mRNA_D-mesarthrocarpus_Contig10245.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10245.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10245.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10245.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10245contigD-mesarthrocarpus_Contig10245:2558..4116 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size937
Hectar predicted targeting categoryother localisation
Exons2
Cds size936
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789166.9137757-CDS-D-mesarthrocarpus_Contig10245:2558..27491680789166.9137757-CDS-D-mesarthrocarpus_Contig10245:2558..2749Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10245 2559..2749 -
1680789166.927224-CDS-D-mesarthrocarpus_Contig10245:3371..41161680789166.927224-CDS-D-mesarthrocarpus_Contig10245:3371..4116Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10245 3372..4116 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10245.1.1prot_D-mesarthrocarpus_Contig10245.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10245 2559..4116 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10245.1.1

>prot_D-mesarthrocarpus_Contig10245.1.1 ID=prot_D-mesarthrocarpus_Contig10245.1.1|Name=mRNA_D-mesarthrocarpus_Contig10245.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=312bp
TSPGGIEPPLSQGGSGWLDSAGIEGADFGLLLCDGSRDNFPGIMGEAQAQ
QSVSEVPAGWGWFGESSVALLLPSPSPTPPPKTVVQAVPVCTVLAGEGGA
EEPVEEKSPSAVSETEAGAGAGALLATRTAAGQELSSLSERLVILAEGVA
ARPLIASMGAGEVLKSAEAATAAARALLGEALEECSDSGAEARAGAGAGV
KARGSAGVRGVKKREEITHLQRAVRFAAGRVLAAEQLLVGQAARLELAEA
QRATARASVETCRADLERSRAALSSAGEEGQTGVISYALGEAEASLEAAT
AVLSRPITGAYL
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mRNA from alignment at D-mesarthrocarpus_Contig10245:2558..4116-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10245.1.1 ID=mRNA_D-mesarthrocarpus_Contig10245.1.1|Name=mRNA_D-mesarthrocarpus_Contig10245.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1559bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10245:2558..4116- (Discosporangium mesarthrocarpum MT17_79)
ACATCACCTGGAGGAATTGAGCCCCCCCTTTCCCAGGGGGGTAGTGGTTG
GCTAGATTCAGCTGGCATCGAGGGGGCAGATTTCGGCCTGCTCCTGTGTG
ATGGAAGCAGGGACAACTTCCCTGGCATCATGGGGGAGGCTCAGGCTCAG
CAGAGTGTGAGTGAGGTCCCTGCGGGATGGGGGTGGTTCGGTGAGTCGTC
GGTAGCGCTGCTGTTGCCTTCACCGTCACCGACCCCACCCCCAAAGACTG
TGGTGCAGGCGGTACCTGTGTGCACAGTTTTGGCGGGGGAGGGAGGGGCG
GAGGAACCAGTCGAGGAAAAATCTCCGTCAGCAGTGTCCGAGACAGAGGC
AGGGGCAGGGGCAGGGGCGCTCTTGGCGACAAGGACAGCGGCAGGGCAAG
AGTTGAGCTCCCTGTCTGAGCGCCTGGTTATCCTGGCAGAGGGTGTTGCA
GCAAGGCCGCTGATTGCATCGATGGGGGCAGGGGAGGTCCTCAAATCAGC
TGAGGCTGCCACGGCAGCCGCGAGGGCCCTGTTGGGGGAGGCCCTGGAAG
AGTGCTCAGACTCTGGGGCTGAGGCCAGAGCAGGGGCAGGAGCAGGGGTC
AAAGCCAGGGGGAGTGCAGGGGTGAGGGGGGTCAAAAAAAGAGAGGAGAT
CACGCACCTTCAGCGAGCTGTTAGGTTCGCCGCTGGGAGGGTGCTAGCGG
CAGAGCAGTTGCTTGTGGGGCAGGCTGCTCGGCTTGAGCTTGCAGGTGGG
GACCTGAGAAGGTTTTGATGGAGCAATGGAGTTAGTGGACACTAAAGATT
ACTTATCCCACAGCTTTGTTGTTACTGGGGGGAGGCAGAACTGGAGGGCT
AACGGTCAAGGGTGTGGTAAAGAATGAGAGTTGAGAGATGGTGGGGAGTA
CTGAGGATTGCTGGCTTGTAAGGAAGAACTGTGCTGTAGTCCTGCCTGCC
CTGTTGGCACCATAAAGAGAGCACTGAAGGGTGCTGTTTTTTCAGGTTAC
TTTTTGCAGGGATGTGATGAAGGCACAACCTTCCAGAACCTTCCAGGTGT
GTGATGTGTCTAAACCAAGGGGCTAGGTCTATGCACAGAACTTGAAGTAA
ATAGTCTTGAGAATTTATCCCATATACTCAAAAGTAGAAGGAGCAAACTC
AAGATTGTGGTCGACAGACCACGTTGAGTAAGTAGGTCCTCTACGGTCCT
CAGCGCTCGACTAGAATCTCTTAACCATGAACACATTACAGCAAACTGCT
ACCTTCCCCCGCTTGCTTGTGCCGTCAACTTTCTGTGCCTTGGACCCCAC
CCTGGACCCCGCCCTGGACCCCGCACCCACCCACCCACCTCTCGCACCAA
AAACAAAAATGACACAGAGGCCCAACGAGCCACAGCAAGGGCATCTGTTG
AGACGTGCCGGGCAGACCTAGAGAGGTCCAGGGCCGCTCTGAGCTCGGCA
GGTGAAGAGGGACAGACAGGAGTGATTTCGTATGCCCTGGGTGAGGCAGA
AGCTTCTCTTGAGGCAGCAACTGCAGTTCTTAGTCGCCCTATCACCGGCG
CATACCTTG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10245:2558..4116-

>mRNA_D-mesarthrocarpus_Contig10245.1.1 ID=mRNA_D-mesarthrocarpus_Contig10245.1.1|Name=mRNA_D-mesarthrocarpus_Contig10245.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=936bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10245:2558..4116- (Discosporangium mesarthrocarpum MT17_79)
ACATCACCTGGAGGAATTGAGCCCCCCCTTTCCCAGGGGGGTAGTGGTTG
GCTAGATTCAGCTGGCATCGAGGGGGCAGATTTCGGCCTGCTCCTGTGTG
ATGGAAGCAGGGACAACTTCCCTGGCATCATGGGGGAGGCTCAGGCTCAG
CAGAGTGTGAGTGAGGTCCCTGCGGGATGGGGGTGGTTCGGTGAGTCGTC
GGTAGCGCTGCTGTTGCCTTCACCGTCACCGACCCCACCCCCAAAGACTG
TGGTGCAGGCGGTACCTGTGTGCACAGTTTTGGCGGGGGAGGGAGGGGCG
GAGGAACCAGTCGAGGAAAAATCTCCGTCAGCAGTGTCCGAGACAGAGGC
AGGGGCAGGGGCAGGGGCGCTCTTGGCGACAAGGACAGCGGCAGGGCAAG
AGTTGAGCTCCCTGTCTGAGCGCCTGGTTATCCTGGCAGAGGGTGTTGCA
GCAAGGCCGCTGATTGCATCGATGGGGGCAGGGGAGGTCCTCAAATCAGC
TGAGGCTGCCACGGCAGCCGCGAGGGCCCTGTTGGGGGAGGCCCTGGAAG
AGTGCTCAGACTCTGGGGCTGAGGCCAGAGCAGGGGCAGGAGCAGGGGTC
AAAGCCAGGGGGAGTGCAGGGGTGAGGGGGGTCAAAAAAAGAGAGGAGAT
CACGCACCTTCAGCGAGCTGTTAGGTTCGCCGCTGGGAGGGTGCTAGCGG
CAGAGCAGTTGCTTGTGGGGCAGGCTGCTCGGCTTGAGCTTGCAGAGGCC
CAACGAGCCACAGCAAGGGCATCTGTTGAGACGTGCCGGGCAGACCTAGA
GAGGTCCAGGGCCGCTCTGAGCTCGGCAGGTGAAGAGGGACAGACAGGAG
TGATTTCGTATGCCCTGGGTGAGGCAGAAGCTTCTCTTGAGGCAGCAACT
GCAGTTCTTAGTCGCCCTATCACCGGCGCATACCTT
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