig1000.6.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=7337bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1000:9868..17204- (Discosporangium mesarthrocarpum MT17_79)
TGAGAATGCCAGTCAGTGTTACCCTAAAATGTGTACTAACTTGCCCTAAT GTCACAAAATGCATTGTGCATCTGTATTATGCTGTCTATCTCATGTGAGG AATGGGAAGTAATGGAATAGGGTTAGGGTTAGCAGAACGATGAATGAGTC GTTGCTCTATCGAGAGATAAGGAGAGTTTGGTGTCATGTTTTTGGTTAGG GTTAGGTTCATGCTTGTTAAATTTATGGTAAAAAATCCCGAAATCGGCTT ATCCTTCCTCCCTTCAGGCAATGGGATGGCTTGATGAGACCCCAGACAGG AAGGTTCGCTCTGCACTCCTGGTCACTCTGAGAGATATAACTGATGGAAA GATATTTGTGGAGGCGGAAAGGGCAAAGCTCACACGCCTTCTGGCCAAGG TGTGAAATGGGAAGGGGGAAGTGGGAGAGAGGACAGGCCAGATTATTTTT TTGACACTCAGATGCTGTTTGATACAGTCTAATGACCTGAAACATGAGAC ATGGGACATGACCTGTGTATTTCTCAGTTATTTCAGAGTAGAGCTACCAT GAAGTAAAAGAGCTACCACAAAGTATAATCCTTACCTTTAGTGCTTCTCA AATCCATACACAGCAATGTTTTCCGGTACAAGAAATATATAGTACCGACA CATGTACAATATAGACATATATGTTTTGCTGTGAGAACCCAAGGAGCAGG AGATAGTCGTACTCTGTGATAGGCATATATTTTATACTGGTATATGCTGG TTTATGCTGGTATGTACTGGTATATGCTGGTATGCACTGGTATATGCTGG TATGCACTGGTATATGCTGGTATGTACTGGTATATGCTTGTATGTACTGG TGTATGCTGGTATATGCTGGTATATACTGGTATGTACGGGTATGTACGGG TATGTTGCTCCCCAGGCTTCATGCAGTAAACTGTGTACCATGTGCAACCA CCGTACACCTTACAGTTTATTCTGCCCTTTGAGTTGTGTGATTCAAGTTC TTGGTTCAGAGTATTTTAGAGAGAGAAGCCGAGTATTGTTTCAGTACTGT TCTACATATGGAGCCCTAGAGCTAACCCTTGCCCTTACCCTAGAGCTATA ACTTGAGTATTAATTGCAAATTCCACACTACTTTACTTTTTGCCTTTCCT ATATCTTCTCTCCACTTTCATCACCTTGTGCTAAGCCCATGACTGAAACA TGTTAGGTTAGGGTTAGCGTTGGGTTTGAAGTATTTCCTTATGTCTTGAT CCTCGAAGTCAGGCCTCTTTTTTTATGGTTAATAAATATATTTTATATTC TTTGAACTCTTGTTAATCCCACTCTGTTAATCCTTATGGGTGATTGGGCA TTTAGTTAAAGGAGGAGGATGGGGATGTGGCCGGCGCAGCAGATGTCCTA CAAGAGGTGCATGTGGAGACATATGGAGCTCTGGACAAGAAAGAGAAGGC TGATTTCATCCTTGAACAGGCATGAGTGACAGCAATTTTGTAAAAGCACA GAAATTAGTATTTTTCACAGAGTTTCAGGAATTCCACTAAATTCAGACCG TTTCATCTGTTTCATTTCGAAGCCAAGGCCCAATGGTCAGATTTGTCCAG ATAAAGTAAACCAAGCGCACAAAACAAATTGTGTTCTCACACTCTATGTT AATGGTCATCATTGTTTGAGATTTGTTCAGGAAAAAAATAAGAGTAATAT TATTTTGCAGACGGCATTATCCATGCAAATTTTGGAATCATTCAAGCAGC AAGAACATCTGATGGCAAATAGCGCTTGAAAAAGACTTTTCATGCTATCT TTTGCCTGGTCTAACCCTAACCCTAACCCTAATTCCAACTATCAGGCCTT CGCAGTTCACACGGCAATTTTTTAGACTTTAGCAGTTTGTAGGGTAACTT GGGGTTAAGGATAGGGCTTGGGTTAAGGTTAGGGTTAGGGTTGGGGTTAA ATGAAATGAGCCTCTTCTTGGGACAAAATATGAACAACTTAAACATAACC CTTTAGTAAGGGCTATGAATTTGTATTTAATAAATGTCAAGAATTCTTGC TTTGTCTTTGATGTTCTAGTGGGGCGTTGCAAGCGAGAGTTGCTCTTCAC TGTACTCAATGGATAGAGCTCTAATCCCATGGATGAACAGCACCTTGTAA CATCACCTGCCACCATTGCTGATCCTCTCCCTGACCCTAACCCTCGATGG ACTGTGTATGATGTTGTGTCAGATCCGTCTGACATTGGCAAAGAAGGATT ACGTTCGAGCCTTGATCCAGAGCAGGAAGATTAACCGAAAATTGCTTCTG GATGGAGATATGCAGGAAATCAAGGTGAATATGCAGGAAATCAAGGTGCA TATGCACTTCCACTCGACCAAATTGCCTGTCACACCCTAGCTTATTTTAA GACCAGGATGGGCTAGGGCATGCCAATCAGGAGGCATGAACAGGGGGGCA AGAGCAAGTGGTGAAGAGGATAGGTGACGTGGACAGATAGGGTTAGGGTT ACTTTTTATGTCAGCTTTTAGGTGGTAGGTTTGCATTTTGCTGACATCAG CATGCATCTTGGGTCTTCTCCCAGATTTTTTCAAATGGAACTGATTAGAT GTTTAGGGCTAGGGTTAGAACTATGTACTGATGTAACTTATGAGTAAACA GAATTCTGTACTGATGTTATTACATTTGCATGTGCAACAAGTCTGATGTG CTCTCAGATGATTTGCTCTCAGGACAGCGCAGTTTAAGTTAGGGTTAGGG TTAGTTACTGTACTGTCTCACTGCTTCGCCCATTGTTGAAATGAGACTGT TCCCATGTACTGTACCAGTAACTGATGTTTATTTTAATGGTATCTTTTTT TGCTCTTTTTCAGATTCGATACTACAGGCTCATGGTTCAGTACAACACAC ATGAGAAGGCACCTTTCGACCTGTGCCAGGTGAGTAGCAGCACAGATCAT GGACCTCCTGCGTTGTGCTGGTCACTAAGATGTAATCCATAACCTTAAAT ACTATATCCATAACCTAACCCTAACCCTAACCCTATGGATCTATGTTTTG TATGAAAACATGACTAAGCAGCCCGCACTTATAAATGTATCCCTTTTTTT CTGTTGATCGTCTCTTAAACAGGGACAAATGTTGATCGAACACATTGATC AAACAAATTGGTCAAGCAAAACACACAAGGGTCTACCTATTCTTCAAATG GCTACTACTATAAGATTCTAATAGATTTTTAGCAGTTTTACGCCGCTTGG GCTGTTTTCAGATTGTTTGTAGCAGATTTTCCTAAATCTGAATGCATTTT TTAAATCGATTGATCTGAAGTAGAAATATCTCAGAGCTGTAAAAAGATAA TCTATATTTCATCTTCAAGGAGGATTTGACAACCATTCTATATATCAAAA GAAATCTCGAAAAGATTTCCATGTGGATGTCCGTAGATCTGGGCTCCTCC AATTGTACAGGTCGCCATGGGCTGTTTCTGTAGATGCAATAGTCAGCTTC GAATGGGCTTCAAACAGTTTTGTCCAGTTTAGTTGACAGCCAGAGTTTAA TCTTGTTAGCATGTGGGGTGCAATTCAGTCCACTTGTCCTGTTCTATTTG AGCTTTACAAGTAACCCTAACCCTAACCCTACCTCAAGTAACCCTAACCC TAAGTTTAACAGTTGATTTGTCACGGGGTGGTTGTCTGAGATGACCAAGG GTAACTCTCGATCTTGCTTTTGTACAGAATGTGGAGGTTAATTGGTGGCA ACTAGTGTAAACTTACCCTAACCCTTACTCCAGAACATACTTGGTACAGG GATTAGATTGTGGGATTCCACCATGTGTATCGAATAATACGATGTTGCAT TATTTTTAAGGGTTAGGGTTAGGGTTAGGGTTTGACTAACCCTAAACCTA ACCCACCATGTCTATCGAATAATATGACGTTGCATTAGTTTTAAGAATTA TTGGAATAATAGGTAGCAGTCCCTCTGGTGGGTGCATGTTTAGAGCTCTA ATTTTAAGTGGCAAGTCGACAAATGCTTTTCCTGGCGTGGGACAAACCCT CAAGTCACAAAAAATCTTTGTTGCTCCAGACACTGATGGGATGGGATGTT ATGTGATGCCCTAAGCCTAAGAGTATATACTATAGAGGCTCTATGAGTCG AAAAGGCAGAAATAAAGCATTAAGAAGCACAAAACCTGGGACAGAAATAT GTCACTTGCCACTTCTGAAATACTCTAGAGTACTTTATATTGATGTTTTG AGAGTGCTTTGCGGACTACTTAGGGCTAGGGTTGTCACACAGCCTTCTCG TTCTTGGCTGCTGTTGCTCTGGGCATGGATTGAACAAAACCTAACTTGTC CTGTAGTGGATGCCTGGTTGGAAGCTTTTCATGTTTTTCATAAAGCATCT ACTGTTTATAATTATAGAAGTTTGTTTTGTTTTTCCTTTTTCCTTGGTGT TACTTTGTAAACACTATTTGTCCTGTTGTCCTCGTTGCTGTTTGGGCTAA TTATAACTAATTCAAAACTGCCAACTGTTATGTTTTGTCTTTGTGCAGGA TTTCCACTCCATCTATGATACTCCATCAATCAAGGAGGACAAGGGGCAGT GGCAAGAGCCCCTGCAGGCTGCAGTCCTCTTCCTAACACTCTCCCCATTC AGCAACCACCAGCAGGACATGCTCTTTAGGGTGGTGAAAGACACAAATCT GGATCAATTGCCTGCATATAAGGTACAGCACTAACCCTTACCCTAACCCT ACCACTATGTGCATGTATATCCTGGCCCTAAGCTCCTGCTTCCTACCGTG CATATGTTGGGTATATACTGGGTGTTTTTCTGTCTTACCGTCTGGCACAA ACCTACTTTCATTAATAGCAAATGACCTAGGCTTGTGAACTGGGTTAGGC AAACTTAAGGTTAGGGGTAGGGTTAGGTCTTGTTGATTTGTTTTGGTTAT TTAAGGGTAGACCACTGTATGCATCACTAGTATGCCACTTTTATATCACA ATCATGATAAATGGTATGGGCCTTTTGTGTCTTGATGTGGGATCCTTGGT GTGTGATCCCAAATTCCAATGTTTCGCTTCTTCTGGCAGGCCCTTGTGAA GCTCTTCACAACTCCAGAGATCATTGGCTATCCAATTCAAGGACAAGAAG AGCTTGAGGCCAATCCCAGCTTGGCTGCAGGAGGACCTGAACTCCTTGAA AAGTAAGGGACTGTCAAGCCTGTCATGTATATCATGTCTGGATGATAGTG CTTATTGTGGCCCACCACAGATGAAGTGATTGCACGGGCACAGGGCATTA GGGTTCACAAGGAAGGACTGACTAGATGTTGAGCTCTGATTGCACTTGCC CACCAAATTTGTTGAGATGTAGATTTATGTTTGTGTTGACATGCACTCCA ATCCAGGAAGACGGTTTTTATGTATCCAAGTATCCAAGTATGACCTTCAC GCATAGGCTCTTGATGTGCACTTGATGTGCTGTTGGCGTGTTCAAGACAG AAAGAATGCATATCATTGGATACATATTGCAGCACCAAAACAAGCATTTG CACAGGGCAGTAAGAAGCAGGAAAAAGAGAAGTTCTCTGATCCTTGCCCT AGCCCTAAGACAAATTCACGTACAGTGCAGCGACATTTCATGCCCACGAC ACGGAGCTAGTTGTCCTCCACACAGCTCACCTAACTCATATCCCACACCC TAACCCTAACCCTAACCCTTAGGTGGAAAAGTGACTTCAAGTTGCGCGTT GTGCAGCACAACATTCGAGTGGTGTCTAAATATTACAAGCAAATAAATAC CAAGCGCCTGGCAGAGTTGCTAGGATTGGAGGAGGGGGAGGCAGAGAGAA ATGTTGCTGGTGAGGTTAGGGTTATGATTTGGTTGGTGAGACCTTGCTGT TTTTCTGTTTTCTTTTTGGTTCACTGTTGGTTATTTTGAGTATCAGGTTC AGATGGTTTGAGTTCCTTTTTCACCATACAGAACTCAAAAGGTTTACACC GGTGTCAGCCTGATCTACCAGGTAATACAGTACCATGTTGTTTCTTTTTC TTTAACTGTCCTTCAGCCTCAGTAGCCCTTCATCTGACACTTAAATTGCC CTCCCTATCCCTAACCCTCATATTGCCTTACATTAGACATGGTTTGTGAT GGCTCTCTCACATATGCCAAGATCAATCGCCCTGCTGGTGTGGTGAGCTT CTCCAGTCCCAAGCCTGCAGAAGAGGTAAGATACATTTTAGGGTTAGGCT ACGAAGGCACAGGAAACATTATGTTGCCTCACCATACACAAAGGTTAGAC TCTAGGCACGTACTTGTACCTTCACTTTAAAGACACCATAGGGTTAGGGT TAGGTATTGCTTTGGGGCTTCTCAAATAGATACACAAGGAACCAATGTCG TACCCCAAAATAATCTACAATTTGGTGTGCAAGAGTGCATTTCGAGGGTG CCCCATGTTTGGAGCTGAGTACATTAACCAACTGTGACTCCAAATGTGAG TCATGAACAGTCTCTGTGGCACAAGGTTGAACCAATTTTTTCATCTTTTT GCATCGGTCTCTGTATGCTTTGTATCAGTTCTACATATGTTACATTGATT TTTGTATTGTTGTTTGCTCTTCCCTGTGCAGGTGCTGTCTGAATGGAACT CAGACATATCCCAGTTGCTGCAGCTTGTAGAGCGTAGCTGCCACTTGATC AACAAGGAAAATATGCTTCACAAGCTCACGGGCTGACTTTGAGTGATGCA TCGTTGTGGCTTGCTCATTTGAGTTCTTGGGGATTATGCAGCCAGCATTG GTGATCAAAACTCGACACTTTTATGATCCCCACTTGTAAAATGAGAATAT CCTTCATTGCTAAGAGTGTGGTTCTTATCTACCTGTGTGTAATGTAGTGC TCTAGTGCGGATGTTACCTAGTTGTGTACTTGGTTGACCAGTGCGTCGAC TTGTGTGTCATGAGGATGATCATCGATCATTACTGACATTCGCTTGCACC CACAGCAGCTGCTCACAAGTCAAAGTGATCAATTAAACAAAAAAAGTCAG GAGCGAAGTAGATGGCTATTCCCATCAATGCAACAAACAAATGAACTGTG TACGAAATGGACAATGAGTGAACTCACTCCCCTTATATGGACAATGCAGG GATTTTCCGGCACCCACATGCAATGTTGTGTCAGAAGTTGAGATATGTAT TAAAGACCAGGGTATGTTTAGCTATGCTATTGTCTCGTTGTGAAGTTATG ATATGTTACCTCTGCGTGCTGGATAAGCACCTGCTATGAAGGGGTAGAAC TGCTAATGTATACCGTATAATAGCAATGGTAATTCAT
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1000:9868..17204-

>mRNA_D-mesarthrocarpus_Contig1000.6.2 ID=mRNA_D-mesarthrocarpus_Contig1000.6.2|Name=mRNA_D-mesarthrocarpus_Contig1000.6.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1029bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1000:9868..17204- (Discosporangium mesarthrocarpum MT17_79)
ATGGGATGGCTTGATGAGACCCCAGACAGGAAGGTTCGCTCTGCACTCCT
GGTCACTCTGAGAGATATAACTGATGGAAAGATATTTGTGGAGGCGGAAA
GGGCAAAGCTCACACGCCTTCTGGCCAAGTTAAAGGAGGAGGATGGGGAT
GTGGCCGGCGCAGCAGATGTCCTACAAGAGGTGCATGTGGAGACATATGG
AGCTCTGGACAAGAAAGAGAAGGCTGATTTCATCCTTGAACAGATCCGTC
TGACATTGGCAAAGAAGGATTACGTTCGAGCCTTGATCCAGAGCAGGAAG
ATTAACCGAAAATTGCTTCTGGATGGAGATATGCAGGAAATCAAGATTCG
ATACTACAGGCTCATGGTTCAGTACAACACACATGAGAAGGCACCTTTCG
ACCTGTGCCAGGATTTCCACTCCATCTATGATACTCCATCAATCAAGGAG
GACAAGGGGCAGTGGCAAGAGCCCCTGCAGGCTGCAGTCCTCTTCCTAAC
ACTCTCCCCATTCAGCAACCACCAGCAGGACATGCTCTTTAGGGTGGTGA
AAGACACAAATCTGGATCAATTGCCTGCATATAAGGCCCTTGTGAAGCTC
TTCACAACTCCAGAGATCATTGGCTATCCAATTCAAGGACAAGAAGAGCT
TGAGGCCAATCCCAGCTTGGCTGCAGGAGGACCTGAACTCCTTGAAAAGT
GGAAAAGTGACTTCAAGTTGCGCGTTGTGCAGCACAACATTCGAGTGGTG
TCTAAATATTACAAGCAAATAAATACCAAGCGCCTGGCAGAGTTGCTAGG
ATTGGAGGAGGGGGAGGCAGAGAGAAATGTTGCTGACATGGTTTGTGATG
GCTCTCTCACATATGCCAAGATCAATCGCCCTGCTGGTGTGGTGAGCTTC
TCCAGTCCCAAGCCTGCAGAAGAGGTGCTGTCTGAATGGAACTCAGACAT
ATCCCAGTTGCTGCAGCTTGTAGAGCGTAGCTGCCACTTGATCAACAAGG
AAAATATGCTTCACAAGCTCACGGGCTGA
back to top